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Started by upstream project "BIOFORMATS-test-repo" build number 290 originally caused by: Started by upstream project "Trigger" build number 309 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins16856853456196509906.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_45752_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 00:21:27,213 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:21:27,214 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service. [testng] 00:21:27,214 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:21:27,215 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:21:27,216 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:21:27,216 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:21:27,217 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:21:27,217 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:21:27,217 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:21:27,218 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:21:27,218 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:21:27,218 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:21:27,415 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:21:27,415 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:21:27,440 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:21:27,440 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:21:27,446 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:21:27,446 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:21:27,446 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:21:27,447 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:21:27,447 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration. [testng] 00:21:27,448 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point [testng] 00:21:27,448 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 231 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-14 00:21:27,457] [main] java.version = 11.0.16 [testng] 00:21:27,460 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:21:27,460 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:27,503 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-14_00-21-27.log] [testng] 00:21:27,504 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2024-12-14 00:21:27,506] [main] testng.directory = /data [testng] [2024-12-14 00:21:27,506] [main] testng.configDirectory = /config [testng] [2024-12-14 00:21:27,517] [main] testng.multiplier = 1.0 [testng] [2024-12-14 00:21:27,519] [main] testng.in-memory = false [testng] [2024-12-14 00:21:27,519] [main] testng.allow-missing = false [testng] [2024-12-14 00:21:27,519] [main] user.language = en [testng] [2024-12-14 00:21:27,519] [main] user.country = ${user.country} [testng] [2024-12-14 00:21:27,519] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-12-14 00:21:31,396] [main] ---------------------------------------- [testng] [2024-12-14 00:21:31,396] [main] Total files: 103 [testng] [2024-12-14 00:21:31,396] [main] Scan time: 3.877 s (37 ms/file) [testng] [2024-12-14 00:21:31,396] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-14 00:21:57,803] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] 00:21:57,803 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:21:57,804 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:57,805 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-14_00-21-57.log] [testng] 00:21:57,806 |-INFO in ch.qos.logback.core.sift.SiftProcessor@da711f8 - End of configuration. [testng] [2024-12-14 00:21:57,933] [pool-1-thread-12] Initializing /data/jay/smallerfile.dm3: [testng] 00:21:57,933 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:21:57,933 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:57,934 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-14_00-21-57.log] [testng] 00:21:57,934 |-INFO in ch.qos.logback.core.sift.SiftProcessor@409059a8 - End of configuration. [testng] [2024-12-14 00:21:58,044] [pool-1-thread-11] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] 00:21:58,044 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:21:58,044 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:58,045 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-14_00-21-58.log] [testng] 00:21:58,045 |-INFO in ch.qos.logback.core.sift.SiftProcessor@64b7ea9 - End of configuration. [testng] [2024-12-14 00:21:59,180] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] 00:21:59,180 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:21:59,180 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:59,181 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-14_00-21-59.log] [testng] 00:21:59,181 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f07fc19 - End of configuration. [testng] [2024-12-14 00:21:59,359] [pool-1-thread-9] Initializing /data/jay/biosamplefullframe.dm3: [testng] 00:21:59,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:21:59,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:59,360 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-14_00-21-59.log] [testng] 00:21:59,360 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2404a842 - End of configuration. [testng] [2024-12-14 00:21:59,517] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] 00:21:59,517 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:21:59,517 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:59,518 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-14_00-21-59.log] [testng] 00:21:59,518 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2fdc1a62 - End of configuration. [testng] [2024-12-14 00:21:59,650] [pool-1-thread-7] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] 00:21:59,650 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:21:59,650 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:59,651 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-14_00-21-59.log] [testng] 00:21:59,651 |-INFO in ch.qos.logback.core.sift.SiftProcessor@ee168cb - End of configuration. [testng] [2024-12-14 00:22:00,608] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] 00:22:00,608 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:22:00,608 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:00,608 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-14_00-22-00.log] [testng] 00:22:00,609 |-INFO in ch.qos.logback.core.sift.SiftProcessor@68b25825 - End of configuration. [testng] [2024-12-14 00:22:00,832] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] 00:22:00,832 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:22:00,832 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:00,832 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-14_00-22-00.log] [testng] 00:22:00,833 |-INFO in ch.qos.logback.core.sift.SiftProcessor@67fbeca0 - End of configuration. [testng] [2024-12-14 00:22:01,062] [pool-1-thread-4] Initializing /data/melissa/annotation-test.tif: [testng] 00:22:01,063 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:22:01,063 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:01,063 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-14_00-22-01.log] [testng] 00:22:01,064 |-INFO in ch.qos.logback.core.sift.SiftProcessor@10221a1d - End of configuration. [testng] [2024-12-14 00:22:01,892] [pool-1-thread-3] Initializing /data/jay/Carbon.34.dm3: [testng] 00:22:01,892 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:22:01,892 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:01,892 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-14_00-22-01.log] [testng] 00:22:01,893 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5000dd6c - End of configuration. [testng] [2024-12-14 00:22:02,001] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] 00:22:02,001 