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Started by upstream project "BIOFORMATS-test-repo" build number 298 originally caused by: Started by upstream project "Trigger" build number 320 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4 [BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins16509507891519268323.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 3 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_47110_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 00:50:58,987 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:50:58,988 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service. [testng] 00:50:58,988 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:50:58,989 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:50:58,989 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:50:58,990 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:50:58,990 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:50:58,990 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:50:58,990 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:50:58,991 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:50:58,991 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:50:58,991 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:50:59,152 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:50:59,152 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:50:59,173 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:50:59,174 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:50:59,179 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:50:59,179 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:50:59,179 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:50:59,179 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:50:59,180 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration. [testng] 00:50:59,181 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point [testng] 00:50:59,181 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 191 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-25 00:50:59,189] [main] java.version = 17.0.2 [testng] 00:50:59,192 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:50:59,192 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:50:59,232 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-25_00-50-59.log] [testng] 00:50:59,233 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration. [testng] [2024-12-25 00:50:59,235] [main] testng.directory = /data [testng] [2024-12-25 00:50:59,235] [main] testng.configDirectory = /config [testng] [2024-12-25 00:50:59,244] [main] testng.multiplier = 1.0 [testng] [2024-12-25 00:50:59,244] [main] testng.in-memory = false [testng] [2024-12-25 00:50:59,244] [main] testng.allow-missing = false [testng] [2024-12-25 00:50:59,244] [main] user.language = en [testng] [2024-12-25 00:50:59,245] [main] user.country = ${user.country} [testng] [2024-12-25 00:50:59,245] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-12-25 00:51:43,669] [main] ---------------------------------------- [testng] [2024-12-25 00:51:43,669] [main] Total files: 259 [testng] [2024-12-25 00:51:43,669] [main] Scan time: 44.424 s (171 ms/file) [testng] [2024-12-25 00:51:43,670] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-25 01:01:31,967] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] 01:01:31,968 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:01:31,968 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:01:31,970 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-25_01-01-31.log] [testng] 01:01:31,971 |-INFO in ch.qos.logback.core.sift.SiftProcessor@61ddaff5 - End of configuration. [testng] [2024-12-25 01:01:32,964] [pool-1-thread-12] Initializing /data/stefan/yc2_live-03.oib: [testng] 01:01:32,964 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:01:32,965 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:01:32,965 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-25_01-01-32.log] [testng] 01:01:32,966 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7737260d - End of configuration. [testng] [2024-12-25 01:01:34,573] [pool-1-thread-11] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] 01:01:34,573 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:01:34,574 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:01:34,575 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-25_01-01-34.log] [testng] 01:01:34,575 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a23b77a - End of configuration. [testng] [2024-12-25 01:01:35,246] [pool-1-thread-10] Initializing /data/pedro/plv-test.oib: [testng] 01:01:35,246 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:01:35,246 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:01:35,247 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-25_01-01-35.log] [testng] 01:01:35,248 |-INFO in ch.qos.logback.core.sift.SiftProcessor@65a71622 - End of configuration. [testng] [2024-12-25 01:01:35,955] [pool-1-thread-9] Initializing /data/qa-17748/Image0098.oib: [testng] 01:01:35,955 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:01:35,955 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:01:35,956 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-25_01-01-35.log] [testng] 01:01:35,956 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2bf4835d - End of configuration. [testng] [2024-12-25 01:01:36,997] [pool-1-thread-8] Initializing /data/christian/20min.oif: [testng] 