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Started by upstream project "BIOFORMATS-test-repo" build number 299 originally caused by: Started by upstream project "Trigger" build number 321 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins1970506568091959369.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_47235_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 00:22:45,480 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:22:45,481 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - No custom configurators were discovered as a service. [testng] 00:22:45,481 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:22:45,482 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:22:45,482 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:22:45,482 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:22:45,483 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:22:45,483 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:22:45,483 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:22:45,484 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:22:45,484 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:22:45,484 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:22:45,667 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:22:45,667 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:22:45,691 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:22:45,691 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:22:45,697 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:22:45,697 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:22:45,697 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:22:45,697 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:22:45,698 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@29215f06 - End of configuration. [testng] 00:22:45,698 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@b9b00e0 - Registering current configuration as safe fallback point [testng] 00:22:45,698 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 215 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-26 00:22:45,707] [main] java.version = 21 [testng] 00:22:45,710 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:22:45,710 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:45,751 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-26_00-22-45.log] [testng] 00:22:45,752 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b919693 - End of configuration. [testng] [2024-12-26 00:22:45,754] [main] testng.directory = /data [testng] [2024-12-26 00:22:45,754] [main] testng.configDirectory = /config [testng] [2024-12-26 00:22:45,763] [main] testng.multiplier = 1.0 [testng] [2024-12-26 00:22:45,763] [main] testng.in-memory = false [testng] [2024-12-26 00:22:45,764] [main] testng.allow-missing = false [testng] [2024-12-26 00:22:45,764] [main] user.language = en [testng] [2024-12-26 00:22:45,764] [main] user.country = ${user.country} [testng] [2024-12-26 00:22:45,764] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-12-26 00:22:52,240] [main] ---------------------------------------- [testng] [2024-12-26 00:22:52,240] [main] Total files: 103 [testng] [2024-12-26 00:22:52,240] [main] Scan time: 6.476 s (62 ms/file) [testng] [2024-12-26 00:22:52,240] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-26 00:23:15,176] [pool-1-thread-1] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] 00:23:15,176 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:23:15,176 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:15,178 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-26_00-23-15.log] [testng] 00:23:15,178 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f5ed56f - End of configuration. [testng] [2024-12-26 00:23:15,283] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] 00:23:15,284 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:23:15,284 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:15,285 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-26_00-23-15.log] [testng] 00:23:15,285 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7dcc820e - End of configuration. [testng] [2024-12-26 00:23:15,395] [pool-1-thread-11] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] 00:23:15,395 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:23:15,395 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:15,396 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-26_00-23-15.log] [testng] 00:23:15,396 |-INFO in ch.qos.logback.core.sift.SiftProcessor@449011d7 - End of configuration. [testng] [2024-12-26 00:23:15,519] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] 00:23:15,519 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:23:15,519 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:15,520 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-26_00-23-15.log] [testng] 00:23:15,521 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a4a3984 - End of configuration. [testng] [2024-12-26 00:23:15,627] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] 00:23:15,627 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:23:15,627 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:15,628 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-26_00-23-15.log] [testng] 00:23:15,628 |-INFO in ch.qos.logback.core.sift.SiftProcessor@32617acc - End of configuration. [testng] [2024-12-26 00:23:15,753] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] 00:23:15,753 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:23:15,753 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:15,754 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-26_00-23-15.log] [testng] 00:23:15,754 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4d901036 - End of configuration. [testng] [2024-12-26 00:23:15,875] [pool-1-thread-7] Initializing /data/jay/DMtest2.dm3: [testng] 00:23:15,876 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:23:15,876 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:15,876 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-26_00-23-15.log] [testng] 00:23:15,877 |-INFO in ch.qos.logback.core.sift.SiftProcessor@195e4f02 - End of configuration. [testng] [2024-12-26 00:23:16,168] [pool-1-thread-6] Initializing /data/chip/Nanogold-1.dm3: [testng] 00:23:16,168 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:23:16,168 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:16,169 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-26_00-23-16.log] [testng] 00:23:16,170 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2456e3da - End of configuration. [testng] [2024-12-26 00:23:16,391] [pool-1-thread-5] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] 00:23:16,391 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:23:16,392 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:16,392 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-26_00-23-16.log] [testng] 00:23:16,393 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f2cc012 - End of configuration. [testng] [2024-12-26 00:23:16,986] [pool-1-thread-4] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] 00:23:16,986 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:23:16,986 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:16,987 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-26_00-23-16.log] [testng] 00:23:16,987 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6fde1eb4 - End of configuration. [testng] [2024-12-26 00:23:17,074] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] 00:23:17,074 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:23:17,074 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:17,075 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-26_00-23-17.log] [testng] 00:23:17,075 |-INFO in ch.qos.logback.core.sift.SiftProcessor@bfa1ecc - End of configuration. [testng] [2024-12-26 