Skip to content

Console Output

Started by upstream project "BIOFORMATS-test-repo" build number 291
originally caused by:
 Started by upstream project "Trigger" build number 310
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8
[BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins13732699407398450538.sh
+ '[' ome-xml = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_46049_merge_ci -v /uod/idr/repos/curated/ome-xml:/data -v /uod/idr-scratch/merge-ci/curated/ome-xml:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 08:33:33,997 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 08:33:34,079 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 08:33:34,125 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 08:33:34,125 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 08:33:34,131 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 08:33:34,131 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 08:33:34,131 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 08:33:34,132 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 08:33:34,132 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5d534f5d - End of configuration.
   [testng] 08:33:34,132 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@51c668e3 - Registering current configuration as safe fallback point
   [testng] 08:33:34,132 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2e6a8155 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 510 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-12-15 08:33:34,141] [main] java.version = 17.0.2
   [testng] 08:33:34,144 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 08:33:34,144 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 08:33:34,184 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-15_08-33-34.log]
   [testng] 08:33:34,185 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration.
   [testng] [2024-12-15 08:33:34,187] [main] testng.directory = /data
   [testng] [2024-12-15 08:33:34,187] [main] testng.configDirectory = /config
   [testng] [2024-12-15 08:33:34,196] [main] testng.multiplier = 1.0
   [testng] [2024-12-15 08:33:34,197] [main] testng.in-memory = false
   [testng] [2024-12-15 08:33:34,197] [main] testng.allow-missing = false
   [testng] [2024-12-15 08:33:34,197] [main] user.language = en
   [testng] [2024-12-15 08:33:34,197] [main] user.country = ${user.country}
   [testng] [2024-12-15 08:33:34,197] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-12-15 08:33:42,873] [main] ----------------------------------------
   [testng] [2024-12-15 08:33:42,873] [main] Total files: 203
   [testng] [2024-12-15 08:33:42,874] [main] Scan time: 8.676 s (42 ms/file)
   [testng] [2024-12-15 08:33:42,874] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 202 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-12-15 08:39:12,346] [pool-1-thread-1] Initializing /data/public/2011-06/z-series-time-series.ome.xml: 
   [testng] 08:39:12,347 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 08:39:12,347 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 08:39:12,348 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-15_08-39-12.log]
   [testng] 08:39:12,348 |-INFO in ch.qos.logback.core.sift.SiftProcessor@60042e6b - End of configuration.
   [testng] [2024-12-15 08:39:13,429] [pool-1-thread-12] Initializing /data/public/2011-06/time-series.ome.xml: 
   [testng] 08:39:13,430 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 08:39:13,430 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 08:39:13,430 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-15_08-39-13.log]
   [testng] 08:39:13,431 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18f35c17 - End of configuration.
   [testng] [2024-12-15 08:39:14,584] [pool-1-thread-11] Initializing /data/public/2008-09/instrument.ome.xml: 
   [testng] 08:39:14,584 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 08:39:14,584 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 08:39:14,585 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-15_08-39-14.log]
   [testng] 08:39:14,585 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c2005ba - End of configuration.
   [testng] [2024-12-15 08:39:15,775] [pool-1-thread-10] Initializing /data/public/2016-06/timestampannotation.ome.xml: 
   [testng] 08:39:15,775 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 08:39:15,775 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 08:39:15,775 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-15_08-39-15.log]
   [testng] 08:39:15,776 |-INFO in ch.qos.logback.core.sift.SiftProcessor@b44a992 - End of configuration.
   [testng] [2024-12-15 08:39:16,863] [pool-1-thread-9] Initializing /data/samples/sdub.ome: 
   [testng] 08:39:16,863 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 08:39:16,863 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 08:39:16,864 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-15_08-39-16.log]
   [testng] 08:39:16,864 |-INFO in ch.qos.logback.core.sift.SiftProcessor@24fecc0d - End of configuration.
   [testng] [2024-12-15 08:39:18,112] [pool-1-thread-8] Initializing /data/public/2010-04/multi-channel.ome.xml: 
   [testng] 08:39:18,112 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 08:39:18,112 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 08:39:18,112 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-15_08-39-18.log]
   [testng] 08:39:18,113 |-INFO in ch.qos.logback.core.sift.SiftProcessor@59d5bc5f - End of configuration.
   [testng] [2024-12-15 08:39:19,318] [pool-1-thread-7] Initializing /data/public/2015-01/spim.ome.xml: 
   [testng] 08:39:19,318 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 08:39:19,318 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 08:39:19,319 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-15_08-39-19.log]
   [testng] 08:39:19,319 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7511c969 - End of configuration.