01:01:36,997 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:01:36,997 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:01:36,998 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-25_01-01-36.log] [testng] 01:01:36,999 |-INFO in ch.qos.logback.core.sift.SiftProcessor@8863891 - End of configuration. [testng] [2024-12-25 01:01:39,521] [pool-1-thread-7] Initializing /data/brian/Kaede15.oib: [testng] 01:01:39,521 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:01:39,521 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:01:39,522 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-25_01-01-39.log] [testng] 01:01:39,522 |-INFO in ch.qos.logback.core.sift.SiftProcessor@68b54c21 - End of configuration. [testng] [2024-12-25 01:01:40,408] [pool-1-thread-6] Initializing /data/simon/never_worked.oib: [testng] 01:01:40,408 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:01:40,408 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:01:40,408 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-25_01-01-40.log] [testng] 01:01:40,409 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1ed01331 - End of configuration. [testng] [2024-12-25 01:01:41,256] [pool-1-thread-5] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] 01:01:41,256 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:01:41,256 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:01:41,257 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-25_01-01-41.log] [testng] 01:01:41,258 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642b808a - End of configuration. [testng] [2024-12-25 01:01:41,759] [pool-1-thread-4] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] 01:01:41,759 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:01:41,760 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:01:41,760 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-25_01-01-41.log] [testng] 01:01:41,761 |-INFO in ch.qos.logback.core.sift.SiftProcessor@551a3e8a - End of configuration. [testng] [2024-12-25 01:01:44,745] [pool-1-thread-3] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] 01:01:44,745 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:01:44,745 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:01:44,746 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-25_01-01-44.log] [testng] 01:01:44,746 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2a7d87d0 - End of configuration. [testng] [2024-12-25 01:01:45,128] [pool-1-thread-2] Initializing /data/glen/Image0002.oif: [testng] 01:01:45,128 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:01:45,128 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:01:45,129 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-25_01-01-45.log] [testng] 01:01:45,130 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5dc9e566 - End of configuration. [testng] [2024-12-25 01:01:52,083] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-12-25 01:01:53,100] [pool-1-thread-11] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2024-12-25 01:01:55,316] [pool-1-thread-5] Initializing /data/molly/11OCT2.OIF: [testng] [2024-12-25 01:02:08,234] [pool-1-thread-10] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2024-12-25 01:02:08,900] [pool-1-thread-3] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2024-12-25 01:02:09,331] [pool-1-thread-6] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-12-25 01:02:10,795] [pool-1-thread-7] Initializing /data/aryeh/control_test.oib: [testng] [2024-12-25 01:02:14,086] [pool-1-thread-1] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-12-25 01:02:15,889] [pool-1-thread-12] Initializing /data/johannes/step4.bmp: [testng] [2024-12-25 01:02:18,380] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2024-12-25 01:02:19,230] [pool-1-thread-10] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2024-12-25 01:02:24,141] [pool-1-thread-9] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] [2024-12-25 01:02:26,068] [pool-1-thread-3] Initializing /data/glen/notsaturated.oib: [testng] [2024-12-25 01:02:28,004] [pool-1-thread-8] Initializing /data/glen/111407.oif: [testng] [2024-12-25 01:02:32,893] [pool-1-thread-12] Initializing /data/glen/singlesimul.oif: [testng] [2024-12-25 01:02:34,203] [pool-1-thread-3] Initializing /data/brian/lambda02nm.oib: [testng] [2024-12-25 01:02:39,478] [pool-1-thread-3] Initializing /data/yoshihito/XY.oib: [testng] [2024-12-25 01:02:43,567] [pool-1-thread-3] Initializing /data/aryeh/030408 2 1.oib: [testng] [2024-12-25 01:02:44,396] [pool-1-thread-7] Initializing /data/glen/simulstack.oif: [testng] [2024-12-25 01:02:50,481] [pool-1-thread-3] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2024-12-25 01:02:57,874] [pool-1-thread-3] Initializing /data/qa-17748/Image0079.oib: [testng] [2024-12-25 01:02:59,738] [pool-1-thread-10] Initializing /data/molly/11OCT7.OIF: [testng] [2024-12-25 01:03:12,600] [pool-1-thread-3] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2024-12-25 01:03:15,272] [pool-1-thread-12] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2024-12-25 01:03:30,827] [pool-1-thread-12] Initializing /data/yoshihito/XY.oif: [testng] [2024-12-25 01:03:53,343] [pool-1-thread-3] Initializing /data/molly/11OCT5.OIF: [testng] [2024-12-25 01:04:15,365] [pool-1-thread-12] Initializing /data/simon/used_to_work.oib: [testng] [2024-12-25 01:04:22,429] [pool-1-thread-12] Initializing /data/stefan/cytosol_03e.oib: [testng] [2024-12-25 