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Started by upstream project "BIOFORMATS-test-repo" build number 290 originally caused by: Started by upstream project "Trigger" build number 309 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins7585888641729498685.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_45791_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 00:58:55,771 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:58:55,772 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service. [testng] 00:58:55,772 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:58:55,773 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:58:55,774 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:58:55,775 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:58:55,775 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:58:55,775 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:58:55,776 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:58:55,777 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:58:55,777 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:58:55,777 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:58:55,971 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:58:55,971 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:58:55,993 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:58:55,993 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:58:55,999 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:58:55,999 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:58:55,999 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:58:55,999 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:58:55,999 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration. [testng] 00:58:56,000 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point [testng] 00:58:56,000 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 224 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-14 00:58:56,010] [main] java.version = 11.0.16 [testng] 00:58:56,014 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:58:56,014 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:58:56,062 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-14_00-58-56.log] [testng] 00:58:56,064 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2024-12-14 00:58:56,066] [main] testng.directory = /data [testng] [2024-12-14 00:58:56,067] [main] testng.configDirectory = /config [testng] [2024-12-14 00:58:56,079] [main] testng.multiplier = 1.0 [testng] [2024-12-14 00:58:56,081] [main] testng.in-memory = false [testng] [2024-12-14 00:58:56,081] [main] testng.allow-missing = false [testng] [2024-12-14 00:58:56,081] [main] user.language = en [testng] [2024-12-14 00:58:56,081] [main] user.country = ${user.country} [testng] [2024-12-14 00:58:56,081] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-12-14 00:59:36,566] [main] ---------------------------------------- [testng] [2024-12-14 00:59:36,567] [main] Total files: 259 [testng] [2024-12-14 00:59:36,567] [main] Scan time: 40.484 s (156 ms/file) [testng] [2024-12-14 00:59:36,567] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-14 01:16:56,833] [pool-1-thread-1] Initializing /data/brian/CagedATP CaG7.oib: [testng] 01:16:56,834 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:16:56,834 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:16:56,837 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-14_01-16-56.log] [testng] 01:16:56,837 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3da434c8 - End of configuration. [testng] [2024-12-14 01:16:58,036] [pool-1-thread-12] Initializing /data/aryeh/030408 2 1.oib: [testng] 01:16:58,036 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:16:58,036 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:16:58,037 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-14_01-16-58.log] [testng] 01:16:58,037 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e4f7f62 - End of configuration. [testng] [2024-12-14 01:16:59,572] [pool-1-thread-11] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] 01:16:59,573 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:16:59,573 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:16:59,574 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-14_01-16-59.log] [testng] 01:16:59,574 |-INFO in ch.qos.logback.core.sift.SiftProcessor@fadbd85 - End of configuration. [testng] [2024-12-14 01:17:01,004] [pool-1-thread-10] Initializing /data/marc/V0606J.oib: [testng] 01:17:01,005 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:17:01,005 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:17:01,005 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-14_01-17-01.log] [testng] 01:17:01,006 |-INFO in ch.qos.logback.core.sift.SiftProcessor@472f60e2 - End of configuration. [testng] [2024-12-14 01:17:04,210] [pool-1-thread-9] Initializing /data/johannes/step4.bmp: [testng] 01:17:04,210 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:17:04,210 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:17:04,211 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-14_01-17-04.log] [testng] 01:17:04,211 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4255dea5 - End of configuration. [testng] [2024-12-14 01:17:04,446] [pool-1-thread-8] Initializing /data/karl/Image0009.oib: [testng] 01:17:04,446 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:17:04,446 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:17:04,447 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-14_01-17-04.log] [testng] 01:17:04,447 |-INFO in