   [testng] [2024-12-15 08:39:20,504] [pool-1-thread-6] Initializing /data/public/2012-06/time-series.ome.xml: 
   [testng] 08:39:20,504 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 08:39:20,504 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 08:39:20,505 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-15_08-39-20.log]
   [testng] 08:39:20,505 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6077de79 - End of configuration.
   [testng] [2024-12-15 08:39:21,903] [pool-1-thread-5] Initializing /data/public/2008-09/multi-pixel-aquired.ome.xml: 
   [testng] 08:39:21,904 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 08:39:21,904 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 08:39:21,904 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-15_08-39-21.log]
   [testng] 08:39:21,905 |-INFO in ch.qos.logback.core.sift.SiftProcessor@76d0a974 - End of configuration.
   [testng] [2024-12-15 08:39:23,009] [pool-1-thread-4] Initializing /data/public/2016-06/minimum-specification.ome.xml: 
   [testng] 08:39:23,009 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 08:39:23,010 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 08:39:23,010 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-15_08-39-23.log]
   [testng] 08:39:23,010 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f13f9b7 - End of configuration.
   [testng] [2024-12-15 08:39:24,221] [pool-1-thread-3] Initializing /data/public/2012-06/z-series.ome.xml: 
   [testng] 08:39:24,221 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 08:39:24,221 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 08:39:24,222 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-15_08-39-24.log]
   [testng] 08:39:24,222 |-INFO in ch.qos.logback.core.sift.SiftProcessor@674b5f8a - End of configuration.
   [testng] [2024-12-15 08:39:25,202] [pool-1-thread-2] Initializing /data/public/2015-01/multi-channel-time-series.ome.xml: 
   [testng] 08:39:25,202 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 08:39:25,202 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 08:39:25,203 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-15_08-39-25.log]
   [testng] 08:39:25,203 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14b57908 - End of configuration.
   [testng] [2024-12-15 08:39:36,630] [pool-1-thread-4] Initializing /data/public/2015-01/single-image.ome.xml: 
   [testng] [2024-12-15 08:39:37,544] [pool-1-thread-7] Initializing /data/public/2016-06/instrument.ome.xml: 
   [testng] [2024-12-15 08:39:38,466] [pool-1-thread-3] Initializing /data/public/2016-06/z-series-time-series.ome.xml: 
   [testng] [2024-12-15 08:39:39,502] [pool-1-thread-12] Initializing /data/public/2015-01/ROI.ome.xml: 
   [testng] [2024-12-15 08:39:40,501] [pool-1-thread-6] Initializing /data/public/2011-06/multi-channel-z-series.ome.xml: 
   [testng] [2024-12-15 08:39:41,456] [pool-1-thread-2] Initializing /data/public/2016-06/commentannotation.ome.xml: 
   [testng] [2024-12-15 08:39:42,521] [pool-1-thread-8] Initializing /data/public/2013-06/metadata-only.ome.xml: 
   [testng] [2024-12-15 08:39:43,592] [pool-1-thread-5] Initializing /data/public/2010-06/one-screen-one-plate-four-wells.ome.xml: 
   [testng] [2024-12-15 08:39:44,632] [pool-1-thread-1] Initializing /data/samples/Sample-2003_FC.ome: 
   [testng] [2024-12-15 08:39:45,683] [pool-1-thread-11] Initializing /data/public/2015-01/minimum-specification.ome.xml: 
   [testng] [2024-12-15 08:39:46,582] [pool-1-thread-10] Initializing /data/public/2011-06/ROI.ome.xml: 
