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Started by upstream project "BIOFORMATS-test-repo" build number 34 originally caused by: Started by upstream project "Trigger" build number 38 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins16735517284088307942.sh + '[' olympus-oir = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_4575_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:21:39,153 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:21:39,155 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 01:21:39,155 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:39,156 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:39,156 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:21:39,157 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:21:39,157 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:21:39,157 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:39,158 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:39,158 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:21:39,158 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:21:39,158 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:21:39,443 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:39,444 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:39,479 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:39,479 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:39,490 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:39,490 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:39,490 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:39,491 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:39,491 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 01:21:39,492 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 01:21:39,492 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 334 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-04-15 01:21:39,504] [main] java.version = 1.8.0_342 [testng] 01:21:39,508 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:39,508 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:39,555 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-15_01-21-39.log] [testng] 01:21:39,557 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-04-15 01:21:39,560] [main] testng.directory = /data [testng] [2024-04-15 01:21:39,560] [main] testng.configDirectory = /config [testng] [2024-04-15 01:21:39,578] [main] testng.multiplier = 1.0 [testng] [2024-04-15 01:21:39,578] [main] testng.in-memory = false [testng] [2024-04-15 01:21:39,578] [main] testng.allow-missing = false [testng] [2024-04-15 01:21:39,578] [main] user.language = fr [testng] [2024-04-15 01:21:39,578] [main] user.country = FR [testng] [2024-04-15 01:21:39,578] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-04-15 01:21:58,007] [main] ---------------------------------------- [testng] [2024-04-15 01:21:58,008] [main] Total files: 283 [testng] [2024-04-15 01:21:58,008] [main] Scan time: 18.428 s (65 ms/file) [testng] [2024-04-15 01:21:58,008] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 186 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-04-15 01:31:14,094] [pool-1-thread-1] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets: [testng] 01:31:14,094 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:31:14,095 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:14,096 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-15_01-31-14.log] [testng] 01:31:14,096 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35ef212d - End of configuration. [testng] [2024-04-15 01:31:14,121] [pool-1-thread-12] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif: [testng] 01:31:14,122 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:31:14,122 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:14,122 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-15_01-31-14.log] [testng] 01:31:14,123 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c30b2d - End of configuration. [testng] [2024-04-15 01:31:14,245] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: [testng] 01:31:14,245 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:31:14,245 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:14,246 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-15_01-31-14.log] [testng] 01:31:14,247 |-INFO in ch.qos.logback.core.sift.SiftProcessor@27c59422 - End of configuration. [testng] [2024-04-15 01:31:14,309] [pool-1-thread-10] Initializing /data/qa-17270/stack1.ome.tif: [testng] 01:31:14,309 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:31:14,309 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:14,310 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-15_01-31-14.log] [testng] 01:31:14,311 |-INFO in ch.qos.logback.core.sift.SiftProcessor@258f4143 - End of configuration. [testng] [2024-04-15 01:31:14,611] [pool-1-thread-9] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: [testng] 01:31:14,612 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:31:14,612 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:14,613 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-15_01-31-14.log] [testng] 01:31:14,614 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5eb1b740 - End of configuration. [testng] [2024-04-15 01:31:14,735] [pool-1-thread-8] Initializing /data/public/etienne/coupe shg stack_0001.oir: [testng] 01:31:14,736 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:31:14,736 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:14,736 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-15_01-31-14.log] [testng] 01:31:14,737 |-INFO in