![[Jenkins]](/jenkins/static/d8ca237c/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 290 originally caused by: Started by upstream project "Trigger" build number 309 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4 [BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins5042067015068489913.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_45878_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 06:13:21,077 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 06:13:21,078 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service. [testng] 06:13:21,078 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 06:13:21,079 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 06:13:21,080 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 06:13:21,080 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 06:13:21,080 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 06:13:21,080 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 06:13:21,081 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 06:13:21,082 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 06:13:21,082 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 06:13:21,082 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 06:13:21,269 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 06:13:21,269 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 06:13:21,291 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 06:13:21,291 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 06:13:21,297 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 06:13:21,297 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 06:13:21,297 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 06:13:21,298 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 06:13:21,298 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration. [testng] 06:13:21,299 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point [testng] 06:13:21,299 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 218 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-14 06:13:21,307] [main] java.version = 11.0.16 [testng] 06:13:21,310 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 06:13:21,310 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:13:21,352 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-14_06-13-21.log] [testng] 06:13:21,354 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2024-12-14 06:13:21,356] [main] testng.directory = /data [testng] [2024-12-14 06:13:21,356] [main] testng.configDirectory = /config [testng] [2024-12-14 06:13:21,368] [main] testng.multiplier = 1.0 [testng] [2024-12-14 06:13:21,370] [main] testng.in-memory = false [testng] [2024-12-14 06:13:21,370] [main] testng.allow-missing = false [testng] [2024-12-14 06:13:21,370] [main] user.language = en [testng] [2024-12-14 06:13:21,370] [main] user.country = ${user.country} [testng] [2024-12-14 06:13:21,371] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-12-14 06:15:27,068] [main] ---------------------------------------- [testng] [2024-12-14 06:15:27,068] [main] Total files: 15735 [testng] [2024-12-14 06:15:27,068] [main] Scan time: 125.697 s (7 ms/file) [testng] [2024-12-14 06:15:27,069] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-14 06:22:42,647] [pool-1-thread-1] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] 06:22:42,647 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 06:22:42,648 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:22:42,649 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-14_06-22-42.log] [testng] 06:22:42,650 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49aa7bd0 - End of configuration. [testng] [2024-12-14 06:22:47,783] [pool-1-thread-12] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] 06:22:47,783 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 06:22:47,783 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:22:47,784 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-14_06-22-47.log] [testng] 06:22:47,784 |-INFO in ch.qos.logback.core.sift.SiftProcessor@102a5f5e - End of configuration. [testng] [2024-12-14 06:22:52,265] [pool-1-thread-11] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] 06:22:52,265 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 06:22:52,265 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:22:52,266 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-14_06-22-52.log] [testng] 06:22:52,266 |-INFO in ch.qos.logback.core.sift.SiftProcessor@60ea0b18 - End of configuration. [testng] [2024-12-14 06:22:55,995] [pool-1-thread-10] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] 06:22:55,995 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 06:22:55,995 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:22:55,995 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-14_06-22-55.log] [testng] 06:22:55,996 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3f7adbc4 - End of configuration. [testng] [2024-12-14 06:23:00,258] [pool-1-thread-9] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] 06:23:00,258 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 06:23:00,258 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:23:00,258 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-14_06-23-00.log] [testng] 06:23:00,259 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e80d0fa - End of configuration. [testng] [2024-12-14 06:23:04,739] [pool-1-thread-8] Initializing /data/converted/dietmar/137.tif: [testng] 06:23:04,739 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 06:23:04,739 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:23:04,740 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-14_06-23-04.log] [testng] 06:23:04,740 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79229015 - End of configuration. [testng] [2024-12-14 06:23:08,643] [pool-1-thread-7] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] 06:23:08,644 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 06:23:08,644 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:23:08,645 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-14_06-23-08.log] [testng] 06:23:08,646 |-INFO in ch.qos.logback.core.sift.SiftProcessor@308eea37 - End of configuration. [testng] [2024-12-14 06:23:12,108] [pool-1-thread-6] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] 06:23:12,108 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 06:23:12,109 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:23:12,109 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-14_06-23-12.log] [testng] 06:23:12,109 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5334ebbf - End of configuration. [testng] [2024-12-14 06:23:15,112] [pool-1-thread-5] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] 