00:23:17,161] [pool-1-thread-2] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] 00:23:17,162 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:23:17,162 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:17,162 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-26_00-23-17.log] [testng] 00:23:17,163 |-INFO in ch.qos.logback.core.sift.SiftProcessor@671da89c - End of configuration. [testng] [2024-12-26 00:23:20,148] [pool-1-thread-9] Initializing /data/jay/dnasample.tif: [testng] [2024-12-26 00:23:20,823] [pool-1-thread-1] Initializing /data/ofra/lowloss.dm3: [testng] [2024-12-26 00:23:21,448] [pool-1-thread-10] Initializing /data/jay/smallerfile.dm3: [testng] [2024-12-26 00:23:21,533] [pool-1-thread-3] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2024-12-26 00:23:21,619] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] [2024-12-26 00:23:22,397] [pool-1-thread-2] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2024-12-26 00:23:22,513] [pool-1-thread-1] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2024-12-26 00:23:22,650] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e4.tif: [testng] [2024-12-26 00:23:23,950] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2024-12-26 00:23:24,139] [pool-1-thread-5] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-12-26 00:23:24,357] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-12-26 00:23:24,505] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] [2024-12-26 00:23:25,235] [pool-1-thread-6] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2024-12-26 00:23:25,865] [pool-1-thread-4] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-12-26 00:23:26,765] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [2024-12-26 00:23:27,056] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] [2024-12-26 00:23:27,152] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2024-12-26 00:23:27,671] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] [2024-12-26 00:23:28,257] [pool-1-thread-2] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] [2024-12-26 00:23:28,902] [pool-1-thread-3] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-12-26 00:23:30,668] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2024-12-26 00:23:30,757] [pool-1-thread-11] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2024-12-26 00:23:30,948] [pool-1-thread-9] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-12-26 00:23:31,371] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-12-26 00:23:33,206] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2024-12-26 00:23:34,157] [pool-1-thread-9] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2024-12-26 00:23:34,845] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [2024-12-26 00:23:35,077] [pool-1-thread-3] Initializing /data/jay/recAmaghi.dm3: [testng] [2024-12-26 00:23:36,563] [pool-1-thread-2] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-12-26 00:23:36,803] [pool-1-thread-4] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] [2024-12-26 00:23:37,074] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2024-12-26 00:23:37,777] [pool-1-thread-5] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-12-26 00:23:37,869] [pool-1-thread-12] Initializing /data/qa-7642/8.dm4: [testng] [2024-12-26 00:23:39,079] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2024-12-26 00:23:39,394] [pool-1-thread-3] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2024-12-26 00:23:40,289] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-12-26 00:23:40,969] [pool-1-thread-9] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2024-12-26 00:23:41,933] [pool-1-thread-7] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-12-26 00:23:42,258] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2024-12-26 00:23:42,888] [pool-1-thread-4] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-12-26 00:23:44,257] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2024-12-26 00:23:44,636] [pool-1-thread-12] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-12-26 00:23:45,520] [pool-1-thread-3] Initializing /data/melissa/annotation-test.dm3: [testng] [2024-12-26 00:23:45,656] [pool-1-thread-8] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] [2024-12-26 00:23:46,660] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2024-12-26 00:23:47,174] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-12-26 00:23:47,590] [pool-1-thread-7] Initializing /data/jay/DMtest.dm3: [testng] [2024-12-26 00:23:47,944] [pool-1-thread-3] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-12-26 00:23:50,115] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-12-26 00:23:50,469] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] [2024-12-26 00:23:50,997] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2024-12-26 00:23:51,873] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2024-12-26 00:23:52,794] [pool-1-thread-1] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2024-12-26 00:23:54,656] [pool-1-thread-6] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2024-12-26 00:23:56,179] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-12-26 00:23:56,437] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-12-26 00:23:58,507] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2024-12-26 00:23:59,504] [pool-1-thread-5] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2024-12-26 00:23:59,917] [pool-1-thread-10] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] [2024-12-26 00:24:00,446] [pool-1-thread-11] Initializing /data/jay/ViewDMtest.dm3: [testng] [2024-12-26 00:24:01,046] [pool-1-thread-8] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2024-12-26 00:24:01,270] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2024-12-26 00:24:02,733] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-12-26 00:24:03,337] [pool-1-thread-5] Initializing /data/jay/dnasample1.dm3: [testng] [2024-12-26 00:24:03,610] [pool-1-thread-12] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] [2024-12-26 00:24:06,952] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-12-26 00:24:07,274] [pool-1-thread-3] Initializing /data/qa-21761/example.dm4: [testng] [2024-12-26 00:24:07,729] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] [2024-12-26 00:24:08,261] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2024-12-26 00:24:08,560] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-12-26 00:24:08,805] [pool-1-thread-8] Initializing /data/jay/Carbon.34.dm3: [testng] [2024-12-26 00:24:09,960] [pool-1-thread-6] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2024-12-26 00:24:10,439] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2024-12-26 00:24:10,755] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2024-12-26 00:24:11,213] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2024-12-26 00:24:12,163] [pool-1-thread-11] Initializing /data/samples/test-tiles.dm3: [testng] [2024-12-26 00:24:12,556] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] [2024-12-26 00:24:12,831] [pool-1-thread-7] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2024-12-26 00:24:13,754] [pool-1-thread-9] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-12-26 00:24:14,023] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2024-12-26 00:24:14,441] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-12-26 00:24:15,359] [pool-1-thread-8] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2024-12-26 00:24:16,899] [pool-1-thread-12] Initializing /data/jay/camtest1.dm3: [testng] [2024-12-26 00:24:17,150] [pool-1-thread-5] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-12-26 00:24:18,625] [pool-1-thread-4] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2024-12-26 00:24:20,013] [pool-1-thread-10] Initializing /data/melissa/annotation-test.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 50 seconds Finished: SUCCESS