![[Jenkins]](/jenkins/static/f5fa13f0/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 295 originally caused by: Started by upstream project "Trigger" build number 314 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2 [BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins10071100472186264416.sh + '[' pict = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_46623_merge_ci -v /uod/idr/repos/curated/pict:/data -v /uod/idr-scratch/merge-ci/curated/pict:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:01:50,521 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:01:50,522 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - No custom configurators were discovered as a service. [testng] 01:01:50,522 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:01:50,524 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:01:50,525 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:01:50,525 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:01:50,526 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:01:50,526 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:01:50,526 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:01:50,527 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:01:50,528 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:01:50,528 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:01:50,705 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:01:50,705 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:01:50,740 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:01:50,740 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:01:50,747 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:01:50,747 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:01:50,747 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:01:50,747 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:01:50,747 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@29215f06 - End of configuration. [testng] 01:01:50,748 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@b9b00e0 - Registering current configuration as safe fallback point [testng] 01:01:50,748 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 222 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-19 01:01:50,759] [main] java.version = 21 [testng] 01:01:50,763 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:01:50,764 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:01:50,811 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-19_01-01-50.log] [testng] 01:01:50,812 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b919693 - End of configuration. [testng] [2024-12-19 01:01:50,813] [main] testng.directory = /data [testng] [2024-12-19 01:01:50,814] [main] testng.configDirectory = /config [testng] [2024-12-19 01:01:50,822] [main] testng.multiplier = 1.0 [testng] [2024-12-19 01:01:50,823] [main] testng.in-memory = false [testng] [2024-12-19 01:01:50,823] [main] testng.allow-missing = false [testng] [2024-12-19 01:01:50,823] [main] user.language = en [testng] [2024-12-19 01:01:50,823] [main] user.country = ${user.country} [testng] [2024-12-19 01:01:50,823] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-12-19 01:01:52,353] [main] ---------------------------------------- [testng] [2024-12-19 01:01:52,353] [main] Total files: 25 [testng] [2024-12-19 01:01:52,353] [main] Scan time: 1.53 s (61 ms/file) [testng] [2024-12-19 01:01:52,354] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 25 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-19 01:02:02,035] [pool-1-thread-1] Initializing /data/wayne/PotatoMeristem.pict: [testng] 01:02:02,035 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:02:02,036 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:02:02,037 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-19_01-02-02.log] [testng] 01:02:02,037 |-INFO in ch.qos.logback.core.sift.SiftProcessor@48f1008f - End of configuration. [testng] [2024-12-19 01:02:02,599] [pool-1-thread-12] Initializing /data/brian/images/FLAG_B24.PCT: [testng] 01:02:02,599 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:02:02,599 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:02:02,600 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-19_01-02-02.log] [testng] 01:02:02,601 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f8c191d - End of configuration. [testng] [2024-12-19 01:02:03,191] [pool-1-thread-11] Initializing /data/jqd/sixteenBit.pict: [testng] 01:02:03,191 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:02:03,191 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:02:03,192 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-19_01-02-03.log] [testng] 01:02:03,192 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1e81467b - End of configuration. [testng] [2024-12-19 01:02:04,174] [pool-1-thread-10] Initializing /data/misc/planet2.pict: [testng] 01:02:04,174 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:02:04,175 