   [testng] [2024-12-15 08:39:47,477] [pool-1-thread-9] Initializing /data/public/2016-06/xmlannotation-multi-value.ome.xml: 
   [testng] [2024-12-15 08:40:01,311] [pool-1-thread-11] Initializing /data/public/2010-04/multi-channel-z-series.ome.xml: 
   [testng] [2024-12-15 08:40:02,442] [pool-1-thread-10] Initializing /data/public/2015-01/z-series.ome.xml: 
   [testng] [2024-12-15 08:40:03,648] [pool-1-thread-7] Initializing /data/public/2011-06/z-series.ome.xml: 
   [testng] [2024-12-15 08:40:04,917] [pool-1-thread-6] Initializing /data/public/2011-06/filter.ome.xml: 
   [testng] [2024-12-15 08:40:06,019] [pool-1-thread-3] Initializing /data/public/2009-09/multi-channel.ome.xml: 
   [testng] [2024-12-15 08:40:07,208] [pool-1-thread-12] Initializing /data/public/2010-04/ROI.ome.xml: 
   [testng] [2024-12-15 08:40:08,527] [pool-1-thread-1] Initializing /data/public/2009-09/instrument.ome.xml: 
   [testng] [2024-12-15 08:40:12,216] [pool-1-thread-4] Initializing /data/curtis/all-black.tif: 
   [testng] [2024-12-15 08:40:25,232] [pool-1-thread-8] Initializing /data/public/2011-06/single-image.ome.xml: 
   [testng] [2024-12-15 08:40:27,505] [pool-1-thread-2] Initializing /data/public/2012-06/filter.ome.xml: 
   [testng] [2024-12-15 08:40:29,139] [pool-1-thread-9] Initializing /data/public/2012-06/instrument.ome.xml: 
   [testng] [2024-12-15 08:40:30,820] [pool-1-thread-5] Initializing /data/public/2011-06/xmlannotation-svg.ome.xml: 
   [testng] [2024-12-15 08:40:43,991] [pool-1-thread-10] Initializing /data/public/2013-06/multi-channel-time-series.ome.xml: 
   [testng] [2024-12-15 08:40:45,033] [pool-1-thread-9] Initializing /data/public/2011-06/two-screens-two-plates-four-wells.ome.xml: 
   [testng] [2024-12-15 08:40:46,137] [pool-1-thread-12] Initializing /data/public/2011-06/spim.ome.xml: 
   [testng] [2024-12-15 08:40:47,295] [pool-1-thread-11] Initializing /data/public/2016-06/instrument-units-alternate.ome.xml: 
   [testng] [2024-12-15 08:40:48,344] [pool-1-thread-5] Initializing /data/public/2013-06/filter.ome.xml: 
   [testng] [2024-12-15 08:40:49,593] [pool-1-thread-6] Initializing /data/public/2012-06/z-series-time-series.ome.xml: 
   [testng] [2024-12-15 08:40:50,560] [pool-1-thread-2] Initializing /data/public/2009-09/z-series-time-series.ome.xml: 
   [testng] [2024-12-15 08:40:51,579] [pool-1-thread-3] Initializing /data/public/2008-09/multi-channel-z-series-time-series.ome.xml: 
   [testng] [2024-12-15 08:40:52,981] [pool-1-thread-8] Initializing /data/public/2015-01/instrument.ome.xml: 
   [testng] [2024-12-15 08:40:54,072] [pool-1-thread-7] Initializing /data/public/2012-06/transformations-downgrade.ome.xml: 
   [testng] [2024-12-15 08:40:55,171] [pool-1-thread-1] Initializing /data/public/2010-04/z-series.ome.xml: 
   [testng] [2024-12-15 08:41:07,004] [pool-1-thread-8] Initializing /data/samples/Sample-2007_06.ome: 
   [testng] [2024-12-15 08:41:08,063] [pool-1-thread-1] Initializing /data/public/2010-06/instrument.ome.xml: 
   [testng] [2024-12-15 08:41:09,152] [pool-1-thread-11] Initializing /data/public/2009-09/single-image.ome.xml: 
   [testng] [2024-12-15 08:41:10,122] [pool-1-thread-10] Initializing /data/public/2011-06/one-screen-one-plate-four-wells.ome.xml: 
   [testng] [2024-12-15 08:41:11,251] [pool-1-thread-5] Initializing /data/public/2010-06/spim.ome.xml: 
   [testng] [2024-12-15 08:41:12,223] [pool-1-thread-6] Initializing /data/public/2015-01/two-screens-two-plates-four-wells.ome.xml: 
