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Started by upstream project "BIOFORMATS-test-repo" build number 302 originally caused by: Started by upstream project "Trigger" build number 324 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@9 [BIOFORMATS-test-folder@9] $ /bin/bash -xe /tmp/jenkins655337027262495417.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_47770_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 00:54:25,101 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:54:25,102 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service. [testng] 00:54:25,102 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:54:25,103 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:54:25,104 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:54:25,104 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:54:25,104 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:54:25,104 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:54:25,105 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:54:25,105 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:54:25,105 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:54:25,106 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:54:25,263 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:54:25,263 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:54:25,285 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:54:25,286 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:54:25,291 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:54:25,291 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:54:25,291 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:54:25,292 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:54:25,292 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration. [testng] 00:54:25,293 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point [testng] 00:54:25,293 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 188 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-29 00:54:25,302] [main] java.version = 17.0.2 [testng] 00:54:25,305 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:54:25,305 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:54:25,345 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-29_00-54-25.log] [testng] 00:54:25,347 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration. [testng] [2024-12-29 00:54:25,348] [main] testng.directory = /data [testng] [2024-12-29 00:54:25,349] [main] testng.configDirectory = /config [testng] [2024-12-29 00:54:25,357] [main] testng.multiplier = 1.0 [testng] [2024-12-29 00:54:25,358] [main] testng.in-memory = false [testng] [2024-12-29 00:54:25,358] [main] testng.allow-missing = false [testng] [2024-12-29 00:54:25,358] [main] user.language = en [testng] [2024-12-29 00:54:25,358] [main] user.country = ${user.country} [testng] [2024-12-29 00:54:25,358] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-12-29 00:55:09,795] [main] ---------------------------------------- [testng] [2024-12-29 00:55:09,795] [main] Total files: 259 [testng] [2024-12-29 00:55:09,795] [main] Scan time: 44.437 s (171 ms/file) [testng] [2024-12-29 00:55:09,796] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-29 01:06:01,532] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] 01:06:01,533 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:06:01,533 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:06:01,534 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-29_01-06-01.log] [testng] 01:06:01,535 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d180fc - End of configuration. [testng] [2024-12-29 01:06:02,183] [pool-1-thread-12] Initializing /data/stefan/yc2_live-03.oib: [testng] 01:06:02,183 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:06:02,183 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:06:02,185 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-29_01-06-02.log] [testng] 01:06:02,185 |-INFO in ch.qos.logback.core.sift.SiftProcessor@521e5250 - End of configuration. [testng] [2024-12-29 01:06:03,207] [pool-1-thread-11] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] 01:06:03,207 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:06:03,207 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:06:03,208 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-29_01-06-03.log] [testng] 01:06:03,208 |-INFO in ch.qos.logback.core.sift.SiftProcessor@65a71622 - End of configuration. [testng] [2024-12-29 01:06:03,476] [pool-1-thread-10] Initializing /data/pedro/plv-test.oib: [testng] 01:06:03,476 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:06:03,476 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:06:03,477 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-29_01-06-03.log] [testng] 01:06:03,477 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2bf4835d - End of configuration. [testng] [2024-12-29 01:06:03,915] [pool-1-thread-9] Initializing /data/qa-17748/Image0098.oib: [testng] 01:06:03,915 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:06:03,915 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:06:03,916 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-29_01-06-03.log] [testng] 01:06:03,917 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4352a7fc - End of configuration. [testng] [2024-12-29 01:06:04,630] [pool-1-thread-8] Initializing /data/christian/20min.oif: [testng] 01:06:04,630 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:06:04,630 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:06:04,631 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-29_01-06-04.log] [testng] 01:06:04,631 |-INFO in ch.qos.logback.core.sift.SiftProcessor@68b54c21 - End of configuration. [testng] [2024-12-29 01:06:05,379] [pool-1-thread-7] Initializing /data/brian/Kaede15.oib: [testng] 01:06:05,379 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:06:05,379 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:06:05,380 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-29_01-06-05.log] [testng] 01:06:05,381 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1ed01331 - End of configuration. [testng] [2024-12-29 01:06:06,200] [pool-1-thread-6] Initializing /data/simon/never_worked.oib: [testng] 01:06:06,200 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:06:06,200 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:06:06,201 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-29_01-06-06.log] [testng] 01:06:06,201 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642b808a - End of configuration. [testng] [2024-12-29 01:06:06,642] [pool-1-thread-5] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] 01:06:06,642 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:06:06,642 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:06:06,643 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-29_01-06-06.log] [testng] 01:06:06,643 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f0a77d9 - End of configuration. [testng] [2024-12-29 01:06:07,154] [pool-1-thread-4] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] 01:06:07,154 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:06:07,154 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:06:07,155 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-29_01-06-07.log] [testng] 01:06:07,155 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2a7d87d0 - End of configuration. [testng] [2024-12-29 01:06:12,519] [pool-1-thread-3] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] 01:06:12,519 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:06:12,520 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:06:12,520 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-29_01-06-12.log] [testng] 01:06:12,521 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5dc9e566 - End of configuration. [testng] [2024-12-29 01:06:12,919] [pool-1-thread-2] Initializing /data/glen/Image0002.oif: [testng] 01:06:12,919 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:06:12,919 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:06:12,920 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-29_01-06-12.log] [testng] 01:06:12,920 |-INFO in ch.qos.logback.core.sift.SiftProcessor@44b7b