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Started by upstream project "BIOFORMATS-test-repo" build number 300 originally caused by: Started by upstream project "Trigger" build number 322 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@9 [BIOFORMATS-test-folder@9] $ /bin/bash -xe /tmp/jenkins10134151577760114247.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_47440_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 00:50:54,917 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:50:54,919 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service. [testng] 00:50:54,919 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:50:54,920 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:50:54,920 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:50:54,920 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:50:54,921 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:50:54,921 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:50:54,921 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:50:54,921 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:50:54,922 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:50:54,922 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:50:55,155 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:50:55,155 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:50:55,183 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:50:55,183 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:50:55,191 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:50:55,191 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:50:55,191 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:50:55,192 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:50:55,192 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration. [testng] 00:50:55,193 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point [testng] 00:50:55,193 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 272 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-27 00:50:55,203] [main] java.version = 1.8.0_342 [testng] 00:50:55,206 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:50:55,206 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:50:55,251 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-27_00-50-55.log] [testng] 00:50:55,253 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-12-27 00:50:55,255] [main] testng.directory = /data [testng] [2024-12-27 00:50:55,255] [main] testng.configDirectory = /config [testng] [2024-12-27 00:50:55,267] [main] testng.multiplier = 1.0 [testng] [2024-12-27 00:50:55,267] [main] testng.in-memory = false [testng] [2024-12-27 00:50:55,268] [main] testng.allow-missing = false [testng] [2024-12-27 00:50:55,268] [main] user.language = en [testng] [2024-12-27 00:50:55,268] [main] user.country = ${user.country} [testng] [2024-12-27 00:50:55,268] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-12-27 00:51:23,058] [main] ---------------------------------------- [testng] [2024-12-27 00:51:23,058] [main] Total files: 259 [testng] [2024-12-27 00:51:23,059] [main] Scan time: 27.79 s (107 ms/file) [testng] [2024-12-27 00:51:23,059] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-27 00:59:29,581] [pool-1-thread-1] Initializing /data/johannes/step4b.bmp: [testng] 00:59:29,581 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:59:29,581 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:59:29,582 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-27_00-59-29.log] [testng] 00:59:29,583 |-INFO in ch.qos.logback.core.sift.SiftProcessor@73127ddd - End of configuration. [testng] [2024-12-27 00:59:29,640] [pool-1-thread-12] Initializing /data/qa-17748/Image0098.oib: [testng] 00:59:29,640 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:59:29,640 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:59:29,641 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-27_00-59-29.log] [testng] 00:59:29,642 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14a624 - End of configuration. [testng] [2024-12-27 00:59:29,918] [pool-1-thread-11] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] 00:59:29,918 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:59:29,918 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:59:29,919 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-27_00-59-29.log] [testng] 00:59:29,919 |-INFO in ch.qos.logback.core.sift.SiftProcessor@713b511c - End of configuration. [testng] [2024-12-27 00:59:30,499] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] 00:59:30,499 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:59:30,499 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:59:30,500 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-27_00-59-30.log] [testng] 00:59:30,500 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30706035 - End of configuration. [testng] [2024-12-27 00:59:31,038] [pool-1-thread-9] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] 00:59:31,038 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:59:31,038 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:59:31,038 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-27_00-59-31.log] [testng] 00:59:31,039 |-INFO in ch.qos.logback.core.sift.SiftProcessor@900e2f5 - End of configuration. [testng] [2024-12-27 00:59:31,515] [pool-1-thread-8] Initializing /data/glen/singlesimul.oif: [testng] 00:59:31,515 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:59:31,515 