   [testng] [2024-12-15 08:41:13,177] [pool-1-thread-7] Initializing /data/public/2013-06/timestampannotation-posix-only.ome.xml: 
   [testng] [2024-12-15 08:41:14,152] [pool-1-thread-12] Initializing /data/curtis/black6-7.ome: 
   [testng] [2024-12-15 08:41:15,269] [pool-1-thread-9] Initializing /data/public/2008-09/multi-channel-time-series.ome.xml: 
   [testng] [2024-12-15 08:41:16,226] [pool-1-thread-3] Initializing /data/public/2010-06/ROI.ome.xml: 
   [testng] [2024-12-15 08:41:17,139] [pool-1-thread-2] Initializing /data/public/2008-09/time-series.ome.xml: 
   [testng] [2024-12-15 08:41:20,440] [pool-1-thread-4] Initializing /data/public/2009-09/two-screens-two-plates-four-wells.ome.xml: 
   [testng] [2024-12-15 08:41:27,841] [pool-1-thread-11] Initializing /data/public/2011-06/transformations-upgrade.ome.xml: 
   [testng] [2024-12-15 08:41:28,864] [pool-1-thread-1] Initializing /data/public/2016-06/single-image.ome.xml: 
   [testng] [2024-12-15 08:41:29,914] [pool-1-thread-3] Initializing /data/public/2013-06/xmlannotation-svg.ome.xml: 
   [testng] [2024-12-15 08:41:30,868] [pool-1-thread-2] Initializing /data/public/2013-06/multi-channel.ome.xml: 
   [testng] [2024-12-15 08:41:31,827] [pool-1-thread-9] Initializing /data/public/2016-06/xmlannotation-svg.ome.xml: 
   [testng] [2024-12-15 08:41:32,779] [pool-1-thread-8] Initializing /data/public/2015-01/z-series-time-series.ome.xml: 
   [testng] [2024-12-15 08:41:33,817] [pool-1-thread-7] Initializing /data/johannes/20100625_W3_Ppac_8.ome: 
   [testng] [2024-12-15 08:41:35,143] [pool-1-thread-6] Initializing /data/public/2011-06/multi-channel-z-series-time-series.ome.xml: 
   [testng] [2024-12-15 08:41:36,318] [pool-1-thread-5] Initializing /data/public/2015-01/instrument-units-default.ome.xml: 
   [testng] [2024-12-15 08:41:37,468] [pool-1-thread-10] Initializing /data/public/2012-06/two-screens-two-plates-four-wells.ome.xml: 
   [testng] [2024-12-15 08:41:38,473] [pool-1-thread-12] Initializing /data/public/2010-06/filter.ome.xml: 
   [testng] [2024-12-15 08:41:42,772] [pool-1-thread-4] Initializing /data/public/2015-01/transformations-upgrade.ome.xml: 
   [testng] [2024-12-15 08:41:49,522] [pool-1-thread-1] Initializing /data/public/2012-06/no-date.ome.xml: 
   [testng] [2024-12-15 08:41:50,565] [pool-1-thread-12] Initializing /data/mario/Hoechst_ND - n000000.ome: 
   [testng] [2024-12-15 08:41:51,620] [pool-1-thread-8] Initializing /data/public/2010-06/z-series-time-series.ome.xml: 
   [testng] [2024-12-15 08:41:52,616] [pool-1-thread-3] Initializing /data/public/2009-09/ROI.ome.xml: 
   [testng] [2024-12-15 08:41:53,501] [pool-1-thread-9] Initializing /data/samples/Sample-2003-custom-ST.ome: 
   [testng] [2024-12-15 08:41:54,593] [pool-1-thread-2] Initializing /data/public/2016-06/transformations-upgrade.ome.xml: 
   [testng] [2024-12-15 08:41:55,640] [pool-1-thread-5] Initializing /data/public/2011-06/instrument.ome.xml: 
   [testng] [2024-12-15 08:41:56,659] [pool-1-thread-6] Initializing /data/sandeep/synth_rbc.ome: 
   [testng] [2024-12-15 08:41:57,847] [pool-1-thread-11] Initializing /data/public/2010-04/instrument.ome.xml: 
   [testng] [2024-12-15 08:41:58,840] [pool-1-thread-10] Initializing /data/public/2009-09/metadata-only.ome.xml: 
   [testng] [2024-12-15 08:42:00,321] [pool-1-thread-7] Initializing /data/mario/Hoechst_ND - n000000.tif: 
   [testng] [2024-12-15 08:42:09,478] [pool-1-thread-4] Initializing /data/public/2015-01/transformations-downgrade.ome.xml: 
