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Started by upstream project "BIOFORMATS-test-repo" build number 292 originally caused by: Started by upstream project "Trigger" build number 311 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins17042475445453518334.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_46119_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:00:06,234 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:00:06,236 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service. [testng] 01:00:06,236 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:00:06,237 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:00:06,237 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:00:06,237 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:00:06,238 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:00:06,238 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:00:06,238 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:00:06,238 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:00:06,238 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:00:06,239 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:00:06,476 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:00:06,476 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:00:06,514 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:00:06,514 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:00:06,525 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:00:06,525 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:00:06,526 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:00:06,526 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:00:06,526 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration. [testng] 01:00:06,528 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point [testng] 01:00:06,528 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 290 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-16 01:00:06,540] [main] java.version = 1.8.0_342 [testng] 01:00:06,543 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:00:06,543 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:00:06,588 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-16_01-00-06.log] [testng] 01:00:06,590 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-12-16 01:00:06,592] [main] testng.directory = /data [testng] [2024-12-16 01:00:06,592] [main] testng.configDirectory = /config [testng] [2024-12-16 01:00:06,605] [main] testng.multiplier = 1.0 [testng] [2024-12-16 01:00:06,605] [main] testng.in-memory = false [testng] [2024-12-16 01:00:06,605] [main] testng.allow-missing = false [testng] [2024-12-16 01:00:06,605] [main] user.language = fr [testng] [2024-12-16 01:00:06,605] [main] user.country = FR [testng] [2024-12-16 01:00:06,605] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-12-16 01:01:08,233] [main] ---------------------------------------- [testng] [2024-12-16 01:01:08,233] [main] Total files: 259 [testng] [2024-12-16 01:01:08,233] [main] Scan time: 61.628 s (237 ms/file) [testng] [2024-12-16 01:01:08,233] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-16 01:19:03,182] [pool-1-thread-1] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] 01:19:03,182 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:19:03,183 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:19:03,184 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-16_01-19-03.log] [testng] 01:19:03,184 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17a01923 - End of configuration. [testng] [2024-12-16 01:19:08,658] [pool-1-thread-12] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] 01:19:08,658 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:19:08,658 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:19:08,659 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-16_01-19-08.log] [testng] 01:19:08,659 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2615d504 - End of configuration. [testng] [2024-12-16 01:19:09,766] [pool-1-thread-11] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] 01:19:09,766 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:19:09,767 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:19:09,767 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-16_01-19-09.log] [testng] 01:19:09,768 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14a624 - End of configuration. [testng] [2024-12-16 01:19:28,456] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] 01:19:28,456 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:19:28,456 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:19:28,457 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-16_01-19-28.log] [testng] 01:19:28,458 |-INFO in ch.qos.logback.core.sift.SiftProcessor@713b511c - End of configuration. [testng] [2024-12-16 01:19:30,386] [pool-1-thread-9] Initializing /data/pedro/plv-test.oib: [testng] 01:19:30,386 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:19:30,386 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:19:30,387 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-16_01-19-30.log] [testng] 01:19:30,387 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a8dbd95 - End of configuration. [testng] [2024-12-16 01:19:31,646] [pool-1-thread-8] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] 01:19:31,647 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:19:31,647 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:19:31,647 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-16_01-19-31.log] [testng] 01:19:31,648 