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Started by upstream project "BIOFORMATS-test-repo" build number 293 originally caused by: Started by upstream project "Trigger" build number 312 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3 [BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins13362132533123053760.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_46254_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 00:23:49,690 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:23:49,692 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service. [testng] 00:23:49,692 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:23:49,693 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:23:49,693 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:23:49,693 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:23:49,694 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:23:49,694 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:23:49,694 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:23:49,695 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:23:49,695 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:23:49,695 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:23:49,867 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:23:49,867 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:23:49,891 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:23:49,891 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:23:49,897 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:23:49,897 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:23:49,897 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:23:49,897 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:23:49,897 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration. [testng] 00:23:49,898 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point [testng] 00:23:49,898 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 204 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-17 00:23:49,907] [main] java.version = 11.0.16 [testng] 00:23:49,911 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:23:49,911 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:49,953 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-17_00-23-49.log] [testng] 00:23:49,955 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2024-12-17 00:23:49,957] [main] testng.directory = /data [testng] [2024-12-17 00:23:49,957] [main] testng.configDirectory = /config [testng] [2024-12-17 00:23:49,967] [main] testng.multiplier = 1.0 [testng] [2024-12-17 00:23:49,968] [main] testng.in-memory = false [testng] [2024-12-17 00:23:49,968] [main] testng.allow-missing = false [testng] [2024-12-17 00:23:49,968] [main] user.language = en [testng] [2024-12-17 00:23:49,968] [main] user.country = ${user.country} [testng] [2024-12-17 00:23:49,968] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-12-17 00:28:29,016] [main] ---------------------------------------- [testng] [2024-12-17 00:28:29,016] [main] Total files: 4426 [testng] [2024-12-17 00:28:29,016] [main] Scan time: 279.048 s (63 ms/file) [testng] [2024-12-17 00:28:29,017] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 722 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-17 01:20:22,257] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x48.tiff: [testng] 01:20:22,258 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:20:22,258 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:22,260 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-17_01-20-22.log] [testng] 01:20:22,261 |-INFO in ch.qos.logback.core.sift.SiftProcessor@68d138a6 - End of configuration. [testng] [2024-12-17 01:20:27,347] [pool-1-thread-12] Initializing /data/misc/mri-old.mov: [testng] 01:20:27,348 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:20:27,348 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:27,348 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-17_01-20-27.log] [testng] 01:20:27,349 |-INFO in ch.qos.logback.core.sift.SiftProcessor@76c3d019 - End of configuration. [testng] [2024-12-17 01:20:28,493] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z017.tif: [testng] 01:20:28,493 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:20:28,493 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:28,494 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-17_01-20-28.log] [testng] 01:20:28,495 |-INFO in ch.qos.logback.core.sift.SiftProcessor@63cc6056 - End of configuration. [testng] [2024-12-17 01:20:32,106] [pool-1-thread-10] Initializing /data/boguslaw/Arabidopsis.tiff: [testng] 01:20:32,106 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:20:32,106 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:32,107 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-17_01-20-32.log] [testng] 01:20:32,107 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f3978a2 - End of