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Started by upstream project "BIOFORMATS-test-repo" build number 294 originally caused by: Started by upstream project "Trigger" build number 313 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins4065508076067595978.sh + '[' ome-xml = slidebook ']' ++ date +%u + '[' 3 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_46543_merge_ci -v /uod/idr/repos/curated/ome-xml:/data -v /uod/idr-scratch/merge-ci/curated/ome-xml:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 12:49:39,527 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 12:49:39,528 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service. [testng] 12:49:39,528 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 12:49:39,529 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 12:49:39,529 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 12:49:39,530 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 12:49:39,530 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 12:49:39,530 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 12:49:39,531 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 12:49:39,531 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 12:49:39,531 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 12:49:39,532 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 12:49:39,695 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 12:49:39,696 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 12:49:39,718 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 12:49:39,718 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 12:49:39,724 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 12:49:39,724 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 12:49:39,724 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 12:49:39,724 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 12:49:39,724 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration. [testng] 12:49:39,725 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point [testng] 12:49:39,725 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 195 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-18 12:49:39,734] [main] java.version = 17.0.2 [testng] 12:49:39,737 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 12:49:39,737 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:49:39,779 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-18_12-49-39.log] [testng] 12:49:39,781 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration. [testng] [2024-12-18 12:49:39,783] [main] testng.directory = /data [testng] [2024-12-18 12:49:39,783] [main] testng.configDirectory = /config [testng] [2024-12-18 12:49:39,792] [main] testng.multiplier = 1.0 [testng] [2024-12-18 12:49:39,793] [main] testng.in-memory = false [testng] [2024-12-18 12:49:39,793] [main] testng.allow-missing = false [testng] [2024-12-18 12:49:39,793] [main] user.language = en [testng] [2024-12-18 12:49:39,793] [main] user.country = ${user.country} [testng] [2024-12-18 12:49:39,793] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-12-18 12:50:00,573] [main] ---------------------------------------- [testng] [2024-12-18 12:50:00,573] [main] Total files: 203 [testng] [2024-12-18 12:50:00,573] [main] Scan time: 20.78 s (102 ms/file) [testng] [2024-12-18 12:50:00,573] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 202 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-18 12:55:44,028] [pool-1-thread-1] Initializing /data/public/2011-06/spim.ome.xml: [testng] 12:55:44,028 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 12:55:44,029 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:55:44,030 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-18_12-55-44.log] [testng] 12:55:44,030 |-INFO in