ch.qos.logback.core.sift.SiftProcessor@67c1b5f7 - End of configuration. [testng] [2024-12-14 01:17:05,661] [pool-1-thread-7] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] 01:17:05,661 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:17:05,661 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:17:05,661 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-14_01-17-05.log] [testng] 01:17:05,662 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c0fda1c - End of configuration. [testng] [2024-12-14 01:17:07,237] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] 01:17:07,237 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:17:07,237 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:17:07,237 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-14_01-17-07.log] [testng] 01:17:07,238 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e3d9e29 - End of configuration. [testng] [2024-12-14 01:17:09,577] [pool-1-thread-5] Initializing /data/molly/11OCT2.OIF: [testng] 01:17:09,577 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:17:09,577 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:17:09,578 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-14_01-17-09.log] [testng] 01:17:09,578 |-INFO in ch.qos.logback.core.sift.SiftProcessor@10bb9ea8 - End of configuration. [testng] [2024-12-14 01:18:05,633] [pool-1-thread-4] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] 01:18:05,633 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:18:05,634 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:18:05,634 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-14_01-18-05.log] [testng] 01:18:05,635 |-INFO in ch.qos.logback.core.sift.SiftProcessor@50b4d28f - End of configuration. [testng] [2024-12-14 01:18:07,480] [pool-1-thread-3] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] 01:18:07,480 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:18:07,480 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:18:07,480 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-14_01-18-07.log] [testng] 01:18:07,481 |-INFO in ch.qos.logback.core.sift.SiftProcessor@83c57e1 - End of configuration. [testng] [2024-12-14 01:18:09,247] [pool-1-thread-2] Initializing /data/brian/Lambda10nm.oib: [testng] 01:18:09,247 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:18:09,247 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:18:09,248 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-14_01-18-09.log] [testng] 01:18:09,249 |-INFO in ch.qos.logback.core.sift.SiftProcessor@676f265c - End of configuration. [testng] [2024-12-14 01:18:17,092] [pool-1-thread-9] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] [2024-12-14 01:18:23,120] [pool-1-thread-2] Initializing /data/glen/simulstack.oif: [testng] [2024-12-14 01:18:29,712] [pool-1-thread-8] Initializing /data/molly/11OCT4.OIF: [testng] [2024-12-14 01:18:59,220] [pool-1-thread-12] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2024-12-14 01:19:00,397] [pool-1-thread-1] Initializing /data/glen/notsaturated.oib: [testng] [2024-12-14 01:19:01,628] [pool-1-thread-3] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-12-14 01:19:03,020] [pool-1-thread-11] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2024-12-14 01:19:04,539] [pool-1-thread-6] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-12-14 01:19:06,066] [pool-1-thread-7] Initializing /data/glen/simulstack.oib: [testng] [2024-12-14 01:19:13,028] [pool-1-thread-9] Initializing /data/david/Image0016.oif: [testng] [2024-12-14 01:19:21,445] [pool-1-thread-10] Initializing /data/stefan/cytosol_08b.oif: [testng] [2024-12-14 01:19:38,437] [pool-1-thread-12] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2024-12-14 01:19:41,412] [pool-1-thread-11] Initializing /data/qa-17748/Image0098.oib: [testng] [2024-12-14 01:19:43,815] [pool-1-thread-3] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2024-12-14 01:19:45,352] [pool-1-thread-7] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] [2024-12-14 01:19:48,046] [pool-1-thread-6] Initializing /data/simon/used_to_work.oib: [testng] [2024-12-14 01:19:51,743] [pool-1-thread-1] Initializing /data/chris/missegragation-15.oib: [testng] [2024-12-14 01:20:05,144] [pool-1-thread-1] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-12-14 01:20:06,887] [pool-1-thread-11] Initializing /data/johannes/step5b.bmp: [testng] [2024-12-14 01:20:07,300] [pool-1-thread-3] Initializing /data/molly/11OCT10.OIF: [testng] [2024-12-14 01:20:51,800] [pool-1-thread-4] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2024-12-14 01:20:55,177] [pool-1-thread-6] Initializing /data/molly/11OCT9.OIF: [testng] [2024-12-14 01:21:57,909] [pool-1-thread-7] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-12-14 01:22:01,891] [pool-1-thread-12] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2024-12-14 01:22:06,256] [pool-1-thread-11] Initializing /data/stefan/yc2_live-03.oib: [testng] [2024-12-14 01:22:13,738] [pool-1-thread-1] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2024-12-14 01:22:19,836] [pool-1-thread-12] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] [2024-12-14 01:22:25,674] [pool-1-thread-11] Initializing /data/molly/11OCT3.OIF: [testng] [2024-12-14 01:24:58,264] [pool-1-thread-12] Initializing /data/molly/11OCT7.OIF: [testng] [2024-12-14 01:25:33,933] [pool-1-thread-9] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2024-12-14 01:28:51,396] [pool-1-thread-7] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-12-14 01:28:57,725] [pool-1-thread-4] Initializing /data/allan/62909#1.oib: [testng] [2024-12-14 