configuration. [testng] [2024-12-17 01:20:37,061] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0250.TIF: [testng] 01:20:37,061 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:20:37,061 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:37,062 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-17_01-20-37.log] [testng] 01:20:37,062 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e5e51fa - End of configuration. [testng] [2024-12-17 01:20:41,287] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z041.tif: [testng] 01:20:41,287 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:20:41,287 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:41,287 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-17_01-20-41.log] [testng] 01:20:41,288 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7cdeea6a - End of configuration. [testng] [2024-12-17 01:20:45,742] [pool-1-thread-7] Initializing /data/ascb/CYT-93_PasolliMouse1c_4800.tif: [testng] 01:20:45,742 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:20:45,742 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:45,743 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-17_01-20-45.log] [testng] 01:20:45,743 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6085b3a1 - End of configuration. [testng] [2024-12-17 01:20:50,827] [pool-1-thread-6] Initializing /data/public/libtiff/jello.tif: [testng] 01:20:50,828 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:20:50,828 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:50,828 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-17_01-20-50.log] [testng] 01:20:50,829 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3bcd56cd - End of configuration. [testng] [2024-12-17 01:20:54,669] [pool-1-thread-5] Initializing /data/boguslaw/Arabidopsis_large.tif: [testng] 01:20:54,670 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:20:54,670 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:54,670 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-17_01-20-54.log] [testng] 01:20:54,671 |-INFO in ch.qos.logback.core.sift.SiftProcessor@31e75c28 - End of configuration. [testng] [2024-12-17 01:20:58,479] [pool-1-thread-4] Initializing /data/josiah/cell-Z14.C1.tiff: [testng] 01:20:58,479 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:20:58,479 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:58,479 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-17_01-20-58.log] [testng] 01:20:58,480 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21364aba - End of configuration. [testng] [2024-12-17 01:21:03,779] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z029.tif: [testng] 01:21:03,779 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:21:03,779 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:03,780 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-17_01-21-03.log] [testng] 01:21:03,780 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7181b13 - End of configuration. [testng] [2024-12-17 01:21:06,822] [pool-1-thread-2] Initializing /data/imagesc-82872/WT_Uninfected_top_right.tiff: [testng] 01:21:06,822 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:21:06,822 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:06,823 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-17_01-21-06.log] [testng] 01:21:06,823 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71a5a32d - End of configuration. [testng] [2024-12-17 01:21:22,049] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x32.tiff: [testng] [2024-12-17 01:21:37,851] [pool-1-thread-1] Initializing /data/josiah/cell-Z4.C0.tiff: [testng] [2024-12-17 01:21:39,894] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z035.tif: [testng] [2024-12-17 01:21:42,150] [pool-1-thread-4] Initializing /data/josiah/cell-Z14.C0.tiff: [testng] [2024-12-17 01:21:45,379] [pool-1-thread-10] Initializing /data/ascb/bad/FND-19_FawcettPhillipsSuccessive_4800.tif: [testng] [2024-12-17 01:21:48,434] [pool-1-thread-3] Initializing /data/josiah/cell-Z6.C1.tiff: [testng] [2024-12-17 01:21:51,440] [pool-1-thread-5] Initializing /data/julien/MarjorieCoisy1.TIF: [testng] [2024-12-17 01:21:54,733] [pool-1-thread-9] Initializing /data/josh/stack.tif: [testng] [2024-12-17 01:22:00,568] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z036.tif: [testng] [2024-12-17 01:22:03,927] [pool-1-thread-2] Initializing /data/public/condensation/C4.pattern7.tif: [testng] [2024-12-17 01:22:08,938] [pool-1-thread-7] Initializing /data/josiah/cell-Z18.C1.tiff: [testng] [2024-12-17 01:22:11,930] [pool-1-thread-11] Initializing /data/samples/cielab/Ski_TC8-03_sRGB_lab.tif: [testng] [2024-12-17 01:22:15,584] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z002.tif: [testng] [2024-12-17 01:22:39,082] [pool-1-thread-6] Initializing /data/kelsey/Live-Dead Assay 4000 nm pitch PU.TIF: [testng] [2024-12-17 01:22:42,049] [pool-1-thread-8] Initializing /data/public/libtiff/dscf0013.tif: [testng] [2024-12-17 01:22:45,324] [pool-1-thread-12] Initializing /data/tom-kazimiers/crop_two_chan.tiff: [testng] [2024-12-17 01:22:46,406] [pool-1-thread-2] Initializing /data/wayne/Rockies-rgb.tif: [testng] [2024-12-17 01:22:48,795] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C0_Z012.tif: [testng] [2024-12-17 01:22:51,064] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0207.TIF: [testng] [2024-12-17 01:22:52,538] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0227.TIF: [testng] [2024-12-17 01:22:56,442] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z043.tif: [testng] [2024-12-17 01:22:59,767] [pool-1-thread-9] Initializing /data/josiah/cell-Z33.C1.tiff: [testng] [2024-12-17 01:23:02,806] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-64.tiff: [testng] [2024-12-17 01:23:05,083] [pool-1-thread-11] Initializing /data/glen/6307wmmidb4237m_cmle.tif: [testng] [2024-12-17 01:23:07,847] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z050.tif: [testng] [2024-12-17 01:23:35,904] [pool-1-thread-12] Initializing /data/public/condensation/E4.pattern7.tif: [testng] [2024-12-17 01:23:39,965] [pool-1-thread-7] Initializing /data/sub-resolution/Leica-2/Leica-2-subifds.tiff: [testng] [2024-12-17 01:23:51,046] [pool-1-thread-5] Initializing /data/ascb/CYT-55_HowellGolgiRibbonOutlined_4800.tif: [testng] [2024-12-17 01:24:06,165] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z026.tif: [testng] [2024-12-17 01:24:16,748] [pool-1-thread-6] Initializing /data/kevino/_BF_00001.tif: [testng] [2024-12-17 01:24:30,856] [pool-1-thread-10] Initializing /data/stephane/test sortie_t0000_z0000.tif: [testng] [2024-12-17 01:24:44,548] [pool-1-thread-1] Initializing /data/tom/TLD - n000000_Stamp.tif: [testng] [2024-12-17 01:24:52,744] [pool-1-thread-2] Initializing /data/public/condensation/A5.pattern4.tif: [testng] [2024-12-17 01:25:07,842] [pool-1-thread-11] Initializing /data/josiah/cell-Z39.C1.tiff: [testng] [2024-12-17 01:25:21,589] [pool-1-thread-8] Initializing /data/darwinjob/SESSION4_Image2.tif: [testng] [2024-12-17 01:25:31,523] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z000.tif: [testng] [2024-12-17 01:25:47,376] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z002.tif: [testng] [2024-12-17 01:27:01,522] [pool-1-thread-12] Initializing /data/josiah/cell-Z21.C0.tiff: [testng] [2024-12-17 01:28:04,161] [pool-1-thread-10] Initializing /data/ascb/CYT-49_FriendSecretoryPair_4800.tif: [testng] [2024-12-17 01:28:19,320] [pool-1-thread-2] Initializing /data/lee/r03c03f01p01rc2-ch1sk1fk1fl1.tiff: [testng] [2024-12-17 01:28:31,331] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z060.tif: [testng] [2024-12-17 01:28:41,344] [pool-1-thread-4] Initializing /data/brian/insight.tiff: [testng] [2024-12-17 01:29:00,137] [pool-1-thread-9] Initializing /data/public/libtiff/quad-jpeg.tif: [testng] [2024-12-17 01:29:16,923] [pool-1-thread-3] Initializing /data/public/condensation/C4.pattern.tif: [testng] [2024-12-17 01:29:40,326] [pool-1-thread-7] Initializing /data/damian/21m.tiff: [testng] [2024-12-17 01:30:03,282] [pool-1-thread-8] Initializing /data/ascb/CYT-2_BaintonBoylesPhagocytosisYeastB_4800.tif: [testng] [2024-12-17 01:30:19,358] [pool-1-thread-1] 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[2024-12-17 03:15:35,466] [pool-1-thread-7] Initializing /data/josiah/cell-Z27.C0.tiff: [testng] [2024-12-17 03:15:40,480] [pool-1-thread-11] Initializing /data/misc/mri-new.mov: [testng] [2024-12-17 03:15:50,967] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z027.tif: [testng] [2024-12-17 03:15:56,697] [pool-1-thread-9] Initializing /data/josh/NESb_C2_TP8.tiff: [testng] [2024-12-17 03:16:02,380] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C0_Z019.tif: [testng] [2024-12-17 03:16:06,205] [pool-1-thread-8] Initializing /data/carolyn/tumor_1.tif: [testng] [2024-12-17 03:16:10,678] [pool-1-thread-5] Initializing /data/christine/Image5D_4color test stack/test stack.tif: [testng] [2024-12-17 03:16:19,749] [pool-1-thread-4] Initializing /data/john/C100915-MA_AXIS_LEH_IMAGE_KIND_FLAT_ICE_3.tif: [testng] [2024-12-17 03:16:23,510] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z041.tif: [testng] [2024-12-17 03:16:28,058] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x32.tiff: [testng] [2024-12-17 03:16:32,166] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0234.TIF: [testng] [2024-12-17 03:16:35,768] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C0_Z021.tif: [testng] [2024-12-17 03:16:39,701] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0254.TIF: [testng] [2024-12-17 03:16:45,507] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z030.tif: [testng] [2024-12-17 03:16:57,447] [pool-1-thread-1] Initializing /data/josiah/cell-Z34.C0.tiff: [testng] [2024-12-17 03:17:00,686] [pool-1-thread-8] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs005.TIF: [testng] [2024-12-17 