ch.qos.logback.core.sift.SiftProcessor@67a9d13c - End of configuration. [testng] [2024-12-18 12:55:45,457] [pool-1-thread-12] Initializing /data/public/2011-06/multi-channel.ome.xml: [testng] 12:55:45,457 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 12:55:45,457 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:55:45,458 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-18_12-55-45.log] [testng] 12:55:45,458 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3214c97f - End of configuration. [testng] [2024-12-18 12:55:46,680] [pool-1-thread-11] Initializing /data/johannes/20100625_W3_Ppac_8.ome: [testng] 12:55:46,680 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 12:55:46,680 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:55:46,681 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-18_12-55-46.log] [testng] 12:55:46,681 |-INFO in ch.qos.logback.core.sift.SiftProcessor@73915b07 - End of configuration. [testng] [2024-12-18 12:55:48,240] [pool-1-thread-10] Initializing /data/public/2016-06/single-image.ome.xml: [testng] 12:55:48,240 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 12:55:48,240 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:55:48,240 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-18_12-55-48.log] [testng] 12:55:48,241 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3627bfb8 - End of configuration. [testng] [2024-12-18 12:55:49,540] [pool-1-thread-9] Initializing /data/samples/Sample-2003-custom-ST.ome: [testng] 12:55:49,540 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 12:55:49,540 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:55:49,541 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-18_12-55-49.log] [testng] 12:55:49,541 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ca97483 - End of configuration. [testng] [2024-12-18 12:55:50,731] [pool-1-thread-8] Initializing /data/public/2010-04/instrument.ome.xml: [testng] 12:55:50,731 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 12:55:50,731 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:55:50,732 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-18_12-55-50.log] [testng] 12:55:50,732 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f6fea82 - End of configuration. [testng] [2024-12-18 12:55:51,778] [pool-1-thread-7] Initializing /data/public/2015-01/multi-channel-z-series.ome.xml: [testng] 12:55:51,778 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 12:55:51,779 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:55:51,779 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-18_12-55-51.log] [testng] 12:55:51,779 |-INFO in ch.qos.logback.core.sift.SiftProcessor@640272ee - End of configuration. [testng] [2024-12-18 12:55:52,851] [pool-1-thread-6] Initializing /data/public/2012-06/no-date.ome.xml: [testng] 12:55:52,851 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 12:55:52,851 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:55:52,852 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-18_12-55-52.log] [testng] 12:55:52,852 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1e9de44 - End of configuration. [testng] [2024-12-18 12:55:54,424] [pool-1-thread-5] Initializing /data/public/2008-09/instrument.ome.xml: [testng] 12:55:54,424 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 12:55:54,424 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:55:54,425 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-18_12-55-54.log] [testng] 12:55:54,425 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5ea32782 - End of configuration. [testng] [2024-12-18 12:55:55,766] [pool-1-thread-4] Initializing /data/public/2016-06/instrument-units-alternate.ome.xml: [testng] 12:55:55,766 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 