06:23:15,112 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 06:23:15,113 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:23:15,113 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-14_06-23-15.log] [testng] 06:23:15,113 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36f7d8e7 - End of configuration. [testng] [2024-12-14 06:23:21,298] [pool-1-thread-4] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] 06:23:21,298 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 06:23:21,298 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:23:21,299 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-14_06-23-21.log] [testng] 06:23:21,300 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6dabc21c - End of configuration. [testng] [2024-12-14 06:23:26,307] [pool-1-thread-3] Initializing /data/converted/darren/section0002_w1.tif: [testng] 06:23:26,307 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 06:23:26,307 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:23:26,308 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-14_06-23-26.log] [testng] 06:23:26,308 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2e9d3488 - End of configuration. [testng] [2024-12-14 06:23:31,149] [pool-1-thread-2] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] 06:23:31,149 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 06:23:31,149 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:23:31,149 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-14_06-23-31.log] [testng] 06:23:31,150 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f8319de - End of configuration. [testng] [2024-12-14 06:24:45,271] [pool-1-thread-1] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] [2024-12-14 06:24:51,047] [pool-1-thread-3] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2024-12-14 06:25:00,882] [pool-1-thread-9] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2024-12-14 06:25:05,168] [pool-1-thread-10] Initializing /data/converted/michel/d.tif: [testng] [2024-12-14 06:25:19,223] [pool-1-thread-6] Initializing /data/scott/Slide133-08.tif: [testng] [2024-12-14 06:25:23,632] [pool-1-thread-12] Initializing /data/converted/nicolas/image.tif: [testng] [2024-12-14 06:26:35,186] [pool-1-thread-12] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2024-12-14 06:26:42,239] [pool-1-thread-10] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2024-12-14 06:26:47,672] [pool-1-thread-6] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2024-12-14 06:27:42,494] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2024-12-14 06:28:05,685] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] [2024-12-14 06:28:11,846] [pool-1-thread-10] Initializing /data/converted/sebastien/test.tif: [testng] [2024-12-14 06:32:21,456] [pool-1-thread-3] Initializing /data/scott/Slide133-04.tif: [testng] [2024-12-14 06:32:58,755] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2024-12-14 06:33:21,868] [pool-1-thread-3] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2024-12-14 06:33:45,839] [pool-1-thread-3] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2024-12-14 06:38:29,330] [pool-1-thread-3] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2024-12-14 06:38:33,244] [pool-1-thread-7] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2024-12-14 06:39:58,182] [pool-1-thread-7] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2024-12-14 06:40:11,894] [pool-1-thread-1] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2024-12-14 06:41:01,777] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2024-12-14 06:41:24,573] [pool-1-thread-1] Initializing /data/converted/lior/live+cf5b.tif: [testng] [2024-12-14 06:41:36,843] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2024-12-14 06:41:55,155] [pool-1-thread-3] Initializing /data/converted/othmar/mozaic.tif: [testng] [2024-12-14 06:43:25,385] [pool-1-thread-1] Initializing /data/converted/kelsey/432x342BW.tif: [testng] [2024-12-14 06:44:10,034] [pool-1-thread-6] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2024-12-14 06:44:26,988] [pool-1-thread-1] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2024-12-14 06:45:15,093] [pool-1-thread-9] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2024-12-14 06:46:18,142] [pool-1-thread-6] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2024-12-14 06:46:22,066] [pool-1-thread-9] Initializing /data/othmar/mozaic.tif: [testng] [2024-12-14 06:46:36,638] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2024-12-14 06:46:50,850] [pool-1-thread-4] Initializing /data/converted/kelsey/650x514BW.tif: [testng] [2024-12-14 06:47:45,571] [pool-1-thread-6] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2024-12-14 06:47:55,311] [pool-1-thread-10] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2024-12-14 06:48:00,187] [pool-1-thread-4] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2024-12-14 06:49:34,533] [pool-1-thread-4] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2024-12-14 06:49:43,295] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2024-12-14 06:51:06,251] [pool-1-thread-11] Initializing /data/converted/stephan/notok1.tif: [testng] [2024-12-14 06:51:25,269] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2024-12-14 06:51:37,494] [pool-1-thread-3] Initializing /data/converted/converted/mri-stack.tif: [testng] [2024-12-14 06:52:36,255] [pool-1-thread-3] Initializing /data/converted/sebastien/F1.tif: [testng] [2024-12-14 06:55:52,761] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2024-12-14 06:55:57,544] [pool-1-thread-11] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2024-12-14 06:59:37,989] [pool-1-thread-7] Initializing /data/converted/michel/e.tif: [testng] [2024-12-14 07:01:13,858] [pool-1-thread-8] Initializing /data/converted/vladan/vladan.tif: [testng] [2024-12-14 07:01:19,270] [pool-1-thread-3] Initializing /data/converted/michel/b.tif: [testng] [2024-12-14 07:01:56,467] [pool-1-thread-7] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2024-12-14 07:02:54,576] [pool-1-thread-3] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2024-12-14 07:04:45,293] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2024-12-14 07:06:53,262] [pool-1-thread-2] Initializing /data/converted/karsten/Bild1.tif: [testng] [2024-12-14 07:08:36,105] [pool-1-thread-2] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2024-12-14 07:09:22,464] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2024-12-14 07:09:40,769] [pool-1-thread-2] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] [2024-12-14 07:10:58,676] [pool-1-thread-4] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2024-12-14 07:13:16,483] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2024-12-14 