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Started by upstream project "BIOFORMATS-test-repo" build number 298 originally caused by: Started by upstream project "Trigger" build number 320 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@9 [BIOFORMATS-test-folder@9] $ /bin/bash -xe /tmp/jenkins17266865343983507596.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 3 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_47197_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 04:28:20,039 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 04:28:20,040 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service. [testng] 04:28:20,040 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 04:28:20,041 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 04:28:20,042 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 04:28:20,042 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 04:28:20,042 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 04:28:20,042 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 04:28:20,043 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 04:28:20,043 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 04:28:20,043 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 04:28:20,044 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 04:28:20,202 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 04:28:20,202 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 04:28:20,223 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 04:28:20,223 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 04:28:20,228 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 04:28:20,228 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 04:28:20,229 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 04:28:20,229 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 04:28:20,229 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration. [testng] 04:28:20,230 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point [testng] 04:28:20,230 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 187 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-25 04:28:20,241] [main] java.version = 17.0.2 [testng] 04:28:20,245 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 04:28:20,245 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:28:20,284 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-25_04-28-20.log] [testng] 04:28:20,285 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration. [testng] [2024-12-25 04:28:20,287] [main] testng.directory = /data [testng] [2024-12-25 04:28:20,287] [main] testng.configDirectory = /config [testng] [2024-12-25 04:28:20,296] [main] testng.multiplier = 1.0 [testng] [2024-12-25 04:28:20,296] [main] testng.in-memory = false [testng] [2024-12-25 04:28:20,296] [main] testng.allow-missing = false [testng] [2024-12-25 04:28:20,297] [main] user.language = en [testng] [2024-12-25 04:28:20,297] [main] user.country = ${user.country} [testng] [2024-12-25 04:28:20,297] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-12-25 04:32:38,124] [main] ---------------------------------------- [testng] [2024-12-25 04:32:38,124] [main] Total files: 15735 [testng] [2024-12-25 04:32:38,124] [main] Scan time: 257.827 s (16 ms/file) [testng] [2024-12-25 04:32:38,124] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-25 04:36:32,194] [pool-1-thread-1] Initializing /data/converted/stephan/notok1.tif: [testng] 04:36:32,194 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 04:36:32,194 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:36:32,195 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-25_04-36-32.log] [testng] 04:36:32,195 |-INFO in ch.qos.logback.core.sift.SiftProcessor@74cce966 - End of configuration. [testng] [2024-12-25 04:36:33,540] [pool-1-thread-12] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] 04:36:33,540 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 04:36:33,540 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:36:33,541 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-25_04-36-33.log] [testng] 04:36:33,541 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2000e8d5 - End of configuration. [testng] [2024-12-25 04:36:34,816] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] 04:36:34,816 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 04:36:34,816 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:36:34,817 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-25_04-36-34.log] [testng] 04:36:34,817 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5261684c - End of configuration. [testng] [2024-12-25 04:36:35,976] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] 04:36:35,976 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 04:36:35,976 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:36:35,977 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-25_04-36-35.log] [testng] 04:36:35,977 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5826b99d - End of configuration. [testng] [2024-12-25 04:36:37,469] [pool-1-thread-9] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] 04:36:37,469 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 04:36:37,469 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:36:37,470 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-25_04-36-37.log] [testng] 04:36:37,470 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d9ce27a - End of configuration. [testng] [2024-12-25 04:36:39,713] [pool-1-thread-8] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] 04:36:39,713 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 04:36:39,713 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:36:39,714 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-25_04-36-39.log] [testng] 04:36:39,714 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2cff9634 - End of configuration. [testng] [2024-12-25 04:36:40,579] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] 04:36:40,579 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 04:36:40,579 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:36:40,580 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-25_04-36-40.log] [testng] 04:36:40,580 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37ff939c - End of configuration. [testng] [2024-12-25 04:36:41,790] [pool-1-thread-6] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] 04:36:41,790 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 04:36:41,790 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:36:41,791 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-25_04-36-41.log] [testng] 04:36:41,791 |-INFO in ch.qos.logback.core.sift.SiftProcessor@64e02fbd - End of configuration. [testng] [2024-12-25 04:36:43,050] [pool-1-thread-5] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] 04:36:43,051 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 04:36:43,051 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:36:43,051 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-25_04-36-43.log] [testng] 04:36:43,052 |-INFO in ch.qos.logback.core.sift.SiftProcessor@860b984 - End of configuration. [testng] [2024-12-25 04:36:44,380] [pool-1-thread-4] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] 04:36:44,380 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 04:36:44,380 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:36:44,380 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-25_04-36-44.log] [testng] 04:36:44,381 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1a5e8923 - End of configuration. [testng] [2024-12-25 04:36:46,027] [pool-1-thread-3] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] 04:36:46,028 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 04:36:46,028 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:36:46,028 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-25_04-36-46.log] [testng] 04:36:46,028 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5dd6ce2c - End of configuration. [testng] [2024-12-25 04:36:47,518] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] 04:36:47,518 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 04:36:47,518 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:36:47,518 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-25_04-36-47.log] [testng] 04:36:47,519 |-INFO in ch.qos.logback.core.sift.SiftProcessor@31025931 - End of configuration. [testng] [2024-12-25 04:37:13,396] [pool-1-thread-12] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2024-12-25 04:37:23,770] [pool-1-thread-4] Initializing /data/scott/Slide133-11.tif: [testng] [2024-12-25 04:37:25,650] [pool-1-thread-6] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2024-12-25 04:37:38,526] [pool-1-thread-8] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] [2024-12-25 04:37:48,491] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2024-12-25 04:37:54,929] [pool-1-thread-4] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2024-12-25 04:38:04,618] [pool-1-thread-6] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2024-12-25 04:38:25,458] [pool-1-thread-4] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2024-12-25 04:38:58,353] [pool-1-thread-1] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2024-12-25 04:40:08,866] [pool-1-thread-5] Initializing /data/converted/dietmar/137.tif: [testng] [2024-12-25 04:40:26,314] [pool-1-thread-6] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2024-12-25 04:41:51,031] [pool-1-thread-8] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2024-12-25 04:42:19,611] [pool-1-thread-8] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2024-12-25 04:42:49,332] [pool-1-thread-8] Initializing /data/converted/dietmar/138.tif: [testng] [2024-12-25 04:44:32,670] [pool-1-thread-11] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2024-12-25 04:44:51,546] [pool-1-thread-10] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2024-12-25 04:45:29,193] [pool-1-thread-2] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2024-12-25 04:45:45,204] [pool-1-thread-7] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] [2024-12-25 04:46:16,139] [pool-1-thread-12] Initializing /data/converted/michel/d.tif: [testng] [2024-12-25 04:46:52,439] [pool-1-thread-12] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2024-12-25 04:47:19,406] [pool-1-thread-12] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] [2024-12-25 04:47:54,337] [pool-1-thread-12] Initializing /data/converted/darren/section0002_w1.tif: [testng] [2024-12-25 04:48:29,150] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2024-12-25 04:48:45,929] [pool-1-thread-12] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2024-12-25 04:48:54,875] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2024-12-25 04:49:05,174] [pool-1-thread-3] Initializing /data/converted/converted/damian.tif: [testng] [2024-12-25 04:49:50,874] [pool-1-thread-3] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2024-12-25 04:50:03,874] [pool-1-thread-11] Initializing /data/converted/michel/e.tif: [testng] [2024-12-25 04:51:04,656] [pool-1-thread-7] Initializing /data/scott/Slide133-08.tif: [testng] [2024-12-25 04:51:47,102] [pool-1-thread-11] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2024-12-25 04:51:56,474] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2024-12-25 04:52:14,623] [pool-1-thread-1] Initializing /data/converted/stephan/notok2.tif: [testng] [2024-12-25 04:52:41,342] [pool-1-thread-8] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2024-12-25 04:53:21,484] [pool-1-thread-11] Initializing /data/converted/lior/live+cf5b.tif: [testng] [2024-12-25 04:54:37,659] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2024-12-25 04:55:24,077] [pool-1-thread-1] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2024-12-25 04:56:08,860] [pool-1-thread-8] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2024-12-25 04:56:37,711] [pool-1-thread-1] Initializing /data/scott/Slide133-01.tif: [testng] [2024-12-25 04:56:52,704] [pool-1-thread-8] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2024-12-25 04:57:19,922] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2024-12-25 04:57:30,579] [pool-1-thread-8] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2024-12-25 04:58:10,914] [pool-1-thread-12] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2024-12-25 04:58:49,744] [pool-1-thread-9] Initializing /data/converted/michel/a.tif: [testng] [2024-12-25 04:59:20,117] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2024-12-25 04:59:40,579] [pool-1-thread-10] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2024-12-25 05:00:26,870] [pool-1-thread-4] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2024-12-25 05:01:12,850] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2024-12-25 05:01:35,746] [pool-1-thread-4] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2024-12-25 05:02:33,935] [pool-1-thread-6] Initializing /data/converted/kelsey/432x342BW.tif: [testng] [2024-12-25 05:02:37,506] [pool-1-thread-7] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] [2024-12-25 05:03:18,452] [pool-1-thread-6] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2024-12-25 05:03:21,116] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2024-12-25 05:03:53,111] [pool-1-thread-6] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2024-12-25 