12:55:55,767 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:55:55,767 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-18_12-55-55.log] [testng] 12:55:55,767 |-INFO in ch.qos.logback.core.sift.SiftProcessor@cda37d - End of configuration. [testng] [2024-12-18 12:55:57,033] [pool-1-thread-3] Initializing /data/public/2012-06/transformations-downgrade.ome.xml: [testng] 12:55:57,033 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 12:55:57,033 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:55:57,034 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-18_12-55-57.log] [testng] 12:55:57,034 |-INFO in ch.qos.logback.core.sift.SiftProcessor@65f3b57 - End of configuration. [testng] [2024-12-18 12:55:58,042] [pool-1-thread-2] Initializing /data/public/2015-01/instrument-units-default.ome.xml: [testng] 12:55:58,042 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 12:55:58,042 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:55:58,042 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-18_12-55-58.log] [testng] 12:55:58,043 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b5d0536 - End of configuration. [testng] [2024-12-18 12:56:16,314] [pool-1-thread-6] Initializing /data/public/2015-01/multi-channel-z-series-time-series.ome.xml: [testng] [2024-12-18 12:56:17,782] [pool-1-thread-10] Initializing /data/public/2016-06/timestampannotation.ome.xml: [testng] [2024-12-18 12:56:19,200] [pool-1-thread-12] Initializing /data/public/2016-06/folders-larger-taxonomy.ome.xml: [testng] [2024-12-18 12:56:20,607] [pool-1-thread-4] Initializing /data/public/2016-06/transformations-upgrade.ome.xml: [testng] [2024-12-18 12:56:21,578] [pool-1-thread-7] Initializing /data/public/2013-06/xmlannotation-body-space.ome.xml: [testng] [2024-12-18 12:56:23,053] [pool-1-thread-5] Initializing /data/public/2011-06/filter.ome.xml: [testng] [2024-12-18 12:56:24,588] [pool-1-thread-2] Initializing /data/public/2015-01/xmlannotation-multi-value.ome.xml: [testng] [2024-12-18 12:56:25,615] [pool-1-thread-8] Initializing /data/public/2012-06/z-series.ome.xml: [testng] [2024-12-18 12:56:26,836] [pool-1-thread-3] Initializing /data/public/2010-06/multi-channel-time-series.ome.xml: [testng] [2024-12-18 12:56:27,903] [pool-1-thread-11] Initializing /data/public/2016-06/xmlannotation-svg.ome.xml: [testng] [2024-12-18 12:56:29,131] [pool-1-thread-9] Initializing /data/public/2015-01/instrument-units-alternate.ome.xml: [testng] [2024-12-18 12:56:30,770] [pool-1-thread-1] Initializing /data/public/2010-06/time-series.ome.xml: [testng] [2024-12-18 12:56:45,534] [pool-1-thread-8] Initializing /data/public/2010-04/filter.ome.xml: [testng] [2024-12-18 12:56:47,028] [pool-1-thread-5] Initializing /data/public/2009-09/instrument.ome.xml: [testng] [2024-12-18 12:56:48,483] [pool-1-thread-1] Initializing /data/public/2009-09/single-image.ome.xml: [testng] [2024-12-18 12:56:49,853] [pool-1-thread-3] Initializing /data/public/2008-09/single-image.ome.xml: [testng] [2024-12-18 12:56:51,164] [pool-1-thread-9] Initializing /data/samples/test.OME: [testng] [2024-12-18 12:56:53,229] [pool-1-thread-2] Initializing /data/public/2011-06/multi-channel-z-series-time-series.ome.xml: [testng] [2024-12-18 12:56:54,495] [pool-1-thread-7] Initializing /data/public/2011-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-12-18 12:56:55,716] [pool-1-thread-11] Initializing /data/public/2011-06/xmlannotation-svg.ome.xml: [testng] [2024-12-18 12:56:57,071] [pool-1-thread-4] Initializing /data/public/2011-06/single-image.ome.xml: [testng] [2024-12-18 12:56:59,159] [pool-1-thread-10] Initializing /data/public/2015-01/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-12-18 12:57:00,430] [pool-1-thread-12] Initializing /data/public/2011-06/time-series.ome.xml: [testng] [2024-12-18 12:57:01,670] [pool-1-thread-6] Initializing /data/public/2010-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-12-18 12:57:11,423] [pool-1-thread-9] Initializing /data/public/2013-06/ROI.ome.xml: [testng] [2024-12-18 12:57:12,431] [pool-1-thread-1] Initializing /data/public/2012-06/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-12-18 12:57:13,344] [pool-1-thread-10] Initializing /data/public/2016-06/z-series-time-series.ome.xml: [testng] [2024-12-18 12:57:14,186] [pool-1-thread-4] Initializing /data/public/2010-04/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-12-18 12:57:15,158] [pool-1-thread-3] Initializing /data/public/2011-06/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-12-18 12:57:16,071] [pool-1-thread-12] Initializing /data/public/2011-06/multi-channel-z-series.ome.xml: [testng] [2024-12-18 12:57:16,997] [pool-1-thread-2] Initializing /data/public/2016-06/commentannotation.ome.xml: [testng] [2024-12-18 12:57:18,907] [pool-1-thread-11] Initializing /data/public/2012-06/xmlannotation-svg.ome.xml: [testng] [2024-12-18 12:57:21,147] [pool-1-thread-5] Initializing /data/public/2012-06/time-series.ome.xml: [testng] [2024-12-18 12:57:23,631] [pool-1-thread-8] Initializing /data/public/2009-09/multi-channel.ome.xml: [testng] [2024-12-18 12:57:26,544] [pool-1-thread-6] Initializing /data/mario/Hoechst_ND - n000000.tif: [testng] [2024-12-18 12:57:38,637] [pool-1-thread-7] Initializing /data/public/2015-01/commentannotation.ome.xml: [testng] [2024-12-18 12:57:55,371] [pool-1-thread-9] Initializing /data/public/2015-01/time-series.ome.xml: [testng] [2024-12-18 12:58:04,632] [pool-1-thread-2] Initializing /data/public/2010-06/multi-channel-z-series.ome.xml: [testng] [2024-12-18 12:58:06,218] [pool-1-thread-10] Initializing /data/mario/Hoechst_ND - n000000.ome: [testng] [2024-12-18 12:58:08,364] [pool-1-thread-11] Initializing /data/public/2010-04/single-image.ome.xml: [testng] [2024-12-18 12:58:11,011] [pool-1-thread-12] Initializing /data/public/2010-04/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-12-18 12:58:15,077] [pool-1-thread-5] Initializing /data/public/2009-09/multi-channel-time-series.ome.xml: [testng] [2024-12-18 12:58:18,210] [pool-1-thread-7] Initializing /data/public/2011-06/multi-channel-time-series.ome.xml: [testng] [2024-12-18 12:58:20,940] [pool-1-thread-8] Initializing /data/public/2011-06/no-date.ome.xml: [testng] [2024-12-18 12:58:22,586] [pool-1-thread-4] Initializing /data/public/2009-09/multi-channel-z-series.ome.xml: [testng] [2024-12-18 12:58:24,033] [pool-1-thread-1] Initializing /data/public/2008-09/multi-channel-z-series.ome.xml: [testng] [2024-12-18 12:58:25,019] [pool-1-thread-3] Initializing /data/public/2013-06/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-12-18 12:58:40,176] [pool-1-thread-9] Initializing /data/public/2016-06/transformations-downgrade.ome.xml: [testng] [2024-12-18 12:58:49,085] [pool-1-thread-7] Initializing /data/public/2013-06/instrument.ome.xml: [testng] [2024-12-18 12:58:51,036] [pool-1-thread-1] Initializing /data/sandeep/synth_rbc.ome: [testng] [2024-12-18 12:58:53,977] [pool-1-thread-5] Initializing /data/public/2011-06/ROI.ome.xml: [testng] [2024-12-18 12:58:55,655] [pool-1-thread-4] Initializing /data/public/2015-01/ROI.ome.xml: [testng] [2024-12-18 12:58:56,542] [pool-1-thread-2] Initializing /data/public/2012-06/spim.ome.xml: [testng] [2024-12-18 12:58:59,847] [pool-1-thread-11] Initializing /data/public/2016-06/multi-channel-z-series-time-series.ome.xml: [testng] [2024-12-18 12:59:01,592] [pool-1-thread-8] Initializing /data/public/2013-06/transformations-downgrade.ome.xml: [testng] [2024-12-18 12:59:03,097] [pool-1-thread-12] Initializing /data/public/2015-01/transformations-upgrade.ome.xml: [testng] [2024-12-18 12:59:05,373] [pool-1-thread-3] Initializing /data/curtis/black0.ome: [testng] [2024-12-18 12:59:07,346] [pool-1-thread-10] Initializing /data/public/2010-04/time-series.ome.xml: [testng] [2024-12-18 12:59:19,671] [pool-1-thread-6] Initializing /data/public/2015-01/tagannotation.ome.xml: [testng] [2024-12-18 12:59:24,965] [pool-1-thread-9] Initializing /data/public/2012-06/metadata-only.ome.xml: [testng] [2024-12-18 12:59:33,291] [pool-1-thread-4] Initializing /data/public/2016-06/tagannotation.ome.xml: [testng] [2024-12-18 12:59:35,616] [pool-1-thread-12] Initializing /data/public/2008-09/time-series.ome.xml: [testng] [2024-12-18 12:59:38,745] [pool-1-thread-8] Initializing /data/curtis/black6-7.ome: [testng] [2024-12-18 12:59:41,162] [pool-1-thread-11] Initializing /data/curtis/black0.tif: [testng] [2024-12-18 12:59:54,290] [pool-1-thread-5] Initializing /data/public/2010-06/single-image.ome.xml: [testng] [2024-12-18 12:59:56,409] [pool-1-thread-7] Initializing /data/public/2008-09/multi-pixel-default.ome.xml: [testng] [2024-12-18 12:59:59,600] [pool-1-thread-10] Initializing /data/public/2016-06/xmlannotation-multi-value.ome.xml: [testng] [2024-12-18 13:00:03,327] [pool-1-thread-2] Initializing /data/public/2010-06/xmlannotation-svg.ome.xml: [testng] [2024-12-18 13:00:06,506] [pool-1-thread-1] Initializing /data/samples/Sample-2008_02.ome: [testng] [2024-12-18 13:00:08,939] [pool-1-thread-3] Initializing /data/public/2009-09/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-12-18 13:00:21,217] [pool-1-thread-6] Initializing /data/public/2015-01/spim.ome.xml: [testng] [2024-12-18 13:00:32,562] [pool-1-thread-9] Initializing /data/public/2012-06/ROI.ome.xml: [testng] [2024-12-18 13:00:44,092] [pool-1-thread-4] Initializing /data/public/2013-06/xmlannotation-multi-value.ome.xml: [testng] [2024-12-18 13:00:49,436] [pool-1-thread-7] Initializing /data/public/2013-06/timestampannotation.ome.xml: [testng] [2024-12-18 13:00:53,685] [pool-1-thread-12] Initializing /data/public/2015-01/z-series-time-series.ome.xml: [testng] [2024-12-18 13:00:57,615] [pool-1-thread-2] Initializing /data/public/2013-06/single-image.ome.xml: [testng] [2024-12-18 13:00:59,786] [pool-1-thread-5] Initializing /data/public/2013-06/timestampannotation-posix-only.ome.xml: [testng] [2024-12-18 13:01:03,851] [pool-1-thread-10] Initializing /data/public/2016-06/folders-simple-taxonomy.ome.xml: [testng] [2024-12-18 13:01:09,017] [pool-1-thread-1] Initializing /data/public/2013-06/spim.ome.xml: [testng] [2024-12-18 13:01:14,416] [pool-1-thread-3] Initializing /data/public/2010-06/metadata-only.ome.xml: [testng] [2024-12-18 13:01:17,654] [pool-1-thread-8] Initializing /data/public/2016-06/spim.ome.xml: [testng] [2024-12-18 13:01:28,571] [pool-1-thread-6] Initializing /data/public/2013-06/multi-channel-z-series-time-series.ome.xml: [testng] [2024-12-18 13:01:40,482] [pool-1-thread-9] Initializing /data/public/2010-04/metadata-only.ome.xml: [testng] [2024-12-18 13:01:49,021] [pool-1-thread-2] Initializing /data/public/2013-06/xmlannotation-svg.ome.xml: [testng] [2024-12-18 13:01:52,262] [pool-1-thread-4] Initializing /data/public/2011-06/z-series.ome.xml: [testng] [2024-12-18 13:01:54,761] [pool-1-thread-3] Initializing /data/public/2013-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-12-18 13:01:58,199] [pool-1-thread-8] Initializing /data/curtis/all-black.ome: [testng] [2024-12-18 13:02:01,306] [pool-1-thread-1] Initializing /data/samples/TAABA.ome: [testng] [2024-12-18 13:02:04,584] [pool-1-thread-5] Initializing /data/public/2015-01/xmlannotation-svg.ome.xml: [testng] [2024-12-18 13:02:06,180] [pool-1-thread-7] Initializing /data/public/2010-06/spim.ome.xml: [testng] [2024-12-18 13:02:09,479] [pool-1-thread-10] Initializing /data/public/2010-04/z-series.ome.xml: [testng] [2024-12-18 13:02:14,003] [pool-1-thread-12] Initializing /data/public/2012-06/z-series-time-series.ome.xml: [testng] [2024-12-18 13:02:21,782] [pool-1-thread-6] Initializing /data/public/2015-01/xmlannotation-body-space.ome.xml: [testng] [2024-12-18 13:02:26,472] [pool-1-thread-11] Initializing /data/public/2008-09/z-series-time-series.ome.xml: [testng] [2024-12-18 13:02:30,218] [pool-1-thread-9] Initializing /data/public/2015-01/timestampannotation-posix-only.ome.xml: [testng] [2024-12-18 13:02:37,928] [pool-1-thread-5] Initializing /data/public/2016-06/minimum-specification.ome.xml: [testng] [2024-12-18 13:02:39,593] [pool-1-thread-12] Initializing /data/public/2015-01/minimum-specification.ome.xml: [testng] [2024-12-18 13:02:43,124] [pool-1-thread-10] Initializing /data/public/2010-06/multi-channel-z-series-time-series.ome.xml: [testng] [2024-12-18 13:02:46,162] [pool-1-thread-4] Initializing /data/public/2008-09/multi-pixel-aquired.ome.xml: [testng] [2024-12-18 13:02:48,203] [pool-1-thread-2] Initializing /data/public/2015-01/timestampannotation.ome.xml: [testng] [2024-12-18 13:02:49,736] [pool-1-thread-8] Initializing /data/public/2012-06/multi-channel-z-series.ome.xml: [testng] [2024-12-18 13:02:50,978] [pool-1-thread-7] Initializing /data/public/2010-06/multi-channel.ome.xml: [testng] [2024-12-18 13:02:52,695] [pool-1-thread-3] Initializing /data/samples/Sample-2003_FC.ome: [testng] [2024-12-18 13:02:55,872] [pool-1-thread-1] Initializing /data/public/2015-01/z-series.ome.xml: [testng] [2024-12-18 13:02:59,139] [pool-1-thread-6] Initializing /data/public/2013-06/commentannotation.ome.xml: [testng] [2024-12-18 13:03:09,911] [pool-1-thread-11] Initializing /data/public/2010-04/multi-channel-time-series.ome.xml: [testng] [2024-12-18 13:03:11,485] [pool-1-thread-9] Initializing /data/public/2012-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-12-18 13:03:18,135] [pool-1-thread-12] Initializing /data/public/2010-06/ROI.ome.xml: [testng] [2024-12-18 13:03:19,550] [pool-1-thread-4] Initializing /data/public/2011-06/metadata-only.ome.xml: [testng] [2024-12-18 13:03:22,985] [pool-1-thread-8] Initializing /data/public/2016-06/multi-channel-z-series.ome.xml: [testng] [2024-12-18 13:03:25,776] [pool-1-thread-7] Initializing /data/public/2011-06/transformations-upgrade.ome.xml: [testng] [2024-12-18 13:03:28,028] [pool-1-thread-5] Initializing /data/public/2013-06/no-date.ome.xml: [testng] [2024-12-18 13:03:29,381] [pool-1-thread-1] Initializing /data/public/2016-06/no-date.ome.xml: [testng] [2024-12-18 13:03:30,615] [pool-1-thread-10] Initializing /data/samples/Sample-2007_06.ome: [testng] [2024-12-18 13:03:31,969] [pool-1-thread-2] Initializing /data/public/2010-06/filter.ome.xml: [testng] [2024-12-18 13:03:33,330] [pool-1-thread-3] Initializing /data/public/2010-06/instrument.ome.xml: [testng] [2024-12-18 13:03:35,272] [pool-1-thread-6] Initializing /data/public/2011-06/z-series-time-series.ome.xml: [testng] [2024-12-18 13:03:46,004] [pool-1-thread-11] Initializing /data/public/2015-01/single-image.ome.xml: [testng] [2024-12-18 13:03:47,762] [pool-1-thread-9] Initializing /data/public/2015-01/instrument.ome.xml: [testng] [2024-12-18 13:03:54,756] [pool-1-thread-1] Initializing /data/public/2016-06/z-series.ome.xml: [testng] [2024-12-18 13:03:55,960] [pool-1-thread-3] Initializing /data/public/2009-09/metadata-only.ome.xml: [testng] [2024-12-18 13:03:57,164] [pool-1-thread-2] Initializing /data/public/2012-06/instrument.ome.xml: [testng] [2024-12-18 13:03:58,560] [pool-1-thread-12] Initializing /data/public/2010-04/multi-channel.ome.xml: [testng] [2024-12-18 13:03:59,738] [pool-1-thread-4] Initializing /data/public/2013-06/multi-channel-time-series.ome.xml: [testng] [2024-12-18 