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72fc54a2 - End of configuration. [testng] [2024-12-16 01:19:33,295] [pool-1-thread-7] Initializing /data/molly/11OCT4.OIF: [testng] 01:19:33,295 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:19:33,295 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:19:33,296 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-16_01-19-33.log] [testng] 01:19:33,296 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c1abe9b - End of configuration. [testng] [2024-12-16 01:20:04,557] [pool-1-thread-6] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] 01:20:04,557 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:20:04,557 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:04,558 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-16_01-20-04.log] [testng] 01:20:04,558 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2845ae4a - End of configuration. [testng] [2024-12-16 01:20:05,609] [pool-1-thread-5] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] 01:20:05,609 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:20:05,609 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:05,610 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-16_01-20-05.log] [testng] 01:20:05,610 |-INFO in ch.qos.logback.core.sift.SiftProcessor@45883a6f - End of configuration. [testng] [2024-12-16 01:20:06,891] [pool-1-thread-4] Initializing /data/molly/11OCT5.OIF: [testng] 01:20:06,891 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:20:06,891 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:06,892 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-16_01-20-06.log] [testng] 01:20:06,892 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c27957a - End of configuration. [testng] [2024-12-16 01:20:31,179] [pool-1-thread-3] Initializing /data/glen/Null file/test no change.oif: [testng] 01:20:31,179 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:20:31,179 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:31,180 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-16_01-20-31.log] [testng] 01:20:31,180 |-INFO in ch.qos.logback.core.sift.SiftProcessor@352e0d7e - End of configuration. [testng] [2024-12-16 01:20:33,114] [pool-1-thread-2] Initializing /data/sten/01.oib: [testng] 01:20:33,114 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:20:33,114 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:33,115 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-16_01-20-33.log] [testng] 01:20:33,115 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a7ad952 - End of configuration. [testng] [2024-12-16 01:20:49,306] [pool-1-thread-12] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2024-12-16 01:20:49,819] [pool-1-thread-8] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2024-12-16 01:20:53,135] [pool-1-thread-2] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2024-12-16 01:21:00,152] [pool-1-thread-9] Initializing /data/glen/seqlinestack.oif: [testng] [2024-12-16 01:21:17,325] [pool-1-thread-6] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-12-16 01:21:18,810] [pool-1-thread-10] Initializing /data/johannes/step5b.bmp: [testng] [2024-12-16 01:21:23,989] [pool-1-thread-12] Initializing /data/michael/CELL3.oib: [testng] [2024-12-16 01:21:26,628] [pool-1-thread-10] Initializing /data/brian/Lambda10nm.oib: [testng] [2024-12-16 01:21:34,600] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2024-12-16 01:21:41,072] [pool-1-thread-12] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2024-12-16 01:21:46,865] [pool-1-thread-10] Initializing /data/molly/11OCT3.OIF: [testng] [2024-12-16 01:24:31,164] [pool-1-thread-6] Initializing /data/glen/simulstack.oib: [testng] [2024-12-16 01:24:34,248] [pool-1-thread-12] Initializing /data/molly/11OCT6.OIF: [testng] [2024-12-16 01:25:21,704] [pool-1-thread-5] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2024-12-16 01:25:24,009] [pool-1-thread-3] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-12-16 01:25:32,043] [pool-1-thread-6] Initializing /data/glen/singleseqline.oib: [testng] [2024-12-16 01:25:35,994] [pool-1-thread-8] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-12-16 01:25:38,083] [pool-1-thread-3] Initializing /data/monica/Image0056.oif: [testng] [2024-12-16 01:25:41,208] [pool-1-thread-5] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2024-12-16 01:25:49,196] [pool-1-thread-6] Initializing /data/francesco/fGfp.c15.oib: [testng] [2024-12-16 01:25:54,702] [pool-1-thread-8] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2024-12-16 01:26:02,335] [pool-1-thread-5] Initializing /data/brian/PA-GFP-3.oib: [testng] [2024-12-16 01:26:11,113] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-12-16 01:26:18,208] [pool-1-thread-5] Initializing /data/glen/111407.oif: [testng] [2024-12-16 01:26:40,286] [pool-1-thread-6] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2024-12-16 01:27:00,286] [pool-1-thread-8] Initializing /data/glen/singleseqframe.oif: [testng] [2024-12-16 01:27:59,065] [pool-1-thread-3] Initializing /data/glen/notsaturated.oif: [testng] [2024-12-16 01:29:07,596] [pool-1-thread-8] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-12-16 01:29:24,245] [pool-1-thread-8] Initializing /data/brian/CFP-GFP2.oib: [testng] [2024-12-16 01:29:36,869] [pool-1-thread-8] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2024-12-16 01:29:48,151] [pool-1-thread-8] Initializing /data/glen/Image0002.oif: [testng] [2024-12-16 01:42:46,941] [pool-1-thread-2] Initializing /data/glen/singleseqframe.oib: [testng] [2024-12-16 01:42:58,174] [pool-1-thread-2] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2024-12-16 