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Started by upstream project "BIOFORMATS-test-repo" build number 34 originally caused by: Started by upstream project "Trigger" build number 38 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@9 [BIOFORMATS-test-folder@9] $ /bin/bash -xe /tmp/jenkins11011094747070607186.sh + '[' ventana = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_4665_merge_ci -v /uod/idr/repos/curated/ventana:/data -v /uod/idr-scratch/merge-ci/curated/ventana:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 02:14:38,569 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:14:38,622 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:14:38,657 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:14:38,657 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:14:38,669 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:14:38,669 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:14:38,669 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:14:38,670 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:14:38,670 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration. [testng] 02:14:38,671 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point [testng] 02:14:38,671 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 421 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-04-15 02:14:38,682] [main] java.version = 1.8.0_342 [testng] 02:14:38,686 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:14:38,686 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:14:38,735 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-15_02-14-38.log] [testng] 02:14:38,737 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-04-15 02:14:38,739] [main] testng.directory = /data [testng] [2024-04-15 02:14:38,740] [main] testng.configDirectory = /config [testng] [2024-04-15 02:14:38,753] [main] testng.multiplier = 1.0 [testng] [2024-04-15 02:14:38,753] [main] testng.in-memory = false [testng] [2024-04-15 02:14:38,753] [main] testng.allow-missing = false [testng] [2024-04-15 02:14:38,753] [main] user.language = fr [testng] [2024-04-15 02:14:38,754] [main] user.country = FR [testng] [2024-04-15 02:14:38,754] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-04-15 02:14:39,366] [main] ---------------------------------------- [testng] [2024-04-15 02:14:39,366] [main] Total files: 10 [testng] [2024-04-15 02:14:39,366] [main] Scan time: 0.612 s (61 ms/file) [testng] [2024-04-15 02:14:39,366] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 10 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-04-15 02:14:44,858] [pool-1-thread-1] Initializing /data/public/openslide/OS-2.bif: [testng] 02:14:44,858 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:14:44,858 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:14:44,859 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-15_02-14-44.log] [testng] 02:14:44,860 |-INFO in ch.qos.logback.core.sift.SiftProcessor@42cfd61f - End of configuration. [testng] [2024-04-15 02:14:45,049] [pool-1-thread-10] Initializing /data/gh3570/UMFZ-_175_06142018091319AM.bif: [testng] 02:14:45,049 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:14:45,049 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:14:45,051 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-15_02-14-45.log] [testng] 02:14:45,052 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f7af6e6 - End of configuration. [testng] [2024-04-15 02:14:45,215] [pool-1-thread-9] Initializing /data/qa-11086/3.bif: [testng] 02:14:45,215 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:14:45,215 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:14:45,216 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-15_02-14-45.log] [testng] 02:14:45,217 |-INFO in ch.qos.logback.core.sift.SiftProcessor@177ff2a - End of configuration. [testng] [2024-04-15 02:14:45,369] [pool-1-thread-8] Initializing /data/qa-11086/2.bif: [testng] 02:14:45,369 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:14:45,369 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:14:45,370 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-15_02-14-45.log] [testng] 02:14:45,370 |-INFO in ch.qos.logback.core.sift.SiftProcessor@59ef88c2 - End of configuration. [testng] [2024-04-15 02:14:45,412] [pool-1-thread-7] Initializing /data/qa-11086/CASO_2_20X_HD_4_16.bif: [testng] 02:14:45,412 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:14:45,412 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:14:45,413 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-15_02-14-45.log] [testng] 02:14:45,414 |-INFO in ch.qos.logback.core.sift.SiftProcessor@607fd980 - End of configuration. [testng] [2024-04-15 02:14:45,472] [pool-1-thread-6] Initializing /data/gh-3927/imagesc-75002/ome-bioformats-bug.bif: [testng] 02:14:45,472 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:14:45,472 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:14:45,473 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-15_02-14-45.log] [testng] 02:14:45,474 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3f0da1c1 - End of configuration. [testng] [2024-04-15 02:14:45,562] [pool-1-thread-5] Initializing /data/qa-27763/QuPath Bio-Formats sample file.tif: [testng] 02:14:45,562 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:14:45,562 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:14:45,563 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-15_02-14-45.log] [testng] 02:14:45,563 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2e4ed7eb - End of configuration. [testng] [2024-04-15 02:14:45,872] [pool-1-thread-4] Initializing /data/public/openslide/OS-1.bif: [testng] 02:14:45,873 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:14:45,873 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:14:45,874 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-15_02-14-45.log] [testng] 02:14:45,875 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d566e42 - End of configuration. [testng] [2024-04-15 02:14:46,105] [pool-1-thread-3] Initializing /data/gh-3927/imagesc-75221/A-180000004-01-M-001.bif: [testng] 02:14:46,106 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:14:46,106 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:14:46,108 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-15_02-14-46.log] [testng] 02:14:46,109 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1e701ecb - End of configuration. [testng] [2024-04-15 02:14:46,212] [pool-1-thread-2] Initializing /data/gh-3927/imagesc-75221/B-210004684-01-A-001.bif: [testng] 02:14:46,212 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:14:46,212 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:14:46,213 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-15_02-14-46.log] [testng] 02:14:46,213 |-INFO in ch.qos.logback.core.sift.SiftProcessor@b1e57e4 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 530, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 5 seconds Finished: SUCCESS