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Started by upstream project "BIOFORMATS-test-repo" build number 34 originally caused by: Started by upstream project "Trigger" build number 38 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3 [BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins132327146242192458.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_4567_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:21:17,549 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:21:17,551 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 01:21:17,551 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:17,552 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:17,552 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:21:17,552 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:21:17,553 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:21:17,553 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:17,553 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:17,554 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:21:17,554 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:21:17,554 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:21:17,779 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:17,779 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:17,807 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:17,807 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:17,815 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:17,815 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:17,815 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:17,815 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:17,815 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 01:21:17,816 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 01:21:17,816 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 263 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-04-15 01:21:17,826] [main] java.version = 1.8.0_342 [testng] 01:21:17,830 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:17,830 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:17,875 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-15_01-21-17.log] [testng] 01:21:17,876 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-04-15 01:21:17,878] [main] testng.directory = /data [testng] [2024-04-15 01:21:17,878] [main] testng.configDirectory = /config [testng] [2024-04-15 01:21:17,890] [main] testng.multiplier = 1.0 [testng] [2024-04-15 01:21:17,890] [main] testng.in-memory = false [testng] [2024-04-15 01:21:17,890] [main] testng.allow-missing = false [testng] [2024-04-15 01:21:17,890] [main] user.language = fr [testng] [2024-04-15 01:21:17,890] [main] user.country = FR [testng] [2024-04-15 01:21:17,890] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-04-15 01:21:18,988] [main] ---------------------------------------- [testng] [2024-04-15 01:21:18,988] [main] Total files: 103 [testng] [2024-04-15 01:21:18,988] [main] Scan time: 1.098 s (10 ms/file) [testng] [2024-04-15 01:21:18,988] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-04-15 01:21:27,383] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] 01:21:27,384 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:21:27,384 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:27,385 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-15_01-21-27.log] [testng] 01:21:27,385 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1ef3e64e - End of configuration. [testng] [2024-04-15 01:21:27,412] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] 01:21:27,413 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:21:27,413 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:27,413 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-15_01-21-27.log] [testng] 01:21:27,414 |-INFO in ch.qos.logback.core.sift.SiftProcessor@605c2d3a - End of configuration. [testng] [2024-04-15 01:21:27,430] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] 01:21:27,430 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:21:27,430 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:27,431 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-15_01-21-27.log] [testng] 01:21:27,432 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3098e639 - End of configuration. [testng] [2024-04-15 01:21:27,450] [pool-1-thread-10] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] 01:21:27,451 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:21:27,451 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:27,451 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-15_01-21-27.log] [testng] 01:21:27,452 |-INFO in ch.qos.logback.core.sift.SiftProcessor@62b9cdda - End of configuration. [testng] [2024-04-15 01:21:27,492] [pool-1-thread-9] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] 01:21:27,492 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:21:27,492 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:27,493 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-15_01-21-27.log] [testng] 01:21:27,493 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3ec13fa3 - End of configuration. [testng] [2024-04-15 01:21:27,512] [pool-1-thread-8] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] 01:21:27,512 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:21:27,512 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:27,513 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-15_01-21-27.log] [testng] 01:21:27,514 |-INFO in ch.qos.logback.core.sift.SiftProcessor@151518e3 - End of configuration. [testng] [2024-04-15 01:21:27,702] [pool-1-thread-7] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] 01:21:27,702 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:21:27,702 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:27,703 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-15_01-21-27.log] [testng] 01:21:27,703 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6913b3b5 - End of configuration. [testng] [2024-04-15 01:21:27,718] [pool-1-thread-6] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] 01:21:27,718 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:21:27,718 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:27,719 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-15_01-21-27.log] [testng] 01:21:27,720 |-INFO in ch.qos.logback.core.sift.SiftProcessor@22432bac - End of configuration. [testng] [2024-04-15 01:21:27,734] [pool-1-thread-5] Initializing /data/jay/Carbon.34.dm3: [testng] 01:21:27,734 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:21:27,734 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:27,735 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-15_01-21-27.log] [testng] 01:21:27,735 |-INFO in ch.qos.logback.core.sift.SiftProcessor@208db5f5 - End of configuration. [testng] [2024-04-15 01:21:27,846] [pool-1-thread-4] Initializing /data/jay/dnasample1.dm3: [testng] 01:21:27,847 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:21:27,847 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:27,848 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-15_01-21-27.log] [testng] 01:21:27,848 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e8e8c23 - End of configuration. [testng] [2024-04-15 01:21:27,879] [pool-1-thread-3] Initializing /data/jay/camtest1.dm3: [testng] 01:21:27,880 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:21:27,880 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:27,880 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-15_01-21-27.log] [testng] 01:21:27,881 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7312362b - End of configuration. [testng] [2024-04-15 01:21:27,909] [pool-1-thread-2] Initializing /data/jay/ViewDMtest.dm3: [testng] 01:21:27,909 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:21:27,909 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:27,910 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-15_01-21-27.log] [testng] 01:21:27,910 |-INFO in ch.qos.logback.core.sift.SiftProcessor@61d78681 - End of configuration. [testng] [2024-04-15 01:21:30,094] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2024-04-15 01:21:30,111] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [2024-04-15 01:21:30,656] [pool-1-thread-6] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2024-04-15 01:21:31,250] [pool-1-thread-8] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2024-04-15 01:21:31,321] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2024-04-15 01:21:32,350] [pool-1-thread-11] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2024-04-15 01:21:32,361] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-04-15 01:21:33,049] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] [2024-04-15 01:21:33,530] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-04-15 01:21:34,258] [pool-1-thread-7] Initializing /data/melissa/annotation-test.dm3: [testng] [2024-04-15 01:21:34,469] [pool-1-thread-4] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2024-04-15 01:21:34,477] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] [2024-04-15 01:21:34,527] [pool-1-thread-7] Initializing /data/ofra/lowloss.dm3: [testng] [2024-04-15 01:21:34,629] [pool-1-thread-3] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2024-04-15 01:21:34,640] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2024-04-15 01:21:34,808] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-04-15 01:21:34,911] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] [2024-04-15 01:21:35,337] [pool-1-thread-4] Initializing /data/jay/DMtest2.dm3: [testng] [2024-04-15 01:21:35,505] [pool-1-thread-2] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-04-15 01:21:35,600] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2024-04-15 01:21:36,673] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2024-04-15 01:21:36,781] [pool-1-thread-9] Initializing /data/qa-7642/8.dm4: [testng] [2024-04-15 01:21:37,205] [pool-1-thread-6] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2024-04-15 01:21:38,305] [pool-1-thread-9] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2024-04-15 01:21:39,297] [pool-1-thread-11] Initializing /data/melissa/annotation-test.tif: [testng] [2024-04-15 01:21:39,388] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2024-04-15 01:21:39,760] [pool-1-thread-7] Initializing /data/qa-21761/example.dm4: [testng] [2024-04-15 01:21:39,856] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2024-04-15 01:21:39,864] [pool-1-thread-8] Initializing /data/jay/recAmaghi.dm3: [testng] [2024-04-15 01:21:41,393] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-04-15 01:21:41,437] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] [2024-04-15 01:21:41,583] [pool-1-thread-1] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-04-15 01:21:42,171] [pool-1-thread-3] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2024-04-15 01:21:42,235] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2024-04-15 01:21:42,256] [pool-1-thread-9] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] [2024-04-15 01:21:42,360] [pool-1-thread-5] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-04-15 01:21:42,788] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2024-04-15 01:21:42,841] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-04-15 01:21:43,155] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-04-15 01:21:43,300] [pool-1-thread-4] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-04-15 01:21:43,594] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2024-04-15 01:21:45,521] [pool-1-thread-8] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-04-15 01:21:45,661] [pool-1-thread-9] Initializing /data/chip/Nanogold-1.dm3: [testng] [2024-04-15 01:21:46,208] [pool-1-thread-1] Initializing /data/jay/smallerfile.dm3: [testng] [2024-04-15 01:21:46,371] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2024-04-15 01:21:46,629] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-04-15 01:21:47,063] [pool-1-thread-1] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-04-15 01:21:47,891] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] [2024-04-15 01:21:48,967] [pool-1-thread-9] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2024-04-15 01:21:49,606] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-04-15 01:21:49,800] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2024-04-15 01:21:50,059] [pool-1-thread-6] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-04-15 01:21:50,206] [pool-1-thread-4] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2024-04-15 01:21:50,289] [pool-1-thread-5] Initializing /data/samples/test-tiles.dm3: [testng] [2024-04-15 01:21:50,334] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2024-04-15 01:21:50,725] [pool-1-thread-5] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2024-04-15 01:21:51,125] [pool-1-thread-4] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-04-15 01:21:52,980] [pool-1-thread-9] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2024-04-15 01:21:54,199] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-04-15 01:21:55,192] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2024-04-15 01:21:56,192] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] [2024-04-15 01:21:56,309] [pool-1-thread-4] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2024-04-15 01:21:56,440] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [2024-04-15 01:21:56,644] [pool-1-thread-6] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-04-15 01:21:57,392] [pool-1-thread-8] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-04-15 01:21:57,428] [pool-1-thread-9] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-04-15 01:21:57,843] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2024-04-15 01:21:58,080] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-04-15 01:21:58,558] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2024-04-15 01:21:59,121] [pool-1-thread-5] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-04-15 01:22:00,325] [pool-1-thread-8] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2024-04-15 01:22:00,433] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-04-15 01:22:00,922] [pool-1-thread-12] Initializing /data/jay/DMtest.dm3: [testng] [2024-04-15 01:22:01,990] [pool-1-thread-10] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] [2024-04-15 01:22:02,319] [pool-1-thread-4] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2024-04-15 01:22:04,082] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-04-15 01:22:04,459] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-04-15 01:22:04,892] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2024-04-15 01:22:05,019] [pool-1-thread-5] Initializing /data/jay/dnasample.tif: [testng] [2024-04-15 01:22:07,430] [pool-1-thread-9] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2024-04-15 01:22:07,481] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2024-04-15 01:22:07,530] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-04-15 01:22:08,089] [pool-1-thread-12] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2024-04-15 01:22:08,209] [pool-1-thread-9] Initializing /data/jay/samples/APC2a-e4.tif: [testng] [2024-04-15 01:22:08,599] [pool-1-thread-4] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-04-15 01:22:09,733] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 15 seconds Finished: SUCCESS