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Started by upstream project "BIOFORMATS-test-repo" build number 292 originally caused by: Started by upstream project "Trigger" build number 311 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins11011652062572734951.sh + '[' fei = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_46105_merge_ci -v /uod/idr/repos/curated/fei:/data -v /uod/idr-scratch/merge-ci/curated/fei:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 00:40:27,353 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:40:27,394 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:40:27,421 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:40:27,422 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:40:27,430 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:40:27,430 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:40:27,430 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:40:27,431 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:40:27,431 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1139b2f3 - End of configuration. [testng] 00:40:27,432 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@3f197a46 - Registering current configuration as safe fallback point [testng] 00:40:27,432 |-INFO in ch.qos.logback.classic.util.ContextInitializer@636be97c - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 397 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-16 00:40:27,441] [main] java.version = 1.8.0_342 [testng] 00:40:27,445 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:40:27,445 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:40:27,490 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-16_00-40-27.log] [testng] 00:40:27,491 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-12-16 00:40:27,493] [main] testng.directory = /data [testng] [2024-12-16 00:40:27,493] [main] testng.configDirectory = /config [testng] [2024-12-16 00:40:27,505] [main] testng.multiplier = 1.0 [testng] [2024-12-16 00:40:27,506] [main] testng.in-memory = false [testng] [2024-12-16 00:40:27,506] [main] testng.allow-missing = false [testng] [2024-12-16 00:40:27,506] [main] user.language = fr [testng] [2024-12-16 00:40:27,506] [main] user.country = FR [testng] [2024-12-16 00:40:27,506] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-12-16 00:40:39,438] [main] ---------------------------------------- [testng] [2024-12-16 00:40:39,438] [main] Total files: 21 [testng] [2024-12-16 00:40:39,438] [main] Scan time: 11.932 s (568 ms/file) [testng] [2024-12-16 00:40:39,438] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 18 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-16 00:41:20,421] [pool-1-thread-1] Initializing /data/antoine/Tile_001-002-000_0-000.tif: [testng] 00:41:20,421 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:41:20,421 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:41:20,422 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-16_00-41-20.log] [testng] 00:41:20,423 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d64e641 - End of configuration. [testng] [2024-12-16 00:41:21,818] [pool-1-thread-12] Initializing /data/venu/VENU_Eight.TIF: [testng] 00:41:21,819 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:41:21,819 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:41:21,819 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-16_00-41-21.log] [testng] 00:41:21,820 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6bc2521a - End of configuration. [testng] [2024-12-16 00:41:23,557] [pool-1-thread-11] Initializing /data/venu/VENU01.IMG: [testng] 00:41:23,558 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:41:23,558 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:41:23,558 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-16_00-41-23.log] [testng] 00:41:23,559 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e9628d9 - End of configuration. [testng] [2024-12-16 00:41:24,136] [pool-1-thread-10] Initializing /data/venu/VENU_Six.TIF: [testng] 00:41:24,136 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:41:24,136 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:41:24,137 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-16_00-41-24.log] [testng] 00:41:24,137 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3dd698fb - End of configuration. [testng] [2024-12-16 00:41:25,774] [pool-1-thread-9] Initializing /data/venu/VENU_Four.TIF: [testng] 00:41:25,775 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:41:25,775 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:41:25,775 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-16_00-41-25.log] [testng] 00:41:25,776 |-INFO in ch.qos.logback.core.sift.SiftProcessor@155d8874 - End of configuration. [testng] [2024-12-16 00:41:27,597] [pool-1-thread-8] Initializing /data/venu/VENU01.TIF: [testng] 00:41:27,597 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:41:27,598 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:41:27,598 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-16_00-41-27.log] [testng] 00:41:27,598 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15a532e0 - End of configuration. [testng] [2024-12-16 00:41:29,868] [pool-1-thread-7] Initializing /data/venu/VENU_Five.TIF: [testng] 00:41:29,868 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:41:29,868 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:41:29,869 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-16_00-41-29.log] [testng] 00:41:29,870 |-INFO in ch.qos.logback.core.sift.SiftProcessor@310ee736 - End of configuration. [testng] [2024-12-16 00:41:32,035] [pool-1-thread-6] Initializing /data/venu/VENU_Seven.TIF: [testng] 00:41:32,035 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:41:32,035 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:41:32,035 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-16_00-41-32.log] [testng] 00:41:32,036 |-INFO in ch.qos.logback.core.sift.SiftProcessor@73b0116b - End of configuration. [testng] [2024-12-16 00:41:34,421] [pool-1-thread-5] Initializing /data/steffen/Batman_008.tif: [testng] 00:41:34,421 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:41:34,421 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:41:34,422 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-16_00-41-34.log] [testng] 00:41:34,423 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6ba12933 - End of configuration. [testng] [2024-12-16 00:41:36,682] [pool-1-thread-4] Initializing /data/qa-4264/08.51.17 CCD Acquire-Acquire CCD Image Display-Acquire CCD -0.tif: [testng] 00:41:36,682 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:41:36,682 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:41:36,683 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-16_00-41-36.log] [testng] 00:41:36,683 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d2bb2cc - End of configuration. [testng] [2024-12-16 00:41:38,828] [pool-1-thread-3] Initializing /data/qa-11061/Tile_020-009-000_0.tif: [testng] 00:41:38,828 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:41:38,828 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:41:38,829 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-16_00-41-38.log] [testng] 00:41:38,829 |-INFO in ch.qos.logback.core.sift.SiftProcessor@285a44c7 - End of configuration. [testng] [2024-12-16 00:41:41,395] [pool-1-thread-2] Initializing /data/venu/VENU02.TIF: [testng] 00:41:41,395 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:41:41,395 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:41:41,396 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-16_00-41-41.log] [testng] 00:41:41,396 |-INFO in ch.qos.logback.core.sift.SiftProcessor@169a8fea - End of configuration. [testng] [2024-12-16 00:41:51,691] [pool-1-thread-11] Initializing /data/venu/VENU03.IMG: [testng] [2024-12-16 00:42:01,190] [pool-1-thread-9] Initializing /data/peter/ZC_PTCS_ED_1000x_002.tif: [testng] [2024-12-16 00:42:03,733] [pool-1-thread-5] Initializing /data/venu/VENU02.IMG: [testng] [2024-12-16 00:42:04,416] [pool-1-thread-7] Initializing /data/venu/VENU.TIF: [testng] [2024-12-16 00:42:06,817] [pool-1-thread-12] Initializing /data/venu/VENU03.TIF: [testng] [2024-12-16 00:42:09,316] [pool-1-thread-10] Initializing /data/qa-10514/TITAN_FEI_TIFF_Test_Image.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 954, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 2 minutes 0 seconds Finished: SUCCESS