01:29:01,977] [pool-1-thread-1] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-12-14 01:29:18,975] [pool-1-thread-4] Initializing /data/molly/11OCT5.OIF: [testng] [2024-12-14 01:29:45,649] [pool-1-thread-7] Initializing /data/qa-17748/Image0079.oib: [testng] [2024-12-14 01:29:54,684] [pool-1-thread-7] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2024-12-14 01:34:00,455] [pool-1-thread-9] Initializing /data/tom/RGB-1.avi: [testng] [2024-12-14 01:34:07,610] [pool-1-thread-9] Initializing /data/glen/singleseqframe.oif: [testng] [2024-12-14 01:35:41,469] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-12-14 01:35:52,219] [pool-1-thread-9] Initializing /data/jae/Image0001.oib: [testng] [2024-12-14 01:36:03,719] [pool-1-thread-9] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-12-14 01:37:10,139] [pool-1-thread-9] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2024-12-14 01:37:23,206] [pool-1-thread-9] Initializing /data/glen/singlesimul.oif: [testng] [2024-12-14 01:39:12,104] [pool-1-thread-9] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2024-12-14 01:39:24,825] [pool-1-thread-9] Initializing /data/michael/CELL3.oib: [testng] [2024-12-14 01:39:35,231] [pool-1-thread-9] Initializing /data/simon/never_worked.oib: [testng] [2024-12-14 01:39:44,954] [pool-1-thread-9] Initializing /data/aryeh/control_test.oib: [testng] [2024-12-14 01:40:20,972] [pool-1-thread-9] Initializing /data/brian/lambda02nm.oib: [testng] [2024-12-14 01:40:30,436] [pool-1-thread-9] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-12-14 01:40:40,682] [pool-1-thread-9] Initializing /data/johannes/step1.bmp: [testng] [2024-12-14 01:40:46,487] [pool-1-thread-9] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-12-14 01:41:01,289] [pool-1-thread-9] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-12-14 01:41:12,978] [pool-1-thread-9] Initializing /data/yoshihito/XY.oif: [testng] [2024-12-14 01:42:02,624] [pool-1-thread-9] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-12-14 01:42:13,059] [pool-1-thread-9] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] [2024-12-14 01:48:46,014] [pool-1-thread-2] Initializing /data/glen/111407.oif: [testng] [2024-12-14 01:58:55,309] [pool-1-thread-8] Initializing /data/brian/FLIP.oib: [testng] [2024-12-14 01:59:10,310] [pool-1-thread-8] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2024-12-14 01:59:20,241] [pool-1-thread-1] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2024-12-14 01:59:27,606] [pool-1-thread-8] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-12-14 01:59:34,258] [pool-1-thread-1] Initializing /data/glen/Null file/test change.oif: [testng] [2024-12-14 01:59:41,327] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-12-14 01:59:58,544] [pool-1-thread-8] Initializing /data/molly/11OCT8.OIF: [testng] [2024-12-14 02:01:51,527] [pool-1-thread-1] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2024-12-14 02:02:04,104] [pool-1-thread-1] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-12-14 02:02:17,226] [pool-1-thread-1] Initializing /data/molly/11OCT6.OIF: [testng] [2024-12-14 02:04:41,879] [pool-1-thread-9] Initializing /data/glen/singlesimul.oib: [testng] [2024-12-14 02:04:53,267] [pool-1-thread-9] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2024-12-14 02:05:38,793] [pool-1-thread-9] Initializing /data/christian/20min.oif: [testng] [2024-12-14 02:05:50,690] [pool-1-thread-12] Initializing /data/marc/V0606L.oib: [testng] [2024-12-14 02:06:16,785] [pool-1-thread-12] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2024-12-14 02:06:31,723] [pool-1-thread-9] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] [2024-12-14 02:07:56,018] [pool-1-thread-9] Initializing /data/johannes/step4b.bmp: [testng] [2024-12-14 02:08:01,119] [pool-1-thread-9] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-12-14 02:08:11,147] [pool-1-thread-9] Initializing /data/aryeh/1h.oib: [testng] [2024-12-14 02:08:27,795] [pool-1-thread-9] Initializing /data/brian/PA-GFP-3.oib: [testng] [2024-12-14 02:08:40,814] [pool-1-thread-9] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-12-14 02:12:03,747] [pool-1-thread-4] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2024-12-14 02:12:07,231] [pool-1-thread-4] Initializing /data/david/Image0016.oib: [testng] [2024-12-14 02:12:17,118] [pool-1-thread-4] Initializing /data/monica/Image0056.oif: [testng] [2024-12-14 02:12:29,105] [pool-1-thread-10] Initializing /data/glen/Image0002.oif: [testng] [2024-12-14 02:13:50,053] [pool-1-thread-4] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-12-14 02:13:58,699] [pool-1-thread-4] Initializing /data/yasunori/series_1.oib: [testng] [2024-12-14 02:14:09,453] [pool-1-thread-4] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2024-12-14 02:14:44,775] [pool-1-thread-4] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] [2024-12-14 02:14:56,683] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-12-14 02:15:09,998] [pool-1-thread-4] Initializing /data/johannes/step3.bmp: [testng] [2024-12-14 02:15:13,890] [pool-1-thread-4] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2024-12-14 02:22:37,202] [pool-1-thread-3] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-12-14 02:22:43,406] [pool-1-thread-2] Initializing /data/kay/IM2pg.oib: [testng] [2024-12-14 02:22:48,612] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2024-12-14 02:22:56,938] [pool-1-thread-2] Initializing /data/francesco/fGfp.c15.oib: [testng] [2024-12-14 02:23:02,342] [pool-1-thread-3] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2024-12-14 