03:17:04,133] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z040.tif: [testng] [2024-12-17 03:17:09,566] [pool-1-thread-10] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs009.TIF: [testng] [2024-12-17 03:17:15,342] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x64.tiff: [testng] [2024-12-17 03:17:18,546] [pool-1-thread-3] Initializing /data/josiah/cell-Z10.C1.tiff: [testng] [2024-12-17 03:17:23,287] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z027.tif: [testng] [2024-12-17 03:17:28,397] [pool-1-thread-7] Initializing /data/josiah/cell-Z11.C0.tiff: [testng] [2024-12-17 03:17:31,503] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z050.tif: [testng] [2024-12-17 03:17:34,793] [pool-1-thread-4] Initializing /data/paul-van-schayck/myfile.tif: [testng] [2024-12-17 03:17:38,428] [pool-1-thread-11] Initializing /data/public/libtiff/jim___ah.tif: [testng] [2024-12-17 03:17:53,640] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z014.tif: [testng] [2024-12-17 03:17:57,665] [pool-1-thread-5] Initializing /data/public/libtiff/strike.tif: [testng] [2024-12-17 03:18:02,438] [pool-1-thread-1] Initializing /data/ascb/CYT-44_HowellAcinarLabeled_4800.tif: [testng] [2024-12-17 03:18:06,744] [pool-1-thread-8] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x32.tiff: [testng] [2024-12-17 03:18:09,876] [pool-1-thread-10] Initializing /data/brian/Ch1_fld1.tif: [testng] [2024-12-17 03:18:14,240] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z063.tif: [testng] [2024-12-17 03:18:18,275] [pool-1-thread-6] Initializing /data/samples/melissa/strike-uncompressed.tiff: [testng] [2024-12-17 03:18:21,325] [pool-1-thread-12] Initializing /data/ascb/CYT-29_BaintonGlycogenAB_4800.tif: [testng] [2024-12-17 03:18:25,122] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z012.tif: [testng] [2024-12-17 03:18:28,118] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z061.tif: [testng] [2024-12-17 03:18:40,399] [pool-1-thread-11] Initializing /data/josiah/cell-Z38.C1.tiff: [testng] [2024-12-17 03:18:50,881] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x16.tiff: [testng] [2024-12-17 03:18:56,915] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x16.tiff: [testng] [2024-12-17 03:19:08,493] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0231.TIF: [testng] [2024-12-17 03:19:18,875] [pool-1-thread-8] Initializing /data/carolyn/tumor_3.tif: [testng] [2024-12-17 03:19:22,695] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0255.TIF: [testng] [2024-12-17 03:19:27,051] [pool-1-thread-7] Initializing /data/ascb/FND-26a_PaladeGlycogenLabeled_4800.tif: [testng] [2024-12-17 03:19:32,734] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z001.tif: [testng] [2024-12-17 03:19:36,437] [pool-1-thread-3] Initializing /data/josiah/cell-Z20.C0.tiff: [testng] [2024-12-17 03:19:39,754] [pool-1-thread-1] Initializing /data/samples/cielab/SKI_TC803_rel.tif: [testng] [2024-12-17 03:19:43,004] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z021.tif: [testng] [2024-12-17 03:19:57,993] [pool-1-thread-11] Initializing /data/public/condensation/C4.pattern6.tif: [testng] [2024-12-17 03:20:01,745] [pool-1-thread-2] Initializing /data/damian/24m.tiff: [testng] [2024-12-17 03:20:06,276] [pool-1-thread-10] Initializing /data/ascb/FND-12_PorterFranziniSarcoplasmic_4800.tif: [testng] [2024-12-17 03:20:12,607] [pool-1-thread-9] Initializing /data/damian/30m.tiff: [testng] [2024-12-17 03:20:18,244] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0239.TIF: [testng] [2024-12-17 03:20:23,357] [pool-1-thread-6] Initializing /data/samples/melissa/imagej-4gb/4gb-test&sizeX=1024&sizeY=1024&pixelType=uint16&sizeC=2050.fake: [testng] [2024-12-17 03:20:26,894] [pool-1-thread-4] Initializing /data/josiah/cell-Z32.C0.tiff: [testng] [2024-12-17 03:20:33,085] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z023.tif: [testng] [2024-12-17 03:20:38,996] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z061.tif: [testng] [2024-12-17 03:20:44,630] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0241.TIF: [testng] [2024-12-17 03:20:51,900] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C1_Z033.tif: [testng] [2024-12-17 03:21:00,433] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z046.tif: [testng] [2024-12-17 03:21:19,281] [pool-1-thread-2] Initializing /data/qa-4017/Artificial_xyt_8bit.tif: [testng] [2024-12-17 03:21:23,865] [pool-1-thread-11] Initializing /data/public/condensation/C4.pattern9.tif: [testng] 03:21:58,682 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:21:58,682 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:21:58,682 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-17_03-21-58.log] [testng] 03:21:58,683 |-INFO in ch.qos.logback.core.sift.SiftProcessor@679c6363 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38266, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 178 minutes 12 seconds Finished: SUCCESS