13:04:00,756] [pool-1-thread-8] Initializing /data/public/2012-06/multi-channel-z-series-time-series.ome.xml: [testng] [2024-12-18 13:04:01,631] [pool-1-thread-5] Initializing /data/public/2015-01/filter.ome.xml: [testng] [2024-12-18 13:04:02,650] [pool-1-thread-7] Initializing /data/public/2012-06/multi-channel.ome.xml: [testng] [2024-12-18 13:04:03,913] [pool-1-thread-10] Initializing /data/public/2008-09/multi-channel.ome.xml: [testng] [2024-12-18 13:04:05,944] [pool-1-thread-6] Initializing /data/public/2009-09/z-series.ome.xml: [testng] [2024-12-18 13:04:17,698] [pool-1-thread-11] Initializing /data/curtis/all-black.tif: [testng] [2024-12-18 13:04:28,375] [pool-1-thread-9] Initializing /data/public/2015-01/multi-channel-time-series.ome.xml: [testng] [2024-12-18 13:04:37,892] [pool-1-thread-5] Initializing /data/melissa/large-xml-test.ome: [testng] [2024-12-18 13:04:49,157] [pool-1-thread-10] Initializing /data/public/2013-06/multi-channel.ome.xml: [testng] [2024-12-18 13:04:50,724] [pool-1-thread-12] Initializing /data/public/2012-06/transformations-upgrade.ome.xml: [testng] [2024-12-18 13:04:52,215] [pool-1-thread-4] Initializing /data/public/2011-06/instrument.ome.xml: [testng] [2024-12-18 13:04:53,746] [pool-1-thread-1] Initializing /data/curtis/black6-7.tif: [testng] [2024-12-18 13:05:02,413] [pool-1-thread-3] Initializing /data/public/2008-09/multi-channel-z-series-time-series.ome.xml: [testng] [2024-12-18 13:05:03,514] [pool-1-thread-7] Initializing /data/samples/testImportPlateMultiplePlateAcquisitions1508.ome: [testng] [2024-12-18 13:05:04,500] [pool-1-thread-8] Initializing /data/public/2013-06/transformations-upgrade.ome.xml: [testng] [2024-12-18 13:05:05,841] [pool-1-thread-2] Initializing /data/public/2015-01/mapannotation.ome.xml: [testng] [2024-12-18 13:05:06,945] [pool-1-thread-6] Initializing /data/public/2010-06/no-date.ome.xml: [testng] [2024-12-18 13:05:11,207] [pool-1-thread-9] Initializing /data/public/2015-01/transformations-downgrade.ome.xml: [testng] [2024-12-18 13:05:15,164] [pool-1-thread-2] Initializing /data/public/2013-06/z-series.ome.xml: [testng] [2024-12-18 13:05:16,955] [pool-1-thread-4] Initializing /data/public/2012-06/filter.ome.xml: [testng] [2024-12-18 13:05:18,349] [pool-1-thread-10] Initializing /data/public/2016-06/ROI.ome.xml: [testng] [2024-12-18 13:05:19,128] [pool-1-thread-8] Initializing /data/samples/Antarctic_Diatom_D3D_01.ome: [testng] [2024-12-18 13:05:20,324] [pool-1-thread-3] Initializing /data/public/2015-01/no-date.ome.xml: [testng] [2024-12-18 13:05:20,979] [pool-1-thread-12] Initializing /data/public/2013-06/filter.ome.xml: [testng] [2024-12-18 13:05:21,792] [pool-1-thread-7] Initializing /data/public/2013-06/time-series.ome.xml: [testng] [2024-12-18 13:05:22,617] [pool-1-thread-6] Initializing /data/public/2008-09/dataset-group-project.ome.xml: [testng] [2024-12-18 13:05:28,282] [pool-1-thread-9] Initializing /data/public/2013-06/z-series-time-series.ome.xml: [testng] [2024-12-18 13:05:32,618] [pool-1-thread-3] Initializing /data/public/2016-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-12-18 13:05:33,744] [pool-1-thread-4] Initializing /data/public/2008-09/z-series.ome.xml: [testng] [2024-12-18 13:05:34,509] [pool-1-thread-2] Initializing /data/public/2015-01/metadata-only.ome.xml: [testng] [2024-12-18 13:05:35,198] [pool-1-thread-10] Initializing /data/public/2012-06/tagannotation.ome.xml: [testng] [2024-12-18 13:05:35,877] [pool-1-thread-12] Initializing /data/public/2016-06/time-series.ome.xml: [testng] [2024-12-18 13:05:36,544] [pool-1-thread-7] Initializing /data/public/2010-04/multi-channel-z-series-time-series.ome.xml: [testng] [2024-12-18 13:05:37,291] [pool-1-thread-6] Initializing /data/public/2013-06/tagannotation.ome.xml: [testng] [2024-12-18 13:05:38,051] [pool-1-thread-11] Initializing /data/public/2016-06/filter.ome.xml: [testng] [2024-12-18 13:05:39,046] [pool-1-thread-8] Initializing /data/public/2009-09/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-12-18 13:05:42,432] [pool-1-thread-9] Initializing /data/public/2010-04/multi-channel-z-series.ome.xml: [testng] [2024-12-18 13:05:43,033] [pool-1-thread-1] Initializing /data/public/2010-06/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-12-18 13:05:45,046] [pool-1-thread-2] Initializing /data/public/2008-09/multi-channel-time-series.ome.xml: [testng] [2024-12-18 13:05:45,906] [pool-1-thread-6] Initializing /data/public/2010-04/ROI.ome.xml: [testng] [2024-12-18 13:05:46,604] [pool-1-thread-4] Initializing /data/public/2009-09/ROI.ome.xml: [testng] [2024-12-18 13:05:47,246] [pool-1-thread-10] Initializing /data/public/2016-06/timestampannotation-posix-only.ome.xml: [testng] [2024-12-18 13:05:47,924] [pool-1-thread-12] Initializing /data/public/2016-06/instrument.ome.xml: [testng] [2024-12-18 13:05:48,781] [pool-1-thread-7] Initializing /data/public/2009-09/multi-channel-z-series-time-series.ome.xml: [testng] [2024-12-18 13:05:50,536] [pool-1-thread-3] Initializing /data/public/2013-06/metadata-only.ome.xml: [testng] [2024-12-18 13:05:51,822] [pool-1-thread-11] Initializing /data/public/2016-06/xmlannotation-body-space.ome.xml: [testng] [2024-12-18 13:05:55,665] [pool-1-thread-8] Initializing /data/public/2009-09/time-series.ome.xml: [testng] [2024-12-18 13:05:57,639] [pool-1-thread-9] Initializing /data/public/2010-06/z-series.ome.xml: [testng] [2024-12-18 13:05:58,384] [pool-1-thread-1] Initializing /data/public/2013-06/multi-channel-z-series.ome.xml: [testng] [2024-12-18 13:06:00,616] [pool-1-thread-3] Initializing /data/public/2016-06/multi-channel-time-series.ome.xml: [testng] [2024-12-18 13:06:01,228] [pool-1-thread-12] Initializing /data/public/2016-06/multi-channel.ome.xml: [testng] [2024-12-18 13:06:01,830] [pool-1-thread-11] Initializing /data/public/2016-06/metadata-only.ome.xml: [testng] [2024-12-18 13:06:02,429] [pool-1-thread-6] Initializing /data/public/2016-06/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-12-18 13:06:02,974] [pool-1-thread-4] Initializing /data/public/2015-01/hcs.ome.xml: [testng] [2024-12-18 13:06:03,561] [pool-1-thread-2] Initializing /data/samples/sdub.ome: [testng] [2024-12-18 13:06:04,205] [pool-1-thread-10] Initializing /data/public/2015-01/multi-channel.ome.xml: [testng] [2024-12-18 13:06:04,749] [pool-1-thread-7] Initializing /data/public/2010-06/z-series-time-series.ome.xml: [testng] [2024-12-18 13:06:05,813] [pool-1-thread-8] Initializing /data/curtis/min-sample-2008-02.ome: [testng] [2024-12-18 13:06:09,110] [pool-1-thread-1] Initializing /data/public/2012-06/multi-channel-time-series.ome.xml: [testng] [2024-12-18 13:06:09,720] [pool-1-thread-9] Initializing /data/public/2015-01/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-12-18 13:06:12,154] [pool-1-thread-11] Initializing /data/public/2016-06/mapannotation.ome.xml: [testng] [2024-12-18 13:06:12,816] [pool-1-thread-12] Initializing /data/public/2016-06/instrument-units-default.ome.xml: [testng] [2024-12-18 13:06:13,414] [pool-1-thread-10] Initializing /data/public/2009-09/z-series-time-series.ome.xml: [testng] [2024-12-18 13:06:14,221] [pool-1-thread-3] Initializing /data/public/2010-04/z-series-time-series.ome.xml: [testng] [2024-12-18 13:06:14,794] [pool-1-thread-6] Initializing /data/public/2016-06/hcs.ome.xml: [testng] [2024-12-18 13:06:15,429] [pool-1-thread-4] Initializing /data/public/2012-06/single-image.ome.xml: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 10706, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 17 minutes 1 second Finished: SUCCESS