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:02:04,175 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-19_01-02-04.log] [testng] 01:02:04,175 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a54b9bf - End of configuration. [testng] [2024-12-19 01:02:05,237] [pool-1-thread-9] Initializing /data/brian/images/FLAG_B32.pct: [testng] 01:02:05,237 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:02:05,237 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:02:05,238 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-19_01-02-05.log] [testng] 01:02:05,238 |-INFO in ch.qos.logback.core.sift.SiftProcessor@66123dd0 - End of configuration. [testng] [2024-12-19 01:02:05,809] [pool-1-thread-8] Initializing /data/misc/swlogo.pict: [testng] 01:02:05,809 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:02:05,810 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:02:05,810 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-19_01-02-05.log] [testng] 01:02:05,811 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a511d88 - End of configuration. [testng] [2024-12-19 01:02:06,442] [pool-1-thread-7] Initializing /data/brian/images/TRU256.PCT: [testng] 01:02:06,442 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:02:06,442 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:02:06,443 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-19_01-02-06.log] [testng] 01:02:06,443 |-INFO in ch.qos.logback.core.sift.SiftProcessor@370c073 - End of configuration. [testng] [2024-12-19 01:02:07,050] [pool-1-thread-6] Initializing /data/jqd/mireSixteen.pict: [testng] 01:02:07,050 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:02:07,051 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:02:07,051 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-19_01-02-07.log] [testng] 01:02:07,052 |-INFO in ch.qos.logback.core.sift.SiftProcessor@31eb3162 - End of configuration. [testng] [2024-12-19 01:02:08,049] [pool-1-thread-5] Initializing /data/brian/images/FLAG_B32_COMPRESSED.pct: [testng] 01:02:08,050 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:02:08,050 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:02:08,050 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-19_01-02-08.log] [testng] 01:02:08,051 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1045bef1 - End of configuration. [testng] [2024-12-19 01:02:08,329] [pool-1-thread-4] Initializing /data/brian/images/VENUS.pct: [testng] 01:02:08,329 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:02:08,330 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:02:08,330 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-19_01-02-08.log] [testng] 01:02:08,331 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4cb879d8 - End of configuration. [testng] [2024-12-19 01:02:08,576] [pool-1-thread-3] Initializing /data/brian/images/FLAG_RGB.pct: [testng] 01:02:08,576 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:02:08,576 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:02:08,576 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-19_01-02-08.log] [testng] 01:02:08,577 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7bbbb7ef - End of configuration. [testng] [2024-12-19 01:02:08,775] [pool-1-thread-2] Initializing /data/brian/images/BLK.PCT: [testng] 01:02:08,775 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:02:08,775 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:02:08,776 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-19_01-02-08.log] [testng] 01:02:08,776 |-INFO in ch.qos.logback.core.sift.SiftProcessor@73fe3107 - End of configuration. [testng] [2024-12-19 01:02:14,904] [pool-1-thread-6] Initializing /data/brian/images/YEL.PCT: [testng] [2024-12-19 01:02:15,401] [pool-1-thread-5] Initializing /data/brian/images/WHT.PCT: [testng] [2024-12-19 01:02:15,824] [pool-1-thread-3] Initializing /data/brian/images/GRN.PCT: [testng] [2024-12-19 01:02:16,071] [pool-1-thread-8] Initializing /data/misc/planet.png: [testng] [2024-12-19 01:02:16,094] [pool-1-thread-9] Initializing /data/brian/images/MARBLES_B32_COMPRESSED.pct: [testng] [2024-12-19 01:02:16,474] [pool-1-thread-12] Initializing /data/brian/images/RED.PCT: [testng] [2024-12-19 01:02:17,430] [pool-1-thread-7] Initializing /data/brian/images/BLU.PCT: [testng] [2024-12-19 01:02:18,688] [pool-1-thread-11] Initializing /data/misc/planet.pict: [testng] [2024-12-19 01:02:19,597] [pool-1-thread-2] Initializing /data/jqd/mire32.pict: [testng] [2024-12-19 01:02:19,930] [pool-1-thread-1] Initializing /data/brian/images/MARBLES_B32.pct: [testng] [2024-12-19 01:02:20,540] [pool-1-thread-10] Initializing /data/jqd/32bit.pict: [testng] [2024-12-19 01:02:20,916] [pool-1-thread-4] Initializing /data/brian/images/MARBLES_RGB.pct: [testng] [2024-12-19 01:02:23,492] [pool-1-thread-8] Initializing /data/brian/images/MARBLES_B24.PCT: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 1325, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 43 seconds Finished: SUCCESS