01:43:09,454] [pool-1-thread-2] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2024-12-16 01:45:50,808] [pool-1-thread-1] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2024-12-16 01:45:59,645] [pool-1-thread-1] Initializing /data/marc/V0606J.oib: [testng] [2024-12-16 01:46:19,962] [pool-1-thread-1] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] [2024-12-16 01:46:46,452] [pool-1-thread-3] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2024-12-16 01:46:52,573] [pool-1-thread-3] Initializing /data/tom/zseries-test.oib: [testng] [2024-12-16 01:47:08,160] [pool-1-thread-3] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2024-12-16 01:47:17,394] [pool-1-thread-3] Initializing /data/yasunori/series_1.oib: [testng] [2024-12-16 01:47:26,869] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2024-12-16 01:47:39,432] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-12-16 01:47:50,304] [pool-1-thread-3] Initializing /data/johannes/step2.bmp: [testng] [2024-12-16 01:47:53,892] [pool-1-thread-3] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2024-12-16 01:48:04,807] [pool-1-thread-3] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2024-12-16 01:48:07,880] [pool-1-thread-1] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2024-12-16 01:48:18,531] [pool-1-thread-1] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2024-12-16 01:50:50,070] [pool-1-thread-2] Initializing /data/aryeh/030408 2 1.oib: [testng] [2024-12-16 01:50:58,192] [pool-1-thread-2] Initializing /data/david/Image0016.oif: [testng] [2024-12-16 01:53:12,348] [pool-1-thread-3] Initializing /data/molly/11OCT2.OIF: [testng] [2024-12-16 01:53:57,507] [pool-1-thread-2] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-12-16 01:54:03,372] [pool-1-thread-1] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2024-12-16 01:54:42,503] [pool-1-thread-1] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-12-16 01:55:48,909] [pool-1-thread-1] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-12-16 01:55:57,677] [pool-1-thread-1] Initializing /data/brian/lambda02nm.oib: [testng] [2024-12-16 01:56:07,503] [pool-1-thread-1] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2024-12-16 01:56:21,418] [pool-1-thread-1] Initializing /data/karl/Image0009.oib: [testng] [2024-12-16 01:56:28,127] [pool-1-thread-1] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] [2024-12-16 01:56:37,767] [pool-1-thread-1] Initializing /data/glen/4205basal106072.oif: [testng] [2024-12-16 01:57:22,608] [pool-1-thread-5] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-12-16 01:57:30,246] [pool-1-thread-5] Initializing /data/glen/seqlinestack.oib: [testng] [2024-12-16 01:57:39,400] [pool-1-thread-5] Initializing /data/glen/singlesimul.oib: [testng] [2024-12-16 01:57:47,096] [pool-1-thread-5] Initializing /data/molly/11OCT9.OIF: [testng] [2024-12-16 01:58:49,740] [pool-1-thread-2] Initializing /data/aryeh/1h.oib: [testng] [2024-12-16 01:59:06,435] [pool-1-thread-2] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2024-12-16 01:59:17,865] [pool-1-thread-2] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-12-16 01:59:28,882] [pool-1-thread-2] Initializing /data/glen/notsaturated.oib: [testng] [2024-12-16 01:59:47,504] [pool-1-thread-2] Initializing /data/brian/FLIP.oib: [testng] [2024-12-16 02:00:06,495] [pool-1-thread-2] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2024-12-16 02:00:25,539] [pool-1-thread-2] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-12-16 02:00:42,160] [pool-1-thread-2] Initializing /data/simon/never_worked.oib: [testng] [2024-12-16 02:00:57,512] [pool-1-thread-2] Initializing /data/johannes/step1.bmp: [testng] [2024-12-16 02:01:04,248] [pool-1-thread-2] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2024-12-16 02:01:22,080] [pool-1-thread-2] Initializing /data/kay/IM2pg.oib: [testng] [2024-12-16 02:01:38,478] [pool-1-thread-2] Initializing /data/stefan/cytosol_03e.oib: [testng] [2024-12-16 02:01:58,252] [pool-1-thread-2] Initializing /data/molly/11OCT8.OIF: [testng] [2024-12-16 02:04:24,544] [pool-1-thread-7] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2024-12-16 02:04:38,743] [pool-1-thread-7] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-12-16 02:04:54,424] [pool-1-thread-7] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2024-12-16 02:05:08,707] [pool-1-thread-7] Initializing /data/qa-17748/Image0079.oib: [testng] [2024-12-16 02:05:18,208] [pool-1-thread-4] Initializing /data/glen/singleseqline.oif: [testng] [2024-12-16 02:05:23,959] [pool-1-thread-7] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-12-16 02:05:40,444] [pool-1-thread-7] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2024-12-16 02:05:53,354] [pool-1-thread-7] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-12-16 02:06:06,222] [pool-1-thread-7] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2024-12-16 02:06:18,793] [pool-1-thread-7] Initializing /data/yoshihito/XY.oif: [testng] [2024-12-16 02:07:23,920] [pool-1-thread-7] Initializing /data/stefan/cytosol_01a.oif: [testng] [2024-12-16 02:11:23,866] [pool-1-thread-8] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2024-12-16 02:11:32,522] [pool-1-thread-4] Initializing /data/david/Image0016.oib: [testng] [2024-12-16 02:11:37,320] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2024-12-16 02:11:46,091] [pool-1-thread-4] Initializing /data/molly/11OCT7.OIF: [testng] [2024-12-16 02:12:26,306] [pool-1-thread-8] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2024-12-16 