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Started by upstream project "BIOFORMATS-test-repo" build number 34 originally caused by: Started by upstream project "Trigger" build number 38 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4 [BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins12317936814349816019.sh + '[' svs = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_4647_merge_ci -v /uod/idr/repos/curated/svs:/data -v /uod/idr-scratch/merge-ci/curated/svs:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:55:39,117 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:55:39,120 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 01:55:39,120 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:55:39,121 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:55:39,121 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:55:39,122 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:55:39,122 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:55:39,122 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:55:39,123 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:55:39,123 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:55:39,123 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:55:39,123 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:55:39,406 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:55:39,406 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:55:39,435 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:55:39,435 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:55:39,444 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:55:39,444 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:55:39,444 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:55:39,444 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:55:39,444 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 01:55:39,445 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 01:55:39,445 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 322 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-04-15 01:55:39,455] [main] java.version = 1.8.0_342 [testng] 01:55:39,459 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:55:39,459 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:55:39,507 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-15_01-55-39.log] [testng] 01:55:39,508 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-04-15 01:55:39,510] [main] testng.directory = /data [testng] [2024-04-15 01:55:39,510] [main] testng.configDirectory = /config [testng] [2024-04-15 01:55:39,524] [main] testng.multiplier = 1.0 [testng] [2024-04-15 01:55:39,524] [main] testng.in-memory = false [testng] [2024-04-15 01:55:39,524] [main] testng.allow-missing = false [testng] [2024-04-15 01:55:39,524] [main] user.language = fr [testng] [2024-04-15 01:55:39,525] [main] user.country = FR [testng] [2024-04-15 01:55:39,525] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-04-15 01:55:41,616] [main] ---------------------------------------- [testng] [2024-04-15 01:55:41,616] [main] Total files: 119 [testng] [2024-04-15 01:55:41,616] [main] Scan time: 2.091 s (17 ms/file) [testng] [2024-04-15 01:55:41,616] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 110 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-04-15 01:55:56,403] [pool-1-thread-1] Initializing /data/helmut/Comp_jpeg2000.svs: [testng] 01:55:56,404 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:55:56,404 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:55:56,405 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-15_01-55-56.log] [testng] 01:55:56,406 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4ab9b18d - End of configuration. [testng] [2024-04-15 01:55:56,455] [pool-1-thread-12] Initializing /data/samples/Mammal Eye_001.svs: [testng] 01:55:56,455 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:55:56,455 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:55:56,456 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-15_01-55-56.log] [testng] 01:55:56,457 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e474da9 - End of configuration. [testng] [2024-04-15 01:55:56,502] [pool-1-thread-11] Initializing /data/david/2316.svs: [testng] 01:55:56,503 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:55:56,503 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:55:56,504 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-15_01-55-56.log] [testng] 01:55:56,504 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7a630938 - End of configuration. [testng] [2024-04-15 01:55:56,608] [pool-1-thread-10] Initializing /data/converted/z-stack/PHAS 01.svs: [testng] 01:55:56,609 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:55:56,609 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:55:56,610 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-15_01-55-56.log] [testng] 01:55:56,610 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4032a218 - End of configuration. [testng] [2024-04-15 01:55:56,731] [pool-1-thread-9] Initializing /data/toby/test01_singleCore_YCC.svs: [testng] 01:55:56,731 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:55:56,731 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:55:56,733 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-15_01-55-56.log] [testng] 01:55:56,750 |-INFO in ch.qos.logback.core.sift.SiftProcessor@666fb269 - End of configuration. [testng] [2024-04-15 01:55:56,789] [pool-1-thread-8] Initializing /data/toby/test01_singleCore_cws/Ss38.jpg: [testng] 01:55:56,790 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:55:56,790 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:55:56,790 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-15_01-55-56.log] [testng] 01:55:56,791 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6cabbba - End of configuration. [testng] [2024-04-15 01:55:56,820] [pool-1-thread-7] Initializing /data/jason/ColCan slide 1.svs: [testng] 01:55:56,820 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:55:56,820 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:55:56,821 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-15_01-55-56.log] [testng] 01:55:56,822 |-INFO in ch.qos.logback.core.sift.SiftProcessor@789078fd - End of configuration. [testng] [2024-04-15 01:55:57,052] [pool-1-thread-6] Initializing /data/samples/sanitized/CMU-1-Small-Region.svs: [testng] 01:55:57,052 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:55:57,052 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:55:57,053 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-15_01-55-57.log] [testng] 01:55:57,054 |-INFO in ch.qos.logback.core.sift.SiftProcessor@62c271fe - End of configuration. [testng] [2024-04-15 01:55:57,363] [pool-1-thread-5] Initializing /data/alexandra/UMD019_Tri.svs: [testng] 01:55:57,364 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:55:57,364 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:55:57,365 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-15_01-55-57.log] [testng] 01:55:57,365 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2a0d961 - End of configuration. [testng] [2024-04-15 01:55:57,437] [pool-1-thread-4] Initializing /data/toby/test01_singleCore_cws/Ss42.jpg: [testng] 01:55:57,438 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:55:57,438 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:55:57,439 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-15_01-55-57.log] [testng] 01:55:57,440 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6c2a6cc1 - End of configuration. [testng] [2024-04-15 01:55:57,449] [pool-1-thread-3] Initializing /data/toby/test01_singleCore_cws/Ss6.jpg: [testng] 01:55:57,450 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:55:57,450 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:55:57,450 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-15_01-55-57.log] [testng] 01:55:57,451 |-INFO in ch.qos.logback.core.sift.SiftProcessor@710b9344 - End of configuration. [testng] [2024-04-15 01:55:57,460] [pool-1-thread-2] Initializing /data/public/77917.svs: [testng] 01:55:57,461 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:55:57,461 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:55:57,462 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-15_01-55-57.log] [testng] 01:55:57,462 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2fa59366 - End of configuration. [testng] [2024-04-15 01:55:59,318] [pool-1-thread-3] Initializing /data/toby/test01_singleCore_cws/Ss49.jpg: [testng] [2024-04-15 01:55:59,328] [pool-1-thread-4] Initializing /data/toby/9_0_22_test01.svs: [testng] [2024-04-15 01:55:59,401] [pool-1-thread-8] Initializing /data/toby/test01_singleCore_cws/Ss59.jpg: [testng] [2024-04-15 01:55:59,593] [pool-1-thread-8] Initializing /data/toby/test01_singleCore_cws/SlideMacro.jpg: [testng] [2024-04-15 01:55:59,951] [pool-1-thread-3] Initializing /data/toby/test01_singleCore_cws/Ss20.jpg: [testng] [2024-04-15 01:56:00,967] [pool-1-thread-3] Initializing /data/toby/test01_singleCore_cws/Ss57.jpg: [testng] [2024-04-15 01:56:00,974] [pool-1-thread-8] Initializing /data/david-smith/CMU-1.svs: [testng] [2024-04-15 01:56:01,248] [pool-1-thread-3] Initializing /data/toby/test01_singleCore_cws/Ss35.jpg: [testng] [2024-04-15 01:56:01,795] [pool-1-thread-3] Initializing /data/toby/test01_singleCore_cws/Ss48.jpg: [testng] [2024-04-15 01:56:02,046] [pool-1-thread-3] Initializing /data/toby/test01_singleCore_cws/Ss56.jpg: [testng] [2024-04-15 01:56:02,249] [pool-1-thread-3] Initializing /data/paul/83797.svs: [testng] [2024-04-15 01:56:03,114] [pool-1-thread-6] Initializing /data/public/77928.svs: [testng] [2024-04-15 01:56:10,290] [pool-1-thread-9] Initializing /data/toby/test01_singleCore_cws/Ss44.jpg: [testng] [2024-04-15 01:56:10,966] [pool-1-thread-9] Initializing /data/harvey/93888.svs: [testng] [2024-04-15 01:56:25,577] [pool-1-thread-8] Initializing /data/toby/test01_singleCore_cws/Ss24.jpg: [testng] [2024-04-15 01:56:25,757] [pool-1-thread-8] Initializing /data/toby/test01_singleCore_cws/Ss25.jpg: [testng] [2024-04-15 01:56:26,345] [pool-1-thread-8] Initializing /data/toby/test01_singleCore_cws/Ss19.jpg: [testng] [2024-04-15 01:56:26,659] [pool-1-thread-8] Initializing /data/toby/test01_singleCore_TIFFLZW.tif: [testng] [2024-04-15 01:56:28,096] [pool-1-thread-12] Initializing /data/toby/test01_singleCore_cws/Ss41.jpg: [testng] [2024-04-15 01:56:28,161] [pool-1-thread-3] Initializing /data/jason/50114.svs: [testng] [2024-04-15 01:56:28,906] [pool-1-thread-12] Initializing /data/toby/test01_singleCore_jpg2000.svs: [testng] [2024-04-15 01:56:36,929] [pool-1-thread-6] Initializing /data/alexandra/UMD009_HE.svs: [testng] [2024-04-15 01:56:40,168] [pool-1-thread-8] Initializing /data/options/remove_thumbnail_single_image/CMU-1.svs: [testng] [2024-04-15 01:56:41,010] [pool-1-thread-2] Initializing /data/toby/test01_singleCore_cws/Ss36.jpg: [testng] [2024-04-15 01:56:41,256] [pool-1-thread-2] Initializing /data/toby/test01_singleCore_cws/Ss37.jpg: [testng] [2024-04-15 01:56:41,376] [pool-1-thread-11] Initializing /data/toby/test01_singleCore_cws/PreviewSlide.jpg: [testng] [2024-04-15 01:56:41,393] [pool-1-thread-9] Initializing /data/yan/2003-05-P8072-VVL2-stripe & stich.svs: [testng] [2024-04-15 01:56:42,068] [pool-1-thread-2] Initializing /data/toby/test01_singleCore_cws/Ss54.jpg: [testng] [2024-04-15 01:56:42,242] [pool-1-thread-2] Initializing /data/toby/test01_singleCore_cws/Ss46.jpg: [testng] [2024-04-15 01:56:42,294] [pool-1-thread-11] Initializing /data/jeff/5794_001.svs: [testng] [2024-04-15 01:56:42,606] [pool-1-thread-2] Initializing /data/david/2310_a.svs: [testng] [2024-04-15 01:56:45,002] [pool-1-thread-11] Initializing /data/helmut/Aperio_jpg2000_33003.svs: [testng] [2024-04-15 01:56:45,192] [pool-1-thread-1] Initializing /data/toby/test01_singleCore_cws/Ss9.jpg: [testng] [2024-04-15 01:56:45,672] [pool-1-thread-1] Initializing /data/toby/test01_singleCore_cws/Ss10.jpg: [testng] [2024-04-15 01:56:45,812] [pool-1-thread-5] Initializing /data/toby/test01_singleCore_jpg.svs: [testng] [2024-04-15 01:56:46,203] [pool-1-thread-1] Initializing /data/alexandra/UMD001_ORO.svs: [testng] [2024-04-15 01:56:49,676] [pool-1-thread-7] Initializing /data/toby/test01_singleCore_cws/SlideLabel.jpg: [testng] [2024-04-15 01:56:49,907] [pool-1-thread-7] Initializing /data/toby/test01_singleCore_cws/Ss4.jpg: [testng] [2024-04-15 01:56:50,767] [pool-1-thread-7] Initializing /data/toby/test01_singleCore_cws/Ss39.jpg: [testng] [2024-04-15 01:56:51,081] [pool-1-thread-7] Initializing /data/toby/test01_singleCore_cws/Ss13.jpg: [testng] [2024-04-15 01:56:51,479] [pool-1-thread-7] Initializing /data/yan/082_flr.svs: [testng] [2024-04-15 01:56:52,563] [pool-1-thread-3] Initializing /data/toby/test01_singleCore_cws/Ss58.jpg: [testng] [2024-04-15 01:56:52,848] [pool-1-thread-3] Initializing /data/imagesc-61404/1001.svs: [testng] [2024-04-15 01:56:53,682] [pool-1-thread-12] Initializing /data/karen/257_a.svs: [testng] [2024-04-15 01:56:55,417] [pool-1-thread-11] Initializing /data/toby/test01_singleCore_cws/Ss12.jpg: [testng] [2024-04-15 01:56:55,501] [pool-1-thread-4] Initializing /data/toby/test01_singleCore_cws/Ss47.jpg: [testng] [2024-04-15 01:56:55,648] [pool-1-thread-11] Initializing /data/toby/test01_singleCore_cws/Ss32.jpg: [testng] [2024-04-15 01:56:55,881] [pool-1-thread-4] Initializing /data/toby/test01_singleCore_cws/Ss51.jpg: [testng] [2024-04-15 01:56:56,077] [pool-1-thread-11] Initializing /data/toby/test01_singleCore_cws/Ss52.jpg: [testng] [2024-04-15 01:56:57,730] [pool-1-thread-4] Initializing /data/toby/test01_singleCore_cws/Ss53.jpg: [testng] [2024-04-15 01:56:57,960] [pool-1-thread-11] Initializing /data/toby/test01_singleCore_cws/Ss45.jpg: [testng] [2024-04-15 01:56:58,027] [pool-1-thread-5] Initializing /data/toby/test01_singleCore_cws/Ss28.jpg: [testng] [2024-04-15 01:56:58,088] [pool-1-thread-4] Initializing /data/bolek/6jp2.svs: [testng] [2024-04-15 01:56:58,343] [pool-1-thread-11] Initializing /data/toby/test01_singleCore_cws/Ss55.jpg: [testng] [2024-04-15 01:56:58,409] [pool-1-thread-5] Initializing /data/toby/test01_singleCore_cws/Ss7.jpg: [testng] [2024-04-15 01:56:58,469] [pool-1-thread-11] Initializing /data/toby/test01_singleCore_cws/Ss30.jpg: [testng] [2024-04-15 01:56:59,006] [pool-1-thread-11] Initializing /data/toby/test01_singleCore_cws/Ss8.jpg: [testng] [2024-04-15 01:56:59,172] [pool-1-thread-5] Initializing /data/toby/test01_singleCore_cws/Ss14.jpg: [testng] [2024-04-15 01:56:59,775] [pool-1-thread-11] Initializing /data/toby/test01_large_jpg2000.svs: [testng] [2024-04-15 01:56:59,820] [pool-1-thread-5] Initializing /data/toby/test01_singleCore_cws/Ss29.jpg: [testng] [2024-04-15 01:57:00,119] [pool-1-thread-5] Initializing /data/toby/test01_singleCore_cws/Ss3.jpg: [testng] [2024-04-15 01:57:00,907] [pool-1-thread-5] Initializing /data/toby/test01_singleCore_cws/Ss34.jpg: [testng] [2024-04-15 01:57:01,208] [pool-1-thread-5] Initializing /data/julien/crop_problem.svs: [testng] [2024-04-15 01:57:05,806] [pool-1-thread-1] Initializing /data/yan/16722_001.svs: [testng] [2024-04-15 01:57:08,923] [pool-1-thread-8] Initializing /data/qa-17150/450CD3_2016-04-12.tif: [testng] [2024-04-15 01:57:10,599] [pool-1-thread-5] Initializing /data/toby/test01_singleCore_cws/Ss18.jpg: [testng] [2024-04-15 01:57:10,732] [pool-1-thread-10] Initializing /data/paul/83802.svs: [testng] [2024-04-15 01:57:10,857] [pool-1-thread-5] Initializing /data/toby/test01_singleCore_cws/Ss43.jpg: [testng] [2024-04-15 01:57:11,224] [pool-1-thread-5] Initializing /data/toby/test01_singleCore_cws/Ss40.jpg: [testng] [2024-04-15 01:57:12,382] [pool-1-thread-5] Initializing /data/gh-3757/01ae6c82-106d-4854-8209-068998340113/TCGA-OR-A5K9-01Z-00-DX2.7C0DDEF6-8CCC-4640-820F-7703616E2FEF.svs: [testng] [2024-04-15 01:57:12,951] [pool-1-thread-1] Initializing /data/toby/test01_singleCore_cws/Ss31.jpg: [testng] [2024-04-15 01:57:13,080] [pool-1-thread-3] Initializing /data/toby/test01_singleCore_cws/Ss16.jpg: [testng] [2024-04-15 01:57:13,563] [pool-1-thread-1] Initializing /data/toby/test01_singleCore_cws/Ss15.jpg: [testng] [2024-04-15 01:57:13,623] [pool-1-thread-3] Initializing /data/toby/test01_singleCore_cws/Ss17.jpg: [testng] [2024-04-15 01:57:13,881] [pool-1-thread-1] Initializing /data/toby/test01_singleCore_cws/Ss23.jpg: [testng] [2024-04-15 01:57:14,079] [pool-1-thread-3] Initializing /data/toby/test01_singleCore_cws/Ss11.jpg: [testng] [2024-04-15 01:57:14,348] [pool-1-thread-1] Initializing /data/toby/test01_singleCore_cws/Ss5.jpg: [testng] [2024-04-15 01:57:14,513] [pool-1-thread-2] Initializing /data/jason/77886.svs: [testng] [2024-04-15 01:57:14,722] [pool-1-thread-3] Initializing /data/julien/image_jpeg2000.svs: [testng] [2024-04-15 01:57:14,819] [pool-1-thread-1] Initializing /data/options/remove_thumbnail/CMU-1.svs: [testng] [2024-04-15 01:57:16,286] [pool-1-thread-6] Initializing /data/toby/test01_singleCore_cws/Ss22.jpg: [testng] [2024-04-15 01:57:17,089] [pool-1-thread-6] Initializing /data/toby/test01_singleCore_cws/Ss60.jpg: [testng] [2024-04-15 01:57:17,227] [pool-1-thread-6] Initializing /data/toby/9_0_22_test02.svs: [testng] [2024-04-15 01:57:18,627] [pool-1-thread-12] Initializing /data/gh-3757/65141.svs: [testng] [2024-04-15 01:57:18,730] [pool-1-thread-3] Initializing /data/karen/261.svs: [testng] [2024-04-15 01:57:25,330] [pool-1-thread-10] Initializing /data/samples/sanitized/CMU-1.svs: [testng] [2024-04-15 01:57:26,290] [pool-1-thread-8] Initializing /data/toby/test01_singleCore_cws/Ss1.jpg: [testng] [2024-04-15 01:57:26,711] [pool-1-thread-8] Initializing /data/jason/77892.svs: [testng] [2024-04-15 01:57:28,786] [pool-1-thread-5] Initializing /data/toby/test01_singleCore_cws/Ss50.jpg: [testng] [2024-04-15 01:57:29,064] [pool-1-thread-5] Initializing /data/toby/test01_singleCore_cws/Ss2.jpg: [testng] [2024-04-15 01:57:29,530] [pool-1-thread-5] Initializing /data/toby/test01_singleCore_cws/Ss26.jpg: [testng] [2024-04-15 01:57:29,901] [pool-1-thread-5] Initializing /data/toby/test01_singleCore_cws/Ss33.jpg: [testng] [2024-04-15 01:57:30,794] [pool-1-thread-5] Initializing /data/toby/test01_singleCore_cws/Ss27.jpg: [testng] [2024-04-15 01:57:31,309] [pool-1-thread-6] Initializing /data/toby/test01_singleCore_cws/Ss21.jpg: [testng] [2024-04-15 01:57:31,332] [pool-1-thread-5] Initializing /data/david-smith/02.svs: [testng] [2024-04-15 01:57:31,478] [pool-1-thread-1] Initializing /data/samples/BreastCancer.svs: [testng] [2024-04-15 01:57:32,299] [pool-1-thread-6] Initializing /data/toby/test01_singleCore_TIFF.tif: [testng] [2024-04-15 01:57:32,450] [pool-1-thread-7] Initializing /data/toby/test01_singleCore_jpg.jpg: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5830, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 3 minutes 10 seconds Finished: SUCCESS