02:23:08,078] [pool-1-thread-2] Initializing /data/glen/4205basal106072.oif: [testng] [2024-12-14 02:23:30,381] [pool-1-thread-3] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] [2024-12-14 02:24:14,274] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-12-14 02:24:30,954] [pool-1-thread-4] Initializing /data/glen/seqlinestack.oif: [testng] [2024-12-14 02:25:54,461] [pool-1-thread-12] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-12-14 02:26:09,071] [pool-1-thread-12] Initializing /data/glen/singleseqframe.oib: [testng] [2024-12-14 02:26:20,663] [pool-1-thread-12] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2024-12-14 02:26:33,388] [pool-1-thread-12] Initializing /data/pedro/plv-test.oib: [testng] [2024-12-14 02:26:45,055] [pool-1-thread-12] Initializing /data/glen/LUT issue/60x11.oif: [testng] 02:30:19,819 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:30:19,819 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:30:19,820 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-14_02-30-19.log] [testng] 02:30:19,821 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f075637 - End of configuration. [testng] [2024-12-14 02:32:55,342] [pool-1-thread-9] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] 02:33:54,472 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:33:54,472 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:33:54,474 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-14_02-33-54.log] [testng] 02:33:54,475 |-INFO in ch.qos.logback.core.sift.SiftProcessor@67beb62e - End of configuration. [testng] [2024-12-14 02:39:58,956] [pool-1-thread-5] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2024-12-14 02:40:12,181] [pool-1-thread-5] Initializing /data/yoshihito/XY.oib: [testng] [2024-12-14 02:40:24,030] [pool-1-thread-5] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2024-12-14 02:40:35,046] [pool-1-thread-5] Initializing /data/stefan/cytosol_03e.oib: [testng] [2024-12-14 02:40:52,698] [pool-1-thread-5] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-12-14 02:41:04,493] [pool-1-thread-5] Initializing /data/glen/seqlinestack.oib: [testng] [2024-12-14 02:41:17,318] [pool-1-thread-5] Initializing /data/sten/01.oib: [testng] [2024-12-14 02:41:29,097] [pool-1-thread-5] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-12-14 02:41:42,510] [pool-1-thread-5] Initializing /data/johannes/step2.bmp: [testng] [2024-12-14 02:41:52,420] [pool-1-thread-5] Initializing /data/stefan/cytosol_01a.oif: [testng] [2024-12-14 02:45:56,674] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2024-12-14 02:46:07,404] [pool-1-thread-6] Initializing /data/brian/CFP-GFP2.oib: [testng] [2024-12-14 02:46:17,035] [pool-1-thread-6] Initializing /data/glen/Null file/test no change.oif: [testng] [2024-12-14 02:47:19,848] [pool-1-thread-6] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2024-12-14 02:47:28,334] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] [2024-12-14 02:47:38,352] [pool-1-thread-6] Initializing /data/glen/singleseqline.oib: [testng] [2024-12-14 02:47:45,974] [pool-1-thread-6] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2024-12-14 02:47:53,654] [pool-1-thread-6] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2024-12-14 02:48:01,756] [pool-1-thread-6] Initializing /data/glen/singleseqline.oif: [testng] [2024-12-14 02:48:13,994] [pool-1-thread-8] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-12-14 02:49:18,583] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-12-14 02:49:28,770] [pool-1-thread-10] Initializing /data/molly/11OCT11.OIF: [testng] [2024-12-14 02:50:09,799] [pool-1-thread-6] Initializing /data/brian/Kaede15.oib: [testng] [2024-12-14 02:50:22,451] [pool-1-thread-6] Initializing /data/tom/zseries-test.oib: [testng] [2024-12-14 02:50:25,140] [pool-1-thread-8] Initializing /data/glen/notsaturated.oif: [testng] [2024-12-14 02:50:43,841] [pool-1-thread-6] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2024-12-14 02:50:55,667] [pool-1-thread-6] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2024-12-14 02:50:59,835] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2024-12-14 02:51:12,473] [pool-1-thread-6] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] 03:39:46,176 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 03:39:46,176 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:39:46,178 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-14_03-39-46.log] [testng] 03:39:46,178 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7862149b - End of configuration. [testng] 04:00:02,130 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 04:00:02,130 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:00:02,131 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-14_04-00-02.log] [testng] 04:00:02,131 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f1b3787 - End of configuration. [testng] 05:41:52,572 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 05:41:52,572 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:41:52,573 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-14_05-41-52.log] [testng] 05:41:52,573 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f370211 - End of configuration. [testng] 05:56:04,047 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 05:56:04,048 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:56:04,049 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-14_05-56-04.log] [testng] 05:56:04,049 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1dea0730 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 297 minutes 11 seconds Finished: SUCCESS