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:22:02,001 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:02,001 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-14_00-22-02.log] [testng] 00:22:02,002 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1753cd3f - End of configuration. [testng] [2024-12-14 00:22:05,809] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-12-14 00:22:06,242] [pool-1-thread-12] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2024-12-14 00:22:06,877] [pool-1-thread-10] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2024-12-14 00:22:07,044] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] [2024-12-14 00:22:08,380] [pool-1-thread-3] Initializing /data/jay/dnasample.tif: [testng] [2024-12-14 00:22:09,143] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-12-14 00:22:09,337] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2024-12-14 00:22:09,458] [pool-1-thread-8] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2024-12-14 00:22:10,364] [pool-1-thread-5] Initializing /data/jay/DMtest2.dm3: [testng] [2024-12-14 00:22:12,369] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2024-12-14 00:22:12,491] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-12-14 00:22:12,948] [pool-1-thread-1] Initializing /data/jay/recAmaghi.dm3: [testng] [2024-12-14 00:22:14,392] [pool-1-thread-9] Initializing /data/jay/ViewDMtest.dm3: [testng] [2024-12-14 00:22:15,129] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-12-14 00:22:15,464] [pool-1-thread-10] Initializing /data/samples/test-tiles.dm3: [testng] [2024-12-14 00:22:15,823] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2024-12-14 00:22:16,869] [pool-1-thread-8] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-12-14 00:22:17,047] [pool-1-thread-4] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-12-14 00:22:17,297] [pool-1-thread-5] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] [2024-12-14 00:22:18,432] [pool-1-thread-10] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-12-14 00:22:19,643] [pool-1-thread-12] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2024-12-14 00:22:20,253] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-12-14 00:22:20,499] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-12-14 00:22:21,183] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2024-12-14 00:22:21,533] [pool-1-thread-4] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2024-12-14 00:22:21,764] [pool-1-thread-7] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-12-14 00:22:22,975] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2024-12-14 00:22:23,632] [pool-1-thread-1] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] [2024-12-14 00:22:23,988] [pool-1-thread-3] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-12-14 00:22:25,266] [pool-1-thread-6] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-12-14 00:22:26,972] [pool-1-thread-12] Initializing /data/melissa/annotation-test.dm3: [testng] [2024-12-14 00:22:27,722] [pool-1-thread-8] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2024-12-14 00:22:29,563] [pool-1-thread-11] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-12-14 00:22:29,917] [pool-1-thread-4] Initializing /data/ofra/lowloss.dm3: [testng] [2024-12-14 00:22:30,129] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] [2024-12-14 00:22:30,699] [pool-1-thread-12] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-12-14 00:22:31,148] [pool-1-thread-1] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-12-14 00:22:32,727] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [2024-12-14 00:22:33,477] [pool-1-thread-10] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-12-14 00:22:34,877] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] [2024-12-14 00:22:36,548] [pool-1-thread-3] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2024-12-14 00:22:37,361] [pool-1-thread-4] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] [2024-12-14 00:22:37,597] [pool-1-thread-12] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-12-14 00:22:38,292] [pool-1-thread-1] Initializing /data/jay/dnasample1.dm3: [testng] [2024-12-14 00:22:38,469] [pool-1-thread-9] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2024-12-14 00:22:39,138] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-12-14 00:22:39,326] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [2024-12-14 00:22:39,598] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2024-12-14 00:22:40,024] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2024-12-14 00:22:40,253] [pool-1-thread-2] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-12-14 00:22:41,578] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2024-12-14 00:22:43,431] [pool-1-thread-11] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2024-12-14 00:22:44,329] [pool-1-thread-10] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2024-12-14 00:22:44,427] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-12-14 00:22:44,695] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2024-12-14 00:22:44,919] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2024-12-14 00:22:45,152] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-12-14 00:22:45,634] [pool-1-thread-7] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] [2024-12-14 00:22:47,640] [pool-1-thread-1] Initializing /data/qa-7642/8.dm4: [testng] [2024-12-14 00:22:47,844] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2024-12-14 00:22:48,155] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] [2024-12-14 00:22:48,939] [pool-1-thread-7] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] [2024-12-14 00:22:50,086] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] [2024-12-14 00:22:50,276] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-12-14 00:22:51,237] [pool-1-thread-12] Initializing /data/qa-21761/example.dm4: [testng] [2024-12-14 00:22:51,458] [pool-1-thread-3] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-12-14 00:22:53,317] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2024-12-14 00:22:54,067] [pool-1-thread-4] Initializing /data/jay/samples/APC2a-e4.tif: [testng] [2024-12-14 00:22:56,182] [pool-1-thread-2] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-12-14 00:22:56,598] [pool-1-thread-1] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2024-12-14 00:22:57,278] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2024-12-14 00:22:57,632] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-12-14 00:22:57,902] [pool-1-thread-11] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2024-12-14 00:23:01,708] [pool-1-thread-3] Initializing /data/jay/camtest1.dm3: [testng] [2024-12-14 00:23:02,091] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2024-12-14 00:23:02,914] [pool-1-thread-2] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2024-12-14 00:23:05,213] [pool-1-thread-8] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2024-12-14 00:23:05,997] [pool-1-thread-9] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-12-14 00:23:08,207] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2024-12-14 00:23:08,810] [pool-1-thread-1] Initializing /data/chip/Nanogold-1.dm3: [testng] [2024-12-14 00:23:09,662] [pool-1-thread-7] Initializing /data/jay/DMtest.dm3: [testng] [2024-12-14 00:23:10,836] [pool-1-thread-6] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2024-12-14 00:23:11,253] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-12-14 00:23:11,648] [pool-1-thread-8] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2024-12-14 00:23:12,053] [pool-1-thread-10] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2024-12-14 00:23:14,909] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 2 minutes 2 seconds Finished: SUCCESS