![[Jenkins]](/jenkins/static/695419c3/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 297 originally caused by: Started by upstream project "Trigger" build number 319 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins16638834948770769462.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_46945_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/metakit/5.3.8-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/maven-metadata.xml [resolver:resolve] Resolving artifacts [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/metakit/5.3.8-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/maven-metadata.xml compile-tests: [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/metakit/5.3.8-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/maven-metadata.xml [resolver:resolve] Resolving artifacts [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/metakit/5.3.8-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/maven-metadata.xml [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 00:36:25,039 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:36:25,040 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service. [testng] 00:36:25,040 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:36:25,041 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:36:25,041 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:36:25,042 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:36:25,042 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:36:25,042 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:36:25,042 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:36:25,043 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:36:25,043 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:36:25,043 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:36:25,265 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:36:25,265 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:36:25,292 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:36:25,292 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:36:25,300 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:36:25,300 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:36:25,301 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:36:25,301 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:36:25,301 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration. [testng] 00:36:25,302 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point [testng] 00:36:25,302 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 260 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-24 00:36:25,312] [main] java.version = 1.8.0_342 [testng] 00:36:25,315 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:36:25,315 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:36:25,359 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-24_00-36-25.log] [testng] 00:36:25,361 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-12-24 00:36:25,363] [main] testng.directory = /data [testng] [2024-12-24 00:36:25,363] [main] testng.configDirectory = /config [testng] [2024-12-24 00:36:25,375] [main] testng.multiplier = 1.0 [testng] [2024-12-24 00:36:25,375] [main] testng.in-memory = false [testng] [2024-12-24 00:36:25,375] [main] testng.allow-missing = false [testng] [2024-12-24 00:36:25,375] [main] user.language = en [testng] [2024-12-24 00:36:25,375] [main] user.country = ${user.country} [testng] [2024-12-24 00:36:25,375] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-12-24 00:36:52,181] [main] ---------------------------------------- [testng] [2024-12-24 00:36:52,181] [main] Total files: 259 [testng] [2024-12-24 00:36:52,181] [main] Scan time: 26.806 s (103 ms/file) [testng] [2024-12-24 00:36:52,181] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-24 00:46:13,511] [pool-1-thread-1] Initializing /data/johannes/step4b.bmp: [testng] 00:46:13,511 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:46:13,512 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:13,512 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-24_00-46-13.log] [testng] 00:46:13,513 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7d93db28 - End of configuration. [testng] [2024-12-24 00:46:13,684] [pool-1-thread-12] Initializing /data/qa-17748/Image0098.oib: [testng] 00:46:13,684 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:46:13,684 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:13,685 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-24_00-46-13.log] [testng] 00:46:13,685 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3b0c9c2b - End of configuration. [testng] [2024-12-24 00:46:13,970] [pool-1-thread-11] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] 00:46:13,970 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:46:13,970 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:13,971 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-24_00-46-13.log] [testng] 00:46:13,971 |-INFO in ch.qos.logback.core.sift.SiftProcessor@57a56e2a - End of configuration. [testng] [2024-12-24 00:46:14,618] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] 00:46:14,619 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:46:14,619 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:14,619 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-24_00-46-14.log] [testng] 00:46:14,620 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4a19add3 - End of configuration. [testng] [2024-12-24 00:46:15,715] [pool-1-thread-9] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] 00:46:15,716 