02:12:39,180] [pool-1-thread-8] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-12-16 02:13:35,328] [pool-1-thread-6] Initializing /data/allan/62909#1.oib: [testng] [2024-12-16 02:13:47,085] [pool-1-thread-6] Initializing /data/molly/11OCT11.OIF: [testng] [2024-12-16 02:18:44,987] [pool-1-thread-12] Initializing /data/glen/simulstack.oif: [testng] [2024-12-16 02:20:58,975] [pool-1-thread-9] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-12-16 02:21:08,650] [pool-1-thread-9] Initializing /data/molly/11OCT10.OIF: [testng] [2024-12-16 02:27:26,830] [pool-1-thread-11] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-12-16 02:27:38,691] [pool-1-thread-11] Initializing /data/christian/20min.oif: [testng] [2024-12-16 02:28:41,752] [pool-1-thread-11] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2024-12-16 02:28:56,656] [pool-1-thread-11] Initializing /data/aryeh/control_test.oib: [testng] [2024-12-16 02:29:31,876] [pool-1-thread-11] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-12-16 02:32:01,474] [pool-1-thread-11] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-12-16 02:38:55,927] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-12-16 02:39:08,598] [pool-1-thread-8] Initializing /data/qa-17748/Image0098.oib: [testng] [2024-12-16 02:39:18,839] [pool-1-thread-8] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-12-16 02:39:29,431] [pool-1-thread-8] Initializing /data/tom/RGB-1.avi: [testng] [2024-12-16 02:39:34,999] [pool-1-thread-8] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-12-16 02:39:46,796] [pool-1-thread-8] Initializing /data/brian/Kaede15.oib: [testng] [2024-12-16 02:39:57,273] [pool-1-thread-8] Initializing /data/stefan/cytosol_08b.oif: [testng] [2024-12-16 02:53:27,562] [pool-1-thread-12] Initializing /data/glen/Null file/test change.oif: [testng] [2024-12-16 02:54:25,005] [pool-1-thread-12] Initializing /data/yoshihito/XY.oib: [testng] [2024-12-16 02:54:31,811] [pool-1-thread-12] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2024-12-16 02:54:51,808] [pool-1-thread-2] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-12-16 02:55:00,454] [pool-1-thread-2] Initializing /data/johannes/step4.bmp: [testng] [2024-12-16 02:55:03,937] [pool-1-thread-2] Initializing /data/johannes/step4b.bmp: [testng] [2024-12-16 02:55:07,614] [pool-1-thread-2] Initializing /data/simon/used_to_work.oib: [testng] [2024-12-16 02:55:18,263] [pool-1-thread-2] Initializing /data/johannes/step3.bmp: [testng] [2024-12-16 02:55:21,974] [pool-1-thread-2] Initializing /data/chris/missegragation-15.oib: [testng] [2024-12-16 02:55:29,424] [pool-1-thread-2] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2024-12-16 02:55:49,830] [pool-1-thread-2] Initializing /data/stefan/yc2_live-03.oib: [testng] [2024-12-16 02:56:04,810] [pool-1-thread-2] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-12-16 02:56:16,013] [pool-1-thread-2] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2024-12-16 02:57:32,920] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-12-16 02:57:42,942] [pool-1-thread-4] Initializing /data/jae/Image0001.oib: [testng] [2024-12-16 02:57:44,843] [pool-1-thread-1] Initializing /data/glen/singlesimul.oif: [testng] [2024-12-16 02:57:56,248] [pool-1-thread-4] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2024-12-16 02:59:28,819] [pool-1-thread-1] Initializing /data/marc/V0606L.oib: [testng] [2024-12-16 02:59:55,123] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2024-12-16 03:00:09,539] [pool-1-thread-1] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] 03:09:05,731 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 03:09:05,731 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:09:05,731 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-16_03-09-05.log] [testng] 03:09:05,732 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47119076 - End of configuration. [testng] 03:13:14,739 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 03:13:14,739 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:13:14,741 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-16_03-13-14.log] [testng] 03:13:14,741 |-INFO in ch.qos.logback.core.sift.SiftProcessor@70cd9d21 - End of configuration. [testng] 04:15:19,492 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 04:15:19,492 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:15:19,495 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-16_04-15-19.log] [testng] 04:15:19,495 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f8a2be7 - End of configuration. [testng] 05:35:44,598 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 05:35:44,598 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:35:44,599 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-16_05-35-44.log] [testng] 05:35:44,599 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1bf57bf3 - End of configuration. [testng] 05:51:30,022 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 05:51:30,022 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:51:30,023 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-16_05-51-30.log] [testng] 05:51:30,023 |-INFO in ch.qos.logback.core.sift.SiftProcessor@43b5fae2 - End of configuration. [testng] 06:12:16,581 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 06:12:16,581 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:12:16,582 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-16_06-12-16.log] [testng] 06:12:16,582 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3212ff1b - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 312 minutes 13 seconds Finished: SUCCESS