   [testng] [2024-12-15 08:42:15,906] [pool-1-thread-9] Initializing /data/public/2012-06/multi-channel-z-series-time-series.ome.xml: 
   [testng] [2024-12-15 08:42:17,026] [pool-1-thread-10] Initializing /data/public/2016-06/mapannotation.ome.xml: 
   [testng] [2024-12-15 08:42:18,089] [pool-1-thread-1] Initializing /data/public/2015-01/commentannotation.ome.xml: 
   [testng] [2024-12-15 08:42:19,157] [pool-1-thread-3] Initializing /data/public/2016-06/folders-larger-taxonomy.ome.xml: 
   [testng] [2024-12-15 08:42:20,394] [pool-1-thread-2] Initializing /data/public/2013-06/timestampannotation.ome.xml: 
   [testng] [2024-12-15 08:42:21,655] [pool-1-thread-11] Initializing /data/public/2013-06/xmlannotation-body-space.ome.xml: 
   [testng] [2024-12-15 08:42:22,611] [pool-1-thread-6] Initializing /data/public/2010-06/no-date.ome.xml: 
   [testng] [2024-12-15 08:42:23,694] [pool-1-thread-5] Initializing /data/public/2016-06/transformations-downgrade.ome.xml: 
   [testng] [2024-12-15 08:42:24,682] [pool-1-thread-8] Initializing /data/public/2013-06/xmlannotation-multi-value.ome.xml: 
   [testng] [2024-12-15 08:42:25,607] [pool-1-thread-12] Initializing /data/public/2013-06/transformations-downgrade.ome.xml: 
   [testng] [2024-12-15 08:42:29,470] [pool-1-thread-4] Initializing /data/public/2013-06/single-image.ome.xml: 
   [testng] [2024-12-15 08:42:38,148] [pool-1-thread-8] Initializing /data/public/2010-04/one-screen-one-plate-four-wells.ome.xml: 
   [testng] [2024-12-15 08:42:39,314] [pool-1-thread-5] Initializing /data/public/2010-06/z-series.ome.xml: 
   [testng] [2024-12-15 08:42:40,259] [pool-1-thread-10] Initializing /data/public/2010-06/multi-channel-time-series.ome.xml: 
   [testng] [2024-12-15 08:42:41,266] [pool-1-thread-1] Initializing /data/public/2012-06/multi-channel-time-series.ome.xml: 
   [testng] [2024-12-15 08:42:42,242] [pool-1-thread-11] Initializing /data/public/2013-06/z-series.ome.xml: 
   [testng] [2024-12-15 08:42:43,240] [pool-1-thread-6] Initializing /data/public/2015-01/filter.ome.xml: 
   [testng] [2024-12-15 08:42:44,099] [pool-1-thread-12] Initializing /data/public/2016-06/ROI.ome.xml: 
   [testng] [2024-12-15 08:42:45,421] [pool-1-thread-9] Initializing /data/public/2013-06/instrument.ome.xml: 
   [testng] [2024-12-15 08:42:46,868] [pool-1-thread-2] Initializing /data/curtis/black6-7.tif: 
   [testng] [2024-12-15 08:42:53,635] [pool-1-thread-3] Initializing /data/public/2016-06/filter.ome.xml: 
   [testng] [2024-12-15 08:42:58,266] [pool-1-thread-4] Initializing /data/public/2009-09/multi-channel-time-series.ome.xml: 
   [testng] [2024-12-15 08:43:01,441] [pool-1-thread-7] Initializing /data/public/2015-01/xmlannotation-body-space.ome.xml: 
   [testng] [2024-12-15 08:43:05,399] [pool-1-thread-11] Initializing /data/public/2016-06/no-date.ome.xml: 
   [testng] [2024-12-15 08:43:06,430] [pool-1-thread-9] Initializing /data/public/2010-06/time-series.ome.xml: 
   [testng] [2024-12-15 08:43:07,413] [pool-1-thread-6] Initializing /data/curtis/black0.tif: 
   [testng] [2024-12-15 08:43:14,811] [pool-1-thread-3] Initializing /data/samples/test.OME: 
   [testng] [2024-12-15 08:43:15,922] [pool-1-thread-5] Initializing /data/public/2015-01/no-date.ome.xml: 
   [testng] [2024-12-15 08:43:16,808] [pool-1-thread-1] Initializing /data/public/2010-06/single-image.ome.xml: 
   [testng] [2024-12-15 08:43:17,727] [pool-1-thread-10] Initializing /data/public/2008-09/z-series.ome.xml: 
   [testng] [2024-12-15 08:43:18,714] [pool-1-thread-12] Initializing /data/public/2015-01/xmlannotation-multi-value.ome.xml: 