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:46:15,716 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:15,716 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-24_00-46-15.log] [testng] 00:46:15,717 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f91a945 - End of configuration. [testng] [2024-12-24 00:46:16,300] [pool-1-thread-8] Initializing /data/glen/singlesimul.oif: [testng] 00:46:16,300 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:46:16,300 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:16,301 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-24_00-46-16.log] [testng] 00:46:16,301 |-INFO in ch.qos.logback.core.sift.SiftProcessor@63212720 - End of configuration. [testng] [2024-12-24 00:46:16,885] [pool-1-thread-7] Initializing /data/molly/11OCT11.OIF: [testng] 00:46:16,885 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:46:16,885 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:16,886 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-24_00-46-16.log] [testng] 00:46:16,886 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f239e07 - End of configuration. [testng] [2024-12-24 00:46:25,900] [pool-1-thread-6] Initializing /data/brian/CFP-GFP2.oib: [testng] 00:46:25,900 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:46:25,900 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:25,900 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-24_00-46-25.log] [testng] 00:46:25,901 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2627a5da - End of configuration. [testng] [2024-12-24 00:46:26,391] [pool-1-thread-5] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] 00:46:26,391 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:46:26,391 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:26,392 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-24_00-46-26.log] [testng] 00:46:26,392 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79d2af2b - End of configuration. [testng] [2024-12-24 00:46:26,700] [pool-1-thread-4] Initializing /data/molly/11OCT2.OIF: [testng] 00:46:26,700 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:46:26,700 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:26,701 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-24_00-46-26.log] [testng] 00:46:26,702 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6ffd3a4b - End of configuration. [testng] [2024-12-24 00:46:38,692] [pool-1-thread-3] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] 00:46:38,692 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:46:38,692 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:38,692 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-24_00-46-38.log] [testng] 00:46:38,693 |-INFO in ch.qos.logback.core.sift.SiftProcessor@483d0361 - End of configuration. [testng] [2024-12-24 00:46:39,330] [pool-1-thread-2] Initializing /data/stefan/cytosol_08b.oif: [testng] 00:46:39,330 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:46:39,331 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:39,331 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-24_00-46-39.log] [testng] 00:46:39,332 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ecca274 - End of configuration. [testng] [2024-12-24 00:46:44,910] [pool-1-thread-1] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2024-12-24 00:46:46,438] [pool-1-thread-12] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2024-12-24 00:46:47,093] [pool-1-thread-5] Initializing /data/glen/notsaturated.oib: [testng] [2024-12-24 00:46:47,755] [pool-1-thread-6] Initializing /data/johannes/step5b.bmp: [testng] [2024-12-24 00:46:48,438] [pool-1-thread-10] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2024-12-24 00:46:48,899] [pool-1-thread-9] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2024-12-24 00:46:49,473] [pool-1-thread-11] Initializing /data/johannes/step3.bmp: [testng] [2024-12-24 00:46:50,602] [pool-1-thread-6] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-12-24 00:46:52,043] [pool-1-thread-1] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2024-12-24 00:46:52,850] [pool-1-thread-11] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-12-24 00:46:53,458] [pool-1-thread-12] Initializing /data/molly/11OCT10.OIF: [testng] [2024-12-24 00:47:07,269] [pool-1-thread-5] Initializing /data/glen/notsaturated.oif: [testng] [2024-12-24 00:47:09,978] [pool-1-thread-10] Initializing /data/molly/11OCT3.OIF: [testng] [2024-12-24 00:47:54,000] [pool-1-thread-9] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2024-12-24 00:47:55,476] [pool-1-thread-6] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-12-24 00:47:56,573] [pool-1-thread-11] Initializing /data/glen/simulstack.oif: [testng] [2024-12-24 00:48:00,432] [pool-1-thread-1] Initializing /data/aryeh/1h.oib: [testng] [2024-12-24 00:48:03,900] [pool-1-thread-6] Initializing /data/molly/11OCT8.OIF: [testng] [2024-12-24 00:48:17,801] [pool-1-thread-3] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2024-12-24 00:48:18,647] [pool-1-thread-8] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2024-12-24 00:48:22,522] [pool-1-thread-1] Initializing /data/christian/20min.oif: [testng] [2024-12-24 00:48:27,120] [pool-1-thread-3] Initializing /data/brian/Lambda10nm.oib: [testng] [2024-12-24 00:48:31,329] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2024-12-24 00:48:37,735] [pool-1-thread-3] Initializing /data/david/Image0016.oib: [testng] [2024-12-24 00:48:40,705] [pool-1-thread-1] Initializing /data/glen/singleseqline.oif: [testng] [2024-12-24 00:48:41,865] [pool-1-thread-3] Initializing /data/glen/simulstack.oib: [testng] [2024-12-24 00:48:46,169] [pool-1-thread-3] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2024-12-24 00:48:50,338] [pool-1-thread-8] Initializing /data/chris/missegragation-15.oib: [testng] [2024-12-24 00:48:50,820] [pool-1-thread-3] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2024-12-24 00:48:54,770] [pool-1-thread-3] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2024-12-24 00:48:55,272] [pool-1-thread-8] Initializing /data/glen/111407.oif: [testng] [2024-12-24 00:49:01,550] [pool-1-thread-3] Initializing /data/glen/seqlinestack.oif: [testng] [2024-12-24 00:49:16,930] [pool-1-thread-1] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2024-12-24 00:52:06,955] [pool-1-thread-9] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2024-12-24 00:52:09,044] [pool-1-thread-9] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2024-12-24 00:52:15,992] [pool-1-thread-9] Initializing /data/kay/IM2pg.oib: [testng] [2024-12-24 00:52:22,907] [pool-1-thread-9] Initializing /data/glen/4205basal106072.oif: [testng] [2024-12-24 00:55:22,328] [pool-1-thread-5] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2024-12-24 00:59:29,034] [pool-1-thread-5] Initializing /data/sten/01.oib: [testng] [2024-12-24 00:59:46,003] [pool-1-thread-5] Initializing /data/david/Image0016.oif: [testng] [2024-12-24 01:01:57,919] [pool-1-thread-5] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-12-24 01:02:05,796] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-12-24 01:02:14,560] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] [2024-12-24 01:02:23,469] [pool-1-thread-5] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2024-12-24 01:02:27,558] [pool-1-thread-5] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] [2024-12-24 01:02:33,867] [pool-1-thread-5] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-12-24 01:02:40,295] [pool-1-thread-5] Initializing /data/molly/11OCT9.OIF: [testng] [2024-12-24 01:08:51,000] [pool-1-thread-11] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] [2024-12-24 01:08:58,575] [pool-1-thread-11] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-12-24 01:11:02,905] [pool-1-thread-8] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-12-24 01:11:11,992] [pool-1-thread-8] Initializing /data/michael/CELL3.oib: [testng] [2024-12-24 01:11:20,549] [pool-1-thread-8] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-12-24 01:11:30,564] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-12-24 01:11:41,789] [pool-1-thread-8] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2024-12-24 01:11:49,258] [pool-1-thread-8] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] [2024-12-24 01:20:57,576] [pool-1-thread-7] Initializing /data/brian/PA-GFP-3.oib: [testng] [2024-12-24 01:21:03,814] [pool-1-thread-6] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-12-24 01:21:12,706] [pool-1-thread-7] Initializing /data/johannes/step4.bmp: [testng] [2024-12-24 01:21:16,707] [pool-1-thread-7] Initializing /data/molly/11OCT7.OIF: [testng] [2024-12-24 01:22:15,445] [pool-1-thread-1] Initializing /data/francesco/fGfp.c15.oib: [testng] [2024-12-24 01:22:26,227] [pool-1-thread-1] Initializing /data/simon/never_worked.oib: [testng] [2024-12-24 01:22:34,342] [pool-1-thread-1] Initializing /data/yasunori/series_1.oib: [testng] [2024-12-24 01:22:42,759] [pool-1-thread-1] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-12-24 01:22:48,740] [pool-1-thread-2] Initializing /data/glen/singleseqframe.oif: [testng] [2024-12-24 01:22:53,162] [pool-1-thread-6] Initializing /data/molly/11OCT6.OIF: [testng] [2024-12-24 01:24:20,220] [pool-1-thread-2] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2024-12-24 01:24:32,288] [pool-1-thread-2] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-12-24 01:24:40,311] [pool-1-thread-2] Initializing /data/allan/62909#1.oib: [testng] [2024-12-24 01:24:48,362] [pool-1-thread-2] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2024-12-24 01:24:59,623] [pool-1-thread-2] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] [2024-12-24 01:25:09,195] [pool-1-thread-2] Initializing /data/brian/lambda02nm.oib: [testng] [2024-12-24 01:25:17,790] [pool-1-thread-2] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-12-24 01:26:16,920] [pool-1-thread-2] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2024-12-24 01:28:50,100] [pool-1-thread-3] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-12-24 01:28:52,290] [pool-1-thread-8] Initializing /data/karl/Image0009.oib: [testng] [2024-12-24 01:28:56,984] [pool-1-thread-12] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2024-12-24 01:28:59,009] [pool-1-thread-8] Initializing /data/molly/11OCT5.OIF: [testng] [2024-12-24 01:29:22,937] [pool-1-thread-3] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2024-12-24 01:29:26,006] [pool-1-thread-12] Initializing /data/monica/Image0056.oif: [testng] [2024-12-24 01:29:31,695] [pool-1-thread-3] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2024-12-24 01:29:46,084] [pool-1-thread-2] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2024-12-24 01:29:54,272] [pool-1-thread-2] Initializing /data/yoshihito/XY.oif: [testng] [2024-12-24 01:30:27,144] [pool-1-thread-2] Initializing /data/glen/singleseqframe.oib: [testng] [2024-12-24 01:30:31,460] [pool-1-thread-12] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] [2024-12-24 01:30:44,405] [pool-1-thread-2] Initializing /data/yoshihito/XY.oib: [testng] [2024-12-24 01:30:50,712] [pool-1-thread-2] Initializing /data/glen/Null file/test change.oif: [testng] [2024-12-24 