07:14:31,094] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2024-12-14 07:14:55,344] [pool-1-thread-9] Initializing /data/converted/dietmar/138.tif: [testng] [2024-12-14 07:16:47,038] [pool-1-thread-8] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2024-12-14 07:18:12,641] [pool-1-thread-8] Initializing /data/scott/Slide133-11.tif: [testng] [2024-12-14 07:19:13,192] [pool-1-thread-8] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2024-12-14 07:20:16,170] [pool-1-thread-8] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] [2024-12-14 07:20:38,962] [pool-1-thread-4] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2024-12-14 07:24:10,803] [pool-1-thread-3] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] [2024-12-14 07:30:17,160] [pool-1-thread-10] Initializing /data/converted/michel/a.tif: [testng] [2024-12-14 07:31:22,421] [pool-1-thread-10] Initializing /data/converted/othmar/z-stack.tif: [testng] [2024-12-14 07:34:13,572] [pool-1-thread-3] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2024-12-14 07:34:45,111] [pool-1-thread-9] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2024-12-14 07:34:50,102] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2024-12-14 07:35:57,774] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2024-12-14 07:36:22,421] [pool-1-thread-12] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] 07:42:27,200 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 07:42:27,200 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:42:27,201 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-14_07-42-27.log] [testng] 07:42:27,201 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71d3a86d - End of configuration. [testng] [2024-12-14 07:45:59,283] [pool-1-thread-12] Initializing /data/converted/converted/damian.tif: [testng] [2024-12-14 07:46:55,990] [pool-1-thread-12] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2024-12-14 07:48:29,321] [pool-1-thread-4] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2024-12-14 07:48:33,012] [pool-1-thread-3] Initializing /data/converted/converted/2chz.tif: [testng] [2024-12-14 07:49:59,807] [pool-1-thread-1] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2024-12-14 07:50:09,196] [pool-1-thread-5] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2024-12-14 07:50:58,511] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2024-12-14 07:52:47,910] [pool-1-thread-7] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2024-12-14 07:53:10,477] [pool-1-thread-9] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2024-12-14 07:53:51,026] [pool-1-thread-7] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2024-12-14 07:54:20,750] [pool-1-thread-9] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2024-12-14 07:54:35,247] [pool-1-thread-4] Initializing /data/converted/dan/adultnr1.tif: [testng] [2024-12-14 07:55:26,872] [pool-1-thread-7] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2024-12-14 07:56:04,695] [pool-1-thread-3] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2024-12-14 07:56:23,888] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2024-12-14 07:57:13,841] [pool-1-thread-4] Initializing /data/converted/converted/2chzt.tif: [testng] [2024-12-14 08:00:18,404] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2024-12-14 08:01:43,949] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2024-12-14 08:04:26,783] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2024-12-14 08:08:10,287] [pool-1-thread-10] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2024-12-14 08:09:13,535] [pool-1-thread-1] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2024-12-14 08:09:40,039] [pool-1-thread-12] Initializing /data/converted/michel/c.tif: [testng] [2024-12-14 08:10:02,327] [pool-1-thread-2] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2024-12-14 08:11:14,504] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2024-12-14 08:11:33,325] [pool-1-thread-2] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2024-12-14 08:14:55,950] [pool-1-thread-3] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2024-12-14 08:15:22,951] [pool-1-thread-9] Initializing /data/converted/karsten/Bild2.tif: [testng] [2024-12-14 08:16:04,358] [pool-1-thread-2] Initializing /data/scott/Slide133-01.tif: [testng] [2024-12-14 08:16:55,727] [pool-1-thread-9] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2024-12-14 08:17:08,169] [pool-1-thread-2] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2024-12-14 08:17:59,340] [pool-1-thread-7] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2024-12-14 08:18:20,236] [pool-1-thread-2] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2024-12-14 08:19:17,162] [pool-1-thread-1] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2024-12-14 08:20:45,343] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2024-12-14 08:23:18,046] [pool-1-thread-7] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2024-12-14 08:24:17,046] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2024-12-14 08:24:57,319] [pool-1-thread-7] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2024-12-14 08:27:59,374] [pool-1-thread-12] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2024-12-14 08:37:30,758] [pool-1-thread-8] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2024-12-14 08:38:20,817] [pool-1-thread-8] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2024-12-14 08:38:28,153] [pool-1-thread-9] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2024-12-14 08:39:06,782] [pool-1-thread-8] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2024-12-14 08:40:18,842] [pool-1-thread-5] Initializing /data/converted/stephan/notok2.tif: [testng] 08:52:42,274 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 08:52:42,274 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:52:42,276 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-14_08-52-42.log] [testng] 08:52:42,276 |-INFO in ch.qos.logback.core.sift.SiftProcessor@eb48600 - End of configuration. [testng] 09:50:00,271 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 09:50:00,271 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:50:00,272 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-14_09-50-00.log] [testng] 09:50:00,272 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1c7729bc - End of configuration. [testng] 09:54:57,102 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 09:54:57,102 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:54:57,103 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-14_09-54-57.log] [testng] 09:54:57,103 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d0ea3a9 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 221 minutes 40 seconds Finished: SUCCESS