   [testng] [2024-12-15 08:43:19,677] [pool-1-thread-8] Initializing /data/public/2012-06/spim.ome.xml: 
   [testng] [2024-12-15 08:43:23,556] [pool-1-thread-4] Initializing /data/public/2016-06/folders-simple-taxonomy.ome.xml: 
   [testng] [2024-12-15 08:43:26,695] [pool-1-thread-7] Initializing /data/public/2013-06/multi-channel-z-series-time-series.ome.xml: 
   [testng] [2024-12-15 08:43:30,472] [pool-1-thread-11] Initializing /data/public/2010-04/single-image.ome.xml: 
   [testng] [2024-12-15 08:43:31,488] [pool-1-thread-3] Initializing /data/public/2016-06/spim.ome.xml: 
   [testng] [2024-12-15 08:43:32,457] [pool-1-thread-9] Initializing /data/public/2012-06/ROI.ome.xml: 
   [testng] [2024-12-15 08:43:33,837] [pool-1-thread-10] Initializing /data/public/2013-06/time-series.ome.xml: 
   [testng] [2024-12-15 08:43:35,674] [pool-1-thread-1] Initializing /data/public/2016-06/time-series.ome.xml: 
   [testng] [2024-12-15 08:43:37,276] [pool-1-thread-12] Initializing /data/public/2010-06/multi-channel-z-series-time-series.ome.xml: 
   [testng] [2024-12-15 08:43:39,055] [pool-1-thread-5] Initializing /data/public/2013-06/commentannotation.ome.xml: 
   [testng] [2024-12-15 08:43:40,560] [pool-1-thread-8] Initializing /data/public/2011-06/no-date.ome.xml: 
   [testng] [2024-12-15 08:43:45,371] [pool-1-thread-4] Initializing /data/public/2010-06/multi-channel.ome.xml: 
   [testng] [2024-12-15 08:43:51,088] [pool-1-thread-7] Initializing /data/public/2010-06/multi-channel-z-series.ome.xml: 
   [testng] [2024-12-15 08:43:53,756] [pool-1-thread-2] Initializing /data/samples/testImportPlateMultiplePlateAcquisitions1508.ome: 
   [testng] [2024-12-15 08:43:58,155] [pool-1-thread-1] Initializing /data/public/2012-06/metadata-only.ome.xml: 
   [testng] [2024-12-15 08:43:58,999] [pool-1-thread-9] Initializing /data/public/2012-06/single-image.ome.xml: 
   [testng] [2024-12-15 08:43:59,941] [pool-1-thread-8] Initializing /data/public/2015-01/mapannotation.ome.xml: 
   [testng] [2024-12-15 08:44:00,728] [pool-1-thread-11] Initializing /data/samples/Sample-2008_02.ome: 
   [testng] [2024-12-15 08:44:01,610] [pool-1-thread-5] Initializing /data/public/2015-01/multi-channel-z-series-time-series.ome.xml: 
   [testng] [2024-12-15 08:44:02,457] [pool-1-thread-10] Initializing /data/public/2015-01/timestampannotation.ome.xml: 
   [testng] [2024-12-15 08:44:03,303] [pool-1-thread-12] Initializing /data/public/2010-04/z-series-time-series.ome.xml: 
   [testng] [2024-12-15 08:44:04,110] [pool-1-thread-3] Initializing /data/public/2013-06/one-screen-one-plate-four-wells.ome.xml: 
   [testng] [2024-12-15 08:44:06,247] [pool-1-thread-4] Initializing /data/public/2012-06/multi-channel.ome.xml: 
   [testng] [2024-12-15 08:44:13,076] [pool-1-thread-6] Initializing /data/public/2009-09/one-screen-one-plate-four-wells.ome.xml: 
   [testng] [2024-12-15 08:44:14,621] [pool-1-thread-7] Initializing /data/public/2008-09/z-series-time-series.ome.xml: 
   [testng] [2024-12-15 08:44:16,205] [pool-1-thread-2] Initializing /data/public/2012-06/tagannotation.ome.xml: 
   [testng] [2024-12-15 08:44:19,497] [pool-1-thread-11] Initializing /data/public/2010-04/multi-channel-time-series.ome.xml: 
   [testng] [2024-12-15 08:44:20,720] [pool-1-thread-12] Initializing /data/curtis/min-sample-2008-02.ome: 
   [testng] [2024-12-15 08:44:21,967] [pool-1-thread-1] Initializing /data/curtis/black0.ome: 
   [testng] [2024-12-15 08:44:23,263] [pool-1-thread-8] Initializing /data/melissa/large-xml-test.ome: 