05:04:09,841] [pool-1-thread-3] Initializing /data/converted/converted/2chz.tif: [testng] [2024-12-25 05:04:26,265] [pool-1-thread-6] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2024-12-25 05:06:10,072] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2024-12-25 05:07:43,748] [pool-1-thread-1] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] [2024-12-25 05:08:15,168] [pool-1-thread-3] Initializing /data/othmar/mozaic.tif: [testng] [2024-12-25 05:09:30,448] [pool-1-thread-4] Initializing /data/converted/othmar/z-stack.tif: [testng] [2024-12-25 05:10:14,608] [pool-1-thread-9] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] [2024-12-25 05:10:17,322] [pool-1-thread-6] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2024-12-25 05:10:51,310] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2024-12-25 05:11:22,101] [pool-1-thread-6] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2024-12-25 05:11:33,589] [pool-1-thread-7] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2024-12-25 05:11:48,473] [pool-1-thread-5] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] [2024-12-25 05:14:01,159] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2024-12-25 05:15:14,786] [pool-1-thread-10] Initializing /data/converted/converted/2chzt.tif: [testng] [2024-12-25 05:18:30,709] [pool-1-thread-11] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2024-12-25 05:22:56,822] [pool-1-thread-8] Initializing /data/converted/sebastien/F1.tif: [testng] [2024-12-25 05:23:39,066] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2024-12-25 05:28:06,187] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2024-12-25 05:28:13,395] [pool-1-thread-6] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2024-12-25 05:28:45,216] [pool-1-thread-12] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2024-12-25 05:29:18,838] [pool-1-thread-8] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2024-12-25 05:30:32,382] [pool-1-thread-8] Initializing /data/scott/Slide133-04.tif: [testng] [2024-12-25 05:31:17,834] [pool-1-thread-8] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2024-12-25 05:31:41,755] [pool-1-thread-6] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] [2024-12-25 05:32:50,481] [pool-1-thread-6] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2024-12-25 05:33:56,937] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2024-12-25 05:35:29,562] [pool-1-thread-4] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] [2024-12-25 05:37:27,158] [pool-1-thread-9] Initializing /data/converted/dan/adultnr1.tif: [testng] [2024-12-25 05:37:45,305] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2024-12-25 05:38:32,893] [pool-1-thread-8] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2024-12-25 05:39:09,589] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2024-12-25 05:42:09,251] [pool-1-thread-3] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2024-12-25 05:44:19,781] [pool-1-thread-3] Initializing /data/converted/karsten/Bild1.tif: [testng] [2024-12-25 05:45:22,965] [pool-1-thread-3] Initializing /data/converted/kelsey/650x514BW.tif: [testng] [2024-12-25 05:46:01,807] [pool-1-thread-3] Initializing /data/converted/converted/mri-stack.tif: [testng] [2024-12-25 05:46:39,555] [pool-1-thread-3] Initializing /data/converted/sebastien/test.tif: [testng] [2024-12-25 05:47:52,305] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2024-12-25 05:48:57,268] [pool-1-thread-11] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] [2024-12-25 05:50:49,482] [pool-1-thread-4] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2024-12-25 05:51:13,512] [pool-1-thread-9] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2024-12-25 05:51:27,842] [pool-1-thread-4] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2024-12-25 05:53:18,259] [pool-1-thread-5] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2024-12-25 05:55:28,095] [pool-1-thread-4] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2024-12-25 05:56:16,954] [pool-1-thread-4] Initializing /data/converted/michel/b.tif: [testng] [2024-12-25 05:57:00,112] [pool-1-thread-9] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2024-12-25 05:57:08,014] [pool-1-thread-4] Initializing /data/converted/nicolas/image.tif: [testng] [2024-12-25 05:57:42,613] [pool-1-thread-4] Initializing /data/converted/vladan/vladan.tif: [testng] [2024-12-25 05:58:26,709] [pool-1-thread-11] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2024-12-25 05:58:41,999] [pool-1-thread-11] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2024-12-25 05:58:48,522] [pool-1-thread-6] Initializing /data/converted/karsten/Bild2.tif: [testng] [2024-12-25 05:59:13,316] [pool-1-thread-3] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2024-12-25 05:59:45,635] [pool-1-thread-6] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] [2024-12-25 05:59:47,823] [pool-1-thread-3] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2024-12-25 06:00:19,401] [pool-1-thread-3] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2024-12-25 06:00:28,054] [pool-1-thread-6] Initializing /data/converted/othmar/mozaic.tif: [testng] [2024-12-25 06:00:56,876] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2024-12-25 06:03:53,588] [pool-1-thread-1] Initializing /data/converted/michel/c.tif: [testng] [2024-12-25 06:04:42,421] [pool-1-thread-1] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2024-12-25 06:05:27,769] [pool-1-thread-1] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2024-12-25 06:05:36,999] [pool-1-thread-6] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] 06:10:47,031 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 06:10:47,031 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:10:47,032 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-25_06-10-47.log] [testng] 06:10:47,032 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6ef17a06 - End of configuration. [testng] 07:05:09,945 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 07:05:09,945 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:05:09,948 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-25_07-05-09.log] [testng] 07:05:09,948 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a0d13f1 - End of configuration. [testng] 07:08:13,966 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 07:08:13,966 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:08:13,967 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-25_07-08-13.log] [testng] 07:08:13,967 |-INFO in ch.qos.logback.core.sift.SiftProcessor@445760e0 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 159 minutes 59 seconds Finished: SUCCESS