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:59:31,516 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-27_00-59-31.log] [testng] 00:59:31,517 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3bd21b97 - End of configuration. [testng] [2024-12-27 00:59:31,947] [pool-1-thread-7] Initializing /data/molly/11OCT11.OIF: [testng] 00:59:31,948 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:59:31,948 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:59:31,948 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-27_00-59-31.log] [testng] 00:59:31,949 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ee763bb - End of configuration. [testng] [2024-12-27 00:59:39,195] [pool-1-thread-6] Initializing /data/brian/CFP-GFP2.oib: [testng] 00:59:39,195 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:59:39,195 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:59:39,196 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-27_00-59-39.log] [testng] 00:59:39,196 |-INFO in ch.qos.logback.core.sift.SiftProcessor@514b484d - End of configuration. [testng] [2024-12-27 00:59:39,615] [pool-1-thread-5] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] 00:59:39,615 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:59:39,616 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:59:39,616 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-27_00-59-39.log] [testng] 00:59:39,616 |-INFO in ch.qos.logback.core.sift.SiftProcessor@177358a8 - End of configuration. [testng] [2024-12-27 00:59:39,913] [pool-1-thread-4] Initializing /data/molly/11OCT2.OIF: [testng] 00:59:39,913 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:59:39,913 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:59:39,914 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-27_00-59-39.log] [testng] 00:59:39,914 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c30af60 - End of configuration. [testng] [2024-12-27 00:59:52,779] [pool-1-thread-3] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] 00:59:52,779 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:59:52,779 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:59:52,780 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-27_00-59-52.log] [testng] 00:59:52,780 |-INFO in ch.qos.logback.core.sift.SiftProcessor@226ef4ef - End of configuration. [testng] [2024-12-27 00:59:53,269] [pool-1-thread-2] Initializing /data/stefan/cytosol_08b.oif: [testng] 00:59:53,269 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:59:53,269 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:59:53,270 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-27_00-59-53.log] [testng] 00:59:53,270 |-INFO in ch.qos.logback.core.sift.SiftProcessor@20db5778 - End of configuration. [testng] [2024-12-27 00:59:59,357] [pool-1-thread-1] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2024-12-27 01:00:01,022] [pool-1-thread-12] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2024-12-27 01:00:01,644] [pool-1-thread-5] Initializing /data/glen/notsaturated.oib: [testng] [2024-12-27 01:00:02,433] [pool-1-thread-6] Initializing /data/johannes/step5b.bmp: [testng] [2024-12-27 01:00:03,109] [pool-1-thread-10] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2024-12-27 01:00:03,524] [pool-1-thread-9] Initializing /data/johannes/step3.bmp: [testng] [2024-12-27 01:00:03,690] [pool-1-thread-11] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2024-12-27 01:00:05,508] [pool-1-thread-6] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-12-27 01:00:06,444] [pool-1-thread-1] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2024-12-27 01:00:07,310] [pool-1-thread-12] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-12-27 01:00:08,238] [pool-1-thread-9] Initializing /data/molly/11OCT10.OIF: [testng] [2024-12-27 01:00:20,816] [pool-1-thread-10] Initializing /data/glen/notsaturated.oif: [testng] [2024-12-27 01:00:22,292] [pool-1-thread-5] Initializing /data/molly/11OCT3.OIF: [testng] [2024-12-27 01:01:03,687] [pool-1-thread-11] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2024-12-27 01:01:12,759] [pool-1-thread-6] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-12-27 01:01:14,285] [pool-1-thread-1] Initializing /data/glen/simulstack.oif: [testng] [2024-12-27 01:01:17,817] [pool-1-thread-12] Initializing /data/aryeh/1h.oib: [testng] [2024-12-27 01:01:22,740] [pool-1-thread-6] Initializing /data/molly/11OCT8.OIF: [testng] [2024-12-27 01:01:37,405] [pool-1-thread-12] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2024-12-27 01:01:39,966] [pool-1-thread-3] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2024-12-27 01:01:44,081] [pool-1-thread-8] Initializing /data/christian/20min.oif: [testng] [2024-12-27 01:01:53,458] [pool-1-thread-12] Initializing /data/brian/Lambda10nm.oib: [testng] [2024-12-27 01:02:00,410] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2024-12-27 01:02:08,629] [pool-1-thread-12] Initializing /data/david/Image0016.oib: [testng] [2024-12-27 01:02:15,602] [pool-1-thread-12] Initializing /data/glen/singleseqline.oif: [testng] [2024-12-27 01:02:17,686] [pool-1-thread-3] Initializing /data/glen/simulstack.oib: [testng] [2024-12-27 01:02:19,879] [pool-1-thread-8] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2024-12-27 01:02:37,384] [pool-1-thread-3] Initializing /data/chris/missegragation-15.oib: [testng] [2024-12-27 