   [testng] [2024-12-15 08:44:33,734] [pool-1-thread-9] Initializing /data/curtis/all-black.ome: 
   [testng] [2024-12-15 08:44:35,850] [pool-1-thread-5] Initializing /data/public/2008-09/single-image.ome.xml: 
   [testng] [2024-12-15 08:44:37,883] [pool-1-thread-3] Initializing /data/public/2008-09/multi-channel-z-series.ome.xml: 
   [testng] [2024-12-15 08:44:40,069] [pool-1-thread-10] Initializing /data/public/2015-01/one-screen-one-plate-four-wells.ome.xml: 
   [testng] [2024-12-15 08:44:43,642] [pool-1-thread-4] Initializing /data/public/2011-06/multi-channel.ome.xml: 
   [testng] [2024-12-15 08:44:49,711] [pool-1-thread-6] Initializing /data/public/2013-06/ROI.ome.xml: 
   [testng] [2024-12-15 08:44:51,062] [pool-1-thread-11] Initializing /data/public/2013-06/tagannotation.ome.xml: 
   [testng] [2024-12-15 08:44:52,749] [pool-1-thread-7] Initializing /data/public/2015-01/multi-channel-z-series.ome.xml: 
   [testng] [2024-12-15 08:44:54,105] [pool-1-thread-2] Initializing /data/public/2013-06/z-series-time-series.ome.xml: 
   [testng] [2024-12-15 08:44:57,815] [pool-1-thread-12] Initializing /data/public/2010-06/two-screens-two-plates-four-wells.ome.xml: 
   [testng] [2024-12-15 08:45:01,036] [pool-1-thread-5] Initializing /data/public/2015-01/xmlannotation-svg.ome.xml: 
   [testng] [2024-12-15 08:45:02,384] [pool-1-thread-10] Initializing /data/public/2012-06/multi-channel-z-series.ome.xml: 
   [testng] [2024-12-15 08:45:03,881] [pool-1-thread-9] Initializing /data/public/2016-06/hcs.ome.xml: 
   [testng] [2024-12-15 08:45:05,385] [pool-1-thread-3] Initializing /data/public/2015-01/instrument-units-alternate.ome.xml: 
   [testng] [2024-12-15 08:45:06,826] [pool-1-thread-1] Initializing /data/public/2013-06/multi-channel-z-series.ome.xml: 
   [testng] [2024-12-15 08:45:09,359] [pool-1-thread-4] Initializing /data/public/2015-01/time-series.ome.xml: 
   [testng] [2024-12-15 08:45:11,029] [pool-1-thread-6] Initializing /data/samples/TAABA.ome: 
   [testng] [2024-12-15 08:45:16,691] [pool-1-thread-11] Initializing /data/public/2013-06/two-screens-two-plates-four-wells.ome.xml: 
   [testng] [2024-12-15 08:45:17,687] [pool-1-thread-2] Initializing /data/public/2015-01/hcs.ome.xml: 
   [testng] [2024-12-15 08:45:18,548] [pool-1-thread-7] Initializing /data/public/2008-09/multi-channel.ome.xml: 
   [testng] [2024-12-15 08:45:20,034] [pool-1-thread-12] Initializing /data/public/2016-06/z-series.ome.xml: 
   [testng] [2024-12-15 08:45:21,042] [pool-1-thread-10] Initializing /data/public/2010-04/time-series.ome.xml: 
   [testng] [2024-12-15 08:45:21,983] [pool-1-thread-3] Initializing /data/public/2012-06/xmlannotation-svg.ome.xml: 
   [testng] [2024-12-15 08:45:22,826] [pool-1-thread-5] Initializing /data/public/2016-06/two-screens-two-plates-four-wells.ome.xml: 
   [testng] [2024-12-15 08:45:23,700] [pool-1-thread-1] Initializing /data/public/2015-01/multi-channel.ome.xml: 
   [testng] [2024-12-15 08:45:24,553] [pool-1-thread-9] Initializing /data/public/2009-09/multi-channel-z-series-time-series.ome.xml: 
   [testng] [2024-12-15 08:45:26,637] [pool-1-thread-4] Initializing /data/public/2013-06/transformations-upgrade.ome.xml: 
   [testng] [2024-12-15 08:45:30,125] [pool-1-thread-6] Initializing /data/public/2016-06/instrument-units-default.ome.xml: 
   [testng] [2024-12-15 08:45:31,074] [pool-1-thread-7] Initializing /data/public/2009-09/z-series.ome.xml: 
   [testng] [2024-12-15 08:45:31,960] [pool-1-thread-12] Initializing /data/public/2010-04/two-screens-two-plates-four-wells.ome.xml: 