01:31:30,411] [pool-1-thread-9] Initializing /data/aryeh/control_test.oib: [testng] [2024-12-24 01:31:43,785] [pool-1-thread-2] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-12-24 01:32:01,921] [pool-1-thread-9] Initializing /data/tom/zseries-test.oib: [testng] [2024-12-24 01:32:12,580] [pool-1-thread-9] Initializing /data/simon/used_to_work.oib: [testng] [2024-12-24 01:32:21,287] [pool-1-thread-9] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-12-24 01:32:30,562] [pool-1-thread-9] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-12-24 01:32:36,866] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-12-24 01:32:38,943] [pool-1-thread-9] Initializing /data/molly/11OCT4.OIF: [testng] [2024-12-24 01:33:10,545] [pool-1-thread-11] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] [2024-12-24 01:34:00,595] [pool-1-thread-11] Initializing /data/glen/Null file/test no change.oif: [testng] [2024-12-24 01:34:50,355] [pool-1-thread-11] Initializing /data/marc/V0606L.oib: [testng] [2024-12-24 01:35:10,616] [pool-1-thread-11] Initializing /data/glen/seqlinestack.oib: [testng] [2024-12-24 01:35:20,227] [pool-1-thread-11] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-12-24 01:35:21,845] [pool-1-thread-2] Initializing /data/marc/V0606J.oib: [testng] [2024-12-24 01:35:31,636] [pool-1-thread-11] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2024-12-24 01:35:36,964] [pool-1-thread-11] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2024-12-24 01:35:44,353] [pool-1-thread-2] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-12-24 01:35:46,909] [pool-1-thread-11] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2024-12-24 01:36:47,730] [pool-1-thread-2] Initializing /data/glen/Image0002.oif: [testng] [2024-12-24 01:37:37,557] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-12-24 01:37:45,107] [pool-1-thread-1] Initializing /data/pedro/plv-test.oib: [testng] [2024-12-24 01:37:51,748] [pool-1-thread-1] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2024-12-24 01:38:10,245] [pool-1-thread-1] Initializing /data/stefan/yc2_live-03.oib: [testng] [2024-12-24 01:38:22,100] [pool-1-thread-1] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-12-24 01:38:33,124] [pool-1-thread-1] Initializing /data/brian/FLIP.oib: [testng] [2024-12-24 01:38:46,074] [pool-1-thread-1] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-12-24 01:38:55,400] [pool-1-thread-1] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2024-12-24 01:41:38,850] [pool-1-thread-4] Initializing /data/tom/RGB-1.avi: [testng] [2024-12-24 01:41:45,484] [pool-1-thread-4] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2024-12-24 01:41:55,202] [pool-1-thread-4] Initializing /data/jae/Image0001.oib: [testng] [2024-12-24 01:42:05,305] [pool-1-thread-4] Initializing /data/johannes/step1.bmp: [testng] [2024-12-24 01:42:09,073] [pool-1-thread-4] Initializing /data/johannes/step2.bmp: [testng] [2024-12-24 01:42:12,972] [pool-1-thread-4] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2024-12-24 01:42:38,996] [pool-1-thread-3] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2024-12-24 01:43:09,181] [pool-1-thread-4] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2024-12-24 01:43:19,284] [pool-1-thread-4] Initializing /data/stefan/cytosol_01a.oif: [testng] [2024-12-24 01:48:31,283] [pool-1-thread-7] Initializing /data/stefan/cytosol_03e.oib: [testng] [2024-12-24 01:48:37,532] [pool-1-thread-3] Initializing /data/brian/Kaede15.oib: [testng] [2024-12-24 01:48:44,247] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-12-24 01:48:48,010] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2024-12-24 01:48:54,347] [pool-1-thread-7] Initializing /data/glen/singlesimul.oib: [testng] [2024-12-24 01:48:57,439] [pool-1-thread-3] Initializing /data/glen/singleseqline.oib: [testng] [2024-12-24 01:49:00,716] [pool-1-thread-7] Initializing /data/qa-17748/Image0079.oib: [testng] [2024-12-24 01:49:03,372] [pool-1-thread-3] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-12-24 01:49:07,531] [pool-1-thread-7] Initializing /data/aryeh/030408 2 1.oib: [testng] [2024-12-24 01:49:11,041] [pool-1-thread-3] Initializing /data/aryeh/1h_after_pdt.oib: [testng] 02:28:37,109 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:28:37,109 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:28:37,110 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-24_02-28-37.log] [testng] 02:28:37,110 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1e5d3bd - End of configuration. [testng] 02:58:49,615 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:58:49,615 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:58:49,617 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-24_02-58-49.log] [testng] 02:58:49,618 |-INFO in ch.qos.logback.core.sift.SiftProcessor@550f9112 - End of configuration. [testng] 03:33:13,891 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 03:33:13,891 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:33:13,893 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-24_03-33-13.log] [testng] 03:33:13,893 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c4424a8 - End of configuration. [testng] 03:38:55,087 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:38:55,087 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:38:55,088 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-24_03-38-55.log] [testng] 03:38:55,088 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3ececd11 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 182 minutes 38 seconds Finished: SUCCESS