01:02:39,114] [pool-1-thread-8] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2024-12-27 01:02:44,494] [pool-1-thread-3] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2024-12-27 01:02:46,320] [pool-1-thread-8] Initializing /data/glen/111407.oif: [testng] [2024-12-27 01:02:56,014] [pool-1-thread-3] Initializing /data/glen/seqlinestack.oif: [testng] [2024-12-27 01:03:33,440] [pool-1-thread-12] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2024-12-27 01:05:54,897] [pool-1-thread-11] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2024-12-27 01:05:57,067] [pool-1-thread-11] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2024-12-27 01:06:05,677] [pool-1-thread-11] Initializing /data/kay/IM2pg.oib: [testng] [2024-12-27 01:06:13,140] [pool-1-thread-11] Initializing /data/glen/4205basal106072.oif: [testng] [2024-12-27 01:12:39,844] [pool-1-thread-10] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2024-12-27 01:16:44,778] [pool-1-thread-10] Initializing /data/sten/01.oib: [testng] [2024-12-27 01:16:52,660] [pool-1-thread-10] Initializing /data/david/Image0016.oif: [testng] [2024-12-27 01:19:58,879] [pool-1-thread-10] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-12-27 01:20:11,441] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-12-27 01:20:23,716] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] [2024-12-27 01:20:36,280] [pool-1-thread-10] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2024-12-27 01:20:39,397] [pool-1-thread-10] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] [2024-12-27 01:20:49,704] [pool-1-thread-10] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-12-27 01:21:00,328] [pool-1-thread-10] Initializing /data/molly/11OCT9.OIF: [testng] [2024-12-27 01:25:09,478] [pool-1-thread-1] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] [2024-12-27 01:25:19,288] [pool-1-thread-1] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-12-27 01:26:49,731] [pool-1-thread-8] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-12-27 01:27:04,634] [pool-1-thread-8] Initializing /data/michael/CELL3.oib: [testng] [2024-12-27 01:27:11,761] [pool-1-thread-8] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-12-27 01:27:29,444] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-12-27 01:27:40,426] [pool-1-thread-8] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2024-12-27 01:27:50,131] [pool-1-thread-8] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] [2024-12-27 01:37:47,007] [pool-1-thread-7] Initializing /data/brian/PA-GFP-3.oib: [testng] [2024-12-27 01:37:52,112] [pool-1-thread-6] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-12-27 01:37:57,969] [pool-1-thread-7] Initializing /data/johannes/step4.bmp: [testng] [2024-12-27 01:38:01,014] [pool-1-thread-7] Initializing /data/molly/11OCT7.OIF: [testng] [2024-12-27 01:38:50,616] [pool-1-thread-12] Initializing /data/francesco/fGfp.c15.oib: [testng] [2024-12-27 01:38:57,868] [pool-1-thread-12] Initializing /data/simon/never_worked.oib: [testng] [2024-12-27 01:39:03,943] [pool-1-thread-12] Initializing /data/yasunori/series_1.oib: [testng] [2024-12-27 01:39:10,172] [pool-1-thread-12] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-12-27 01:39:14,194] [pool-1-thread-6] Initializing /data/glen/singleseqframe.oif: [testng] [2024-12-27 01:39:15,483] [pool-1-thread-2] Initializing /data/molly/11OCT6.OIF: [testng] [2024-12-27 01:40:59,559] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2024-12-27 01:41:12,027] [pool-1-thread-6] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-12-27 01:41:22,254] [pool-1-thread-6] Initializing /data/allan/62909#1.oib: [testng] [2024-12-27 01:41:28,996] [pool-1-thread-6] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2024-12-27 01:41:38,847] [pool-1-thread-6] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] [2024-12-27 01:41:48,952] [pool-1-thread-6] Initializing /data/brian/lambda02nm.oib: [testng] [2024-12-27 01:41:57,304] [pool-1-thread-6] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-12-27 01:42:56,756] [pool-1-thread-6] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2024-12-27 01:44:56,445] [pool-1-thread-3] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-12-27 01:45:03,556] [pool-1-thread-8] Initializing /data/karl/Image0009.oib: [testng] [2024-12-27 01:45:09,475] [pool-1-thread-3] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2024-12-27 01:45:12,294] [pool-1-thread-8] Initializing /data/molly/11OCT5.OIF: [testng] [2024-12-27 01:45:36,739] [pool-1-thread-9] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2024-12-27 01:45:42,432] [pool-1-thread-3] Initializing /data/monica/Image0056.oif: [testng] [2024-12-27 01:45:45,662] [pool-1-thread-9] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2024-12-27 01:46:54,204] [pool-1-thread-3] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2024-12-27 01:47:03,120] [pool-1-thread-6] Initializing /data/yoshihito/XY.oif: [testng] [2024-12-27 01:47:05,668] [pool-1-thread-3] Initializing /data/glen/singleseqframe.oib: [testng] [2024-12-27 01:47:14,302] [pool-1-thread-3] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] [2024-12-27 01:48:17,786] [pool-1-thread-6] Initializing /data/yoshihito/XY.oib: [testng] [2024-12-27 01:48:25,522] [pool-1-thread-6] Initializing /data/glen/Null file/test change.oif: [testng] [2024-12-27 01:48:42,917] [pool-1-thread-11] Initializing /data/aryeh/control_test.oib: [testng] [2024-12-27 