   [testng] [2024-12-15 08:45:32,839] [pool-1-thread-11] Initializing /data/public/2008-09/multi-pixel-default.ome.xml: 
   [testng] [2024-12-15 08:45:33,739] [pool-1-thread-2] Initializing /data/public/2010-06/xmlannotation-svg.ome.xml: 
   [testng] [2024-12-15 08:45:35,189] [pool-1-thread-10] Initializing /data/public/2016-06/multi-channel-z-series-time-series.ome.xml: 
   [testng] [2024-12-15 08:45:37,071] [pool-1-thread-3] Initializing /data/public/2009-09/multi-channel-z-series.ome.xml: 
   [testng] [2024-12-15 08:45:38,615] [pool-1-thread-5] Initializing /data/public/2016-06/xmlannotation-body-space.ome.xml: 
   [testng] [2024-12-15 08:45:41,593] [pool-1-thread-1] Initializing /data/public/2010-04/multi-channel-z-series-time-series.ome.xml: 
   [testng] [2024-12-15 08:45:42,928] [pool-1-thread-9] Initializing /data/public/2013-06/no-date.ome.xml: 
   [testng] [2024-12-15 08:45:46,319] [pool-1-thread-4] Initializing /data/public/2009-09/time-series.ome.xml: 
   [testng] [2024-12-15 08:45:47,352] [pool-1-thread-11] Initializing /data/samples/Antarctic_Diatom_D3D_01.ome: 
   [testng] [2024-12-15 08:45:48,667] [pool-1-thread-7] Initializing /data/public/2013-06/spim.ome.xml: 
   [testng] [2024-12-15 08:45:49,625] [pool-1-thread-6] Initializing /data/public/2011-06/multi-channel-time-series.ome.xml: 
   [testng] [2024-12-15 08:45:50,430] [pool-1-thread-2] Initializing /data/public/2010-04/filter.ome.xml: 
   [testng] [2024-12-15 08:45:51,642] [pool-1-thread-12] Initializing /data/public/2016-06/one-screen-one-plate-four-wells.ome.xml: 
   [testng] [2024-12-15 08:45:52,581] [pool-1-thread-3] Initializing /data/public/2016-06/multi-channel.ome.xml: 
   [testng] [2024-12-15 08:45:53,567] [pool-1-thread-10] Initializing /data/public/2011-06/metadata-only.ome.xml: 
   [testng] [2024-12-15 08:45:54,434] [pool-1-thread-5] Initializing /data/public/2016-06/tagannotation.ome.xml: 
   [testng] [2024-12-15 08:45:58,978] [pool-1-thread-9] Initializing /data/public/2015-01/tagannotation.ome.xml: 
   [testng] [2024-12-15 08:45:59,870] [pool-1-thread-4] Initializing /data/public/2015-01/metadata-only.ome.xml: 
   [testng] [2024-12-15 08:46:00,725] [pool-1-thread-1] Initializing /data/public/2016-06/timestampannotation-posix-only.ome.xml: 
   [testng] [2024-12-15 08:46:01,496] [pool-1-thread-2] Initializing /data/public/2015-01/timestampannotation-posix-only.ome.xml: 
   [testng] [2024-12-15 08:46:02,286] [pool-1-thread-12] Initializing /data/public/2012-06/one-screen-one-plate-four-wells.ome.xml: 
   [testng] [2024-12-15 08:46:03,072] [pool-1-thread-6] Initializing /data/public/2008-09/dataset-group-project.ome.xml: 
   [testng] [2024-12-15 08:46:04,042] [pool-1-thread-7] Initializing /data/public/2016-06/multi-channel-z-series.ome.xml: 
   [testng] [2024-12-15 08:46:06,222] [pool-1-thread-8] Initializing /data/public/2010-06/metadata-only.ome.xml: 
   [testng] [2024-12-15 08:46:09,870] [pool-1-thread-11] Initializing /data/public/2010-04/metadata-only.ome.xml: 
   [testng] [2024-12-15 08:46:11,811] [pool-1-thread-5] Initializing /data/public/2016-06/multi-channel-time-series.ome.xml: 
   [testng] [2024-12-15 08:46:12,884] [pool-1-thread-3] Initializing /data/public/2016-06/metadata-only.ome.xml: 
   [testng] [2024-12-15 08:46:13,863] [pool-1-thread-10] Initializing /data/public/2012-06/transformations-upgrade.ome.xml: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 10706, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 12 minutes 54 seconds
Finished: SUCCESS