01:04:34,191] [pool-1-thread-12] Initializing /data/molly/11OCT9.OIF: [testng] [2024-12-25 01:10:02,737] [pool-1-thread-11] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2024-12-25 01:10:06,949] [pool-1-thread-11] Initializing /data/brian/CFP-GFP2.oib: [testng] [2024-12-25 01:10:19,062] [pool-1-thread-11] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2024-12-25 01:10:23,430] [pool-1-thread-11] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-12-25 01:10:27,714] [pool-1-thread-11] Initializing /data/yasunori/series_1.oib: [testng] [2024-12-25 01:10:32,227] [pool-1-thread-11] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2024-12-25 01:10:37,787] [pool-1-thread-11] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-12-25 01:10:42,761] [pool-1-thread-11] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] [2024-12-25 01:10:47,119] [pool-1-thread-11] Initializing /data/molly/11OCT11.OIF: [testng] [2024-12-25 01:11:46,235] [pool-1-thread-9] Initializing /data/glen/seqlinestack.oib: [testng] [2024-12-25 01:11:51,819] [pool-1-thread-9] Initializing /data/michael/CELL3.oib: [testng] [2024-12-25 01:11:53,943] [pool-1-thread-6] Initializing /data/molly/11OCT3.OIF: [testng] [2024-12-25 01:13:17,117] [pool-1-thread-9] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-12-25 01:14:31,600] [pool-1-thread-9] Initializing /data/chris/missegragation-15.oib: [testng] [2024-12-25 01:14:42,552] [pool-1-thread-9] Initializing /data/glen/simulstack.oib: [testng] [2024-12-25 01:14:52,821] [pool-1-thread-9] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] [2024-12-25 01:15:03,914] [pool-1-thread-9] Initializing /data/aryeh/1h.oib: [testng] [2024-12-25 01:15:17,680] [pool-1-thread-9] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2024-12-25 01:15:51,614] [pool-1-thread-9] Initializing /data/glen/singleseqline.oib: [testng] [2024-12-25 01:16:03,474] [pool-1-thread-9] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2024-12-25 01:19:28,785] [pool-1-thread-1] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2024-12-25 01:19:42,394] [pool-1-thread-1] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-12-25 01:20:31,818] [pool-1-thread-8] Initializing /data/jae/Image0001.oib: [testng] [2024-12-25 01:20:45,809] [pool-1-thread-8] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] [2024-12-25 01:21:29,989] [pool-1-thread-7] Initializing /data/johannes/step1.bmp: [testng] [2024-12-25 01:21:34,855] [pool-1-thread-7] Initializing /data/molly/11OCT4.OIF: [testng] [2024-12-25 01:22:58,281] [pool-1-thread-8] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2024-12-25 01:23:01,642] [pool-1-thread-2] Initializing /data/brian/FLIP.oib: [testng] [2024-12-25 01:23:04,871] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-12-25 01:23:16,712] [pool-1-thread-2] Initializing /data/stefan/cytosol_08b.oif: [testng] [2024-12-25 01:23:37,735] [pool-1-thread-8] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-12-25 01:23:49,021] [pool-1-thread-8] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] [2024-12-25 01:24:02,401] [pool-1-thread-8] Initializing /data/david/Image0016.oib: [testng] [2024-12-25 01:24:13,109] [pool-1-thread-8] Initializing /data/stefan/cytosol_01a.oif: [testng] [2024-12-25 01:27:05,494] [pool-1-thread-1] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-12-25 01:27:22,712] [pool-1-thread-1] Initializing /data/marc/V0606L.oib: [testng] [2024-12-25 01:27:52,236] [pool-1-thread-1] Initializing /data/glen/singleseqline.oif: [testng] [2024-12-25 01:29:36,046] [pool-1-thread-1] Initializing /data/glen/singleseqframe.oib: [testng] [2024-12-25 01:29:42,266] [pool-1-thread-1] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2024-12-25 01:29:48,822] [pool-1-thread-1] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2024-12-25 01:30:58,152] [pool-1-thread-10] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2024-12-25 01:31:06,215] [pool-1-thread-10] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-12-25 01:31:14,998] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] [2024-12-25 01:31:27,533] [pool-1-thread-10] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-12-25 01:31:36,178] [pool-1-thread-10] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-12-25 01:31:47,069] [pool-1-thread-10] Initializing /data/glen/notsaturated.oif: [testng] [2024-12-25 01:34:23,553] [pool-1-thread-3] Initializing /data/johannes/step3.bmp: [testng] [2024-12-25 01:34:28,210] [pool-1-thread-3] Initializing /data/molly/11OCT6.OIF: [testng] [2024-12-25 01:36:21,497] [pool-1-thread-1] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2024-12-25 01:36:31,006] [pool-1-thread-1] Initializing /data/glen/singlesimul.oib: [testng] [2024-12-25 01:36:39,514] [pool-1-thread-1] Initializing /data/sten/01.oib: [testng] [2024-12-25 01:36:47,900] [pool-1-thread-1] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-12-25 01:36:56,626] [pool-1-thread-1] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-12-25 01:38:52,004] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2024-12-25 01:39:04,078] [pool-1-thread-1] Initializing /data/brian/PA-GFP-3.oib: [testng] [2024-12-25 01:39:13,612] [pool-1-thread-1] Initializing /data/glen/4205basal106072.oif: [testng] [2024-12-25 01:43:36,733] [pool-1-thread-4] Initializing /data/brian/Lambda10nm.oib: [testng] [2024-12-25 01:43:43,244] [pool-1-thread-4] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2024-12-25 01:43:44,423] [pool-1-thread-9] Initializing /data/glen/Null file/test change.oif: [testng] [2024-12-25 01:43:49,736] [pool-1-thread-4] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] [2024-12-25 01:43:55,898] [pool-1-thread-4] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2024-12-25 01:44:03,519] [pool-1-thread-4] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2024-12-25 01:44:37,591] [pool-1-thread-9] Initializing /data/david/Image0016.oif: [testng] [2024-12-25 01:45:25,821] [pool-1-thread-10] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2024-12-25 01:45:33,887] [pool-1-thread-10] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-12-25 01:45:40,489] [pool-1-thread-10] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2024-12-25 01:45:48,079] [pool-1-thread-10] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-12-25 01:45:55,011] [pool-1-thread-10] Initializing /data/karl/Image0009.oib: [testng] [2024-12-25 01:46:01,798] [pool-1-thread-10] Initializing /data/kay/IM2pg.oib: [testng] [2024-12-25 01:46:09,692] [pool-1-thread-10] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2024-12-25 01:46:17,218] [pool-1-thread-10] Initializing /data/tom/RGB-1.avi: [testng] [2024-12-25 01:46:22,040] [pool-1-thread-10] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-12-25 01:46:27,699] [pool-1-thread-10] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2024-12-25 01:46:31,680] [pool-1-thread-9] Initializing /data/molly/11OCT10.OIF: [testng] [2024-12-25 01:50:37,919] [pool-1-thread-10] Initializing /data/glen/seqlinestack.oif: [testng] [2024-12-25 01:51:38,318] [pool-1-thread-11] Initializing /data/glen/singleseqframe.oif: [testng] [2024-12-25 01:52:54,277] [pool-1-thread-11] Initializing /data/johannes/step5b.bmp: [testng] [2024-12-25 01:52:57,267] [pool-1-thread-11] Initializing /data/tom/zseries-test.oib: [testng] [2024-12-25 01:53:08,124] [pool-1-thread-11] Initializing /data/monica/Image0056.oif: [testng] [2024-12-25 01:54:20,154] [pool-1-thread-7] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-12-25 01:54:20,948] [pool-1-thread-11] Initializing /data/francesco/fGfp.c15.oib: [testng] [2024-12-25 01:54:26,455] [pool-1-thread-7] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2024-12-25 01:54:28,395] [pool-1-thread-11] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2024-12-25 01:54:34,016] [pool-1-thread-11] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-12-25 01:54:40,072] [pool-1-thread-11] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2024-12-25 01:54:46,687] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-12-25 01:54:54,400] [pool-1-thread-11] Initializing /data/johannes/step2.bmp: [testng] [2024-12-25 01:54:57,011] [pool-1-thread-11] Initializing /data/marc/V0606J.oib: [testng] [2024-12-25 01:55:15,718] [pool-1-thread-11] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-12-25 01:55:23,985] [pool-1-thread-11] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2024-12-25 01:59:05,179] [pool-1-thread-5] Initializing /data/allan/62909#1.oib: [testng] [2024-12-25 01:59:15,822] [pool-1-thread-5] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-12-25 01:59:26,848] [pool-1-thread-5] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] [2024-12-25 02:00:32,349] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-12-25 02:00:42,935] [pool-1-thread-5] Initializing /data/glen/Null file/test no change.oif: [testng] [2024-12-25 02:01:37,926] [pool-1-thread-5] Initializing /data/johannes/step4b.bmp: [testng] [2024-12-25 02:01:38,815] [pool-1-thread-11] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2024-12-25 02:01:41,192] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2024-12-25 02:01:46,954] [pool-1-thread-11] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2024-12-25 02:02:46,627] [pool-1-thread-5] Initializing /data/molly/11OCT8.OIF: [testng] [2024-12-25 02:03:05,397] [pool-1-thread-7] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-12-25 02:03:14,018] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-12-25 02:03:23,196] [pool-1-thread-7] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] 03:05:11,561 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 03:05:11,561 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:05:11,562 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-25_03-05-11.log] [testng] 03:05:11,562 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17f8e3f9 - End of configuration. [testng] 03:28:22,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 03:28:22,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:28:22,503 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-25_03-28-22.log] [testng] 03:28:22,503 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3dc8ef70 - End of configuration. [testng] 03:34:56,363 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 03:34:56,363 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:56,364 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-25_03-34-56.log] [testng] 03:34:56,365 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c09bc3d - End of configuration. [testng] 03:46:49,946 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:46:49,946 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:46:49,947 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-25_03-46-49.log] [testng] 03:46:49,947 |-INFO in ch.qos.logback.core.sift.SiftProcessor@55024328 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 175 minutes 53 seconds Finished: SUCCESS