ch.qos.logback.core.sift.SiftProcessor@223fad19 - End of configuration. [testng] [2024-04-15 01:31:15,061] [pool-1-thread-7] Initializing /data/qa-16881/P10D1 20150729_0019.oir: [testng] 01:31:15,061 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:31:15,061 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:15,062 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-15_01-31-15.log] [testng] 01:31:15,062 |-INFO in ch.qos.logback.core.sift.SiftProcessor@44deeb35 - End of configuration. [testng] [2024-04-15 01:31:15,312] [pool-1-thread-6] Initializing /data/qa-16881/P10D1 20150729.oir: [testng] 01:31:15,313 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:31:15,313 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:15,313 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-15_01-31-15.log] [testng] 01:31:15,314 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5421f552 - End of configuration. [testng] [2024-04-15 01:31:15,645] [pool-1-thread-5] Initializing /data/olympus/spectral_scan_XYL.oir: [testng] 01:31:15,645 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:31:15,645 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:15,646 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-15_01-31-15.log] [testng] 01:31:15,647 |-INFO in ch.qos.logback.core.sift.SiftProcessor@415b1e5b - End of configuration. [testng] [2024-04-15 01:31:16,274] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif: [testng] 01:31:16,274 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:31:16,274 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:16,275 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-15_01-31-16.log] [testng] 01:31:16,276 |-INFO in ch.qos.logback.core.sift.SiftProcessor@599ace23 - End of configuration. [testng] [2024-04-15 01:31:16,353] [pool-1-thread-3] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: [testng] 01:31:16,353 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:31:16,353 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:16,354 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-15_01-31-16.log] [testng] 01:31:16,354 |-INFO in ch.qos.logback.core.sift.SiftProcessor@50cbddc0 - End of configuration. [testng] [2024-04-15 01:31:16,463] [pool-1-thread-2] Initializing /data/qa-17270/alexa488.oir: [testng] 01:31:16,464 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:31:16,464 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:16,464 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-15_01-31-16.log] [testng] 01:31:16,465 |-INFO in ch.qos.logback.core.sift.SiftProcessor@ce384 - End of configuration. [testng] [2024-04-15 01:31:19,991] [pool-1-thread-11] Initializing /data/olympus/2017-04-20/Clipboard.tif: [testng] [2024-04-15 01:31:20,034] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: [testng] [2024-04-15 01:31:20,086] [pool-1-thread-4] Initializing /data/olympus/Clipboard-XYZt.tif: [testng] [2024-04-15 01:31:20,152] [pool-1-thread-3] Initializing /data/qa-16881/P10-50 D2.ome.tif: [testng] [2024-04-15 01:31:20,599] [pool-1-thread-1] Initializing /data/qa-17270/Clipboard-alexa488.tif: [testng] [2024-04-15 01:31:20,713] [pool-1-thread-2] Initializing /data/public/etienne/Clipboard-venus stack.tif: [testng] [2024-04-15 01:31:21,647] [pool-1-thread-11] Initializing /data/qa-17270/image1.oir: [testng] [2024-04-15 01:31:21,733] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif: [testng] [2024-04-15 01:31:22,288] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: [testng] [2024-04-15 01:31:22,641] [pool-1-thread-4] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir: [testng] [2024-04-15 01:31:24,140] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: [testng] [2024-04-15 01:31:24,323] [pool-1-thread-7] Initializing /data/qa-16871/Clipboard.tif: [testng] [2024-04-15 01:31:24,371] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: [testng] [2024-04-15 01:31:24,416] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: [testng] [2024-04-15 01:31:24,459] [pool-1-thread-1] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif: [testng] [2024-04-15 01:31:24,544] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif: [testng] [2024-04-15 01:31:25,412] [pool-1-thread-8] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: [testng] [2024-04-15 01:31:25,515] [pool-1-thread-11] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: [testng] [2024-04-15 01:31:26,045] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: [testng] [2024-04-15 01:31:26,094] [pool-1-thread-9] Initializing /data/qa-17270/alexa488.ome.tif: [testng] [2024-04-15 01:31:27,044] [pool-1-thread-7] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info: [testng] [2024-04-15 01:31:31,322] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: [testng] [2024-04-15 01:31:31,513] [pool-1-thread-6] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: [testng] [2024-04-15 01:31:32,208] [pool-1-thread-1] Initializing /data/qa-17335/OSR-Z.oir: [testng] [2024-04-15 01:31:32,787] [pool-1-thread-12] Initializing /data/qa-17270/stack1.oir: [testng] [2024-04-15 01:31:36,076] [pool-1-thread-3] Initializing /data/olympus/40X_4CH_XY.oir: [testng] [2024-04-15 01:31:36,276] [pool-1-thread-8] Initializing /data/olympus/Stitched_XYZ.vsi: [testng] [2024-04-15 01:31:37,354] [pool-1-thread-10] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: [testng] [2024-04-15 01:31:41,150] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: [testng] [2024-04-15 01:31:41,451] [pool-1-thread-9] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: [testng] [2024-04-15 01:31:42,463] [pool-1-thread-2] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: [testng] [2024-04-15 01:31:42,976] [pool-1-thread-8] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: [testng] [2024-04-15 01:31:52,884] [pool-1-thread-1] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir: [testng] [2024-04-15 01:31:53,333] [pool-1-thread-6] Initializing /data/qa-21508/Stitch_A01_G008.oir: [testng] [2024-04-15 01:31:53,579] [pool-1-thread-9] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif: [testng] [2024-04-15 01:31:54,398] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir: [testng] [2024-04-15 01:31:54,648] [pool-1-thread-5] Initializing /data/qa-17331/60x zstack RS.ome.tif: [testng] [2024-04-15 01:31:55,268] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: [testng] [2024-04-15 01:31:55,584] [pool-1-thread-3] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif: [testng] [2024-04-15 01:31:55,934] [pool-1-thread-11] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets: [testng] [2024-04-15 01:31:55,989] [pool-1-thread-9] Initializing /data/olympus/calcium sparks_XYt.ome.tif: [testng] [2024-04-15 01:31:56,371] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif: [testng] [2024-04-15 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Initializing /data/cudmore/20190401__0005.oir: [testng] [2024-04-15 01:38:21,620] [pool-1-thread-6] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir: [testng] [2024-04-15 01:39:18,175] [pool-1-thread-3] Initializing /data/public/etienne/amy slice z stack_0001.oir: [testng] [2024-04-15 01:39:18,586] [pool-1-thread-1] Initializing /data/qa-17270/image1.ome.tif: [testng] [2024-04-15 01:39:18,633] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: [testng] [2024-04-15 01:39:18,689] [pool-1-thread-10] Initializing /data/qa-17919/f10187.oir: [testng] [2024-04-15 01:39:43,444] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: [testng] [2024-04-15 01:39:43,574] [pool-1-thread-11] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info: [testng] [2024-04-15 01:39:43,699] [pool-1-thread-8] Initializing /data/public/etienne/amy slice z 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01:40:04,412] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif: [testng] [2024-04-15 01:40:05,456] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif: [testng] [2024-04-15 01:40:06,265] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi: [testng] [2024-04-15 01:40:07,530] [pool-1-thread-8] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif: [testng] [2024-04-15 01:40:07,809] [pool-1-thread-11] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: [testng] [2024-04-15 01:40:08,894] [pool-1-thread-8] Initializing /data/olympus/XYZt.ome.tif: [testng] [2024-04-15 01:40:15,456] [pool-1-thread-1] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: [testng] [2024-04-15 01:40:16,775] [pool-1-thread-9] Initializing /data/qa-16881/P10D1 20150729_0024.oir: [testng] [2024-04-15 01:40:18,252] 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[pool-1-thread-8] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif: [testng] [2024-04-15 01:40:32,933] [pool-1-thread-1] Initializing /data/olympus/XYZt.oir: [testng] [2024-04-15 01:40:50,528] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: [testng] [2024-04-15 01:40:51,646] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: [testng] [2024-04-15 01:40:51,923] [pool-1-thread-8] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: [testng] [2024-04-15 01:40:52,958] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir: [testng] [2024-04-15 01:40:53,587] [pool-1-thread-8] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: [testng] [2024-04-15 01:40:54,862] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: [testng] [2024-04-15 01:40:55,954] [pool-1-thread-7] Initializing /data/olympus/spectral_scan_XYL.ome.tif: [testng] [2024-04-15 01:40:56,648] [pool-1-thread-9] Initializing /data/qa-17335/stimulation_0001_LSM.oir: [testng] [2024-04-15 01:41:01,120] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: [testng] [2024-04-15 01:41:02,875] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: [testng] [2024-04-15 01:41:03,568] [pool-1-thread-8] Initializing /data/qa-16871/XY_0003.oir: [testng] [2024-04-15 01:41:04,004] [pool-1-thread-7] Initializing /data/qa-16871/XY_0003.ome.tif: [testng] [2024-04-15 01:41:04,801] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: [testng] [2024-04-15 01:41:08,478] [pool-1-thread-7] Initializing /data/qa-17409/Clipboard.tif: [testng] [2024-04-15 01:41:08,574] [pool-1-thread-3] Initializing /data/qa-17917/f10010.oir: [testng] [2024-04-15 01:42:29,819] [pool-1-thread-7] Initializing /data/qa-17335/1.oir: [testng] [2024-04-15 01:42:30,872] [pool-1-thread-7] Initializing /data/qa-17331/Clipboard.tif: [testng] [2024-04-15 01:42:32,897] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif: [testng] [2024-04-15 01:42:34,574] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif: [testng] [2024-04-15 01:42:35,568] [pool-1-thread-7] Initializing /data/public/etienne/venus stack.oir: [testng] [2024-04-15 01:42:48,902] [pool-1-thread-9] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: [testng] 02:35:24,385 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:35:24,385 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:35:24,386 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-15_02-35-24.log] [testng] 02:35:24,387 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2e3fa7a7 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 9858, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 73 minutes 49 seconds Finished: SUCCESS