01:49:09,217] [pool-1-thread-6] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-12-27 01:49:14,898] [pool-1-thread-11] Initializing /data/tom/zseries-test.oib: [testng] [2024-12-27 01:49:27,445] [pool-1-thread-11] Initializing /data/simon/used_to_work.oib: [testng] [2024-12-27 01:49:35,577] [pool-1-thread-11] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-12-27 01:49:44,401] [pool-1-thread-11] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-12-27 01:49:48,877] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-12-27 01:49:53,344] [pool-1-thread-11] Initializing /data/molly/11OCT4.OIF: [testng] [2024-12-27 01:50:36,007] [pool-1-thread-1] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] [2024-12-27 01:51:49,195] [pool-1-thread-1] Initializing /data/glen/Null file/test no change.oif: [testng] [2024-12-27 01:53:04,684] [pool-1-thread-1] Initializing /data/marc/V0606L.oib: [testng] [2024-12-27 01:53:28,349] [pool-1-thread-1] Initializing /data/glen/seqlinestack.oib: [testng] [2024-12-27 01:53:38,158] [pool-1-thread-1] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-12-27 01:53:46,860] [pool-1-thread-1] Initializing /data/marc/V0606J.oib: [testng] [2024-12-27 01:54:02,445] [pool-1-thread-6] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2024-12-27 01:54:07,821] [pool-1-thread-1] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2024-12-27 01:54:11,038] [pool-1-thread-6] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-12-27 01:54:17,031] [pool-1-thread-1] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2024-12-27 01:55:25,550] [pool-1-thread-6] Initializing /data/glen/Image0002.oif: [testng] [2024-12-27 01:57:25,872] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-12-27 01:57:35,075] [pool-1-thread-12] Initializing /data/pedro/plv-test.oib: [testng] [2024-12-27 01:57:42,267] [pool-1-thread-12] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2024-12-27 01:58:00,926] [pool-1-thread-12] Initializing /data/stefan/yc2_live-03.oib: [testng] [2024-12-27 01:58:12,588] [pool-1-thread-12] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-12-27 01:58:22,306] [pool-1-thread-12] Initializing /data/brian/FLIP.oib: [testng] [2024-12-27 01:58:32,005] [pool-1-thread-12] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-12-27 01:58:41,106] [pool-1-thread-12] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2024-12-27 01:59:48,322] [pool-1-thread-4] Initializing /data/tom/RGB-1.avi: [testng] [2024-12-27 01:59:52,780] [pool-1-thread-4] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2024-12-27 01:59:59,657] [pool-1-thread-4] Initializing /data/jae/Image0001.oib: [testng] [2024-12-27 02:00:01,638] [pool-1-thread-9] Initializing /data/johannes/step1.bmp: [testng] [2024-12-27 02:00:04,840] [pool-1-thread-9] Initializing /data/johannes/step2.bmp: [testng] [2024-12-27 02:00:07,970] [pool-1-thread-9] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2024-12-27 02:00:09,342] [pool-1-thread-4] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2024-12-27 02:01:05,664] [pool-1-thread-9] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2024-12-27 02:01:17,002] [pool-1-thread-9] Initializing /data/stefan/cytosol_01a.oif: [testng] [2024-12-27 02:07:20,076] [pool-1-thread-4] Initializing /data/stefan/cytosol_03e.oib: [testng] [2024-12-27 02:07:23,855] [pool-1-thread-7] Initializing /data/brian/Kaede15.oib: [testng] [2024-12-27 02:07:33,761] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-12-27 02:07:37,693] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2024-12-27 02:07:50,570] [pool-1-thread-7] Initializing /data/glen/singlesimul.oib: [testng] [2024-12-27 02:07:52,977] [pool-1-thread-4] Initializing /data/glen/singleseqline.oib: [testng] [2024-12-27 02:07:58,607] [pool-1-thread-7] Initializing /data/qa-17748/Image0079.oib: [testng] [2024-12-27 02:08:00,293] [pool-1-thread-4] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-12-27 02:08:08,779] [pool-1-thread-7] Initializing /data/aryeh/030408 2 1.oib: [testng] [2024-12-27 02:08:11,482] [pool-1-thread-4] Initializing /data/aryeh/1h_after_pdt.oib: [testng] 02:53:54,904 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:53:54,904 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:53:54,905 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-27_02-53-54.log] [testng] 02:53:54,906 |-INFO in ch.qos.logback.core.sift.SiftProcessor@38be500f - End of configuration. [testng] 03:24:23,925 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 03:24:23,926 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:24:23,928 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-27_03-24-23.log] [testng] 03:24:23,929 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f3e6bd8 - End of configuration. [testng] 03:57:13,186 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 03:57:13,186 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:57:13,189 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-27_03-57-13.log] [testng] 03:57:13,189 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4454e90e - End of configuration. [testng] 04:04:35,632 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 04:04:35,632 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:04:35,632 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-27_04-04-35.log] [testng] 04:04:35,633 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3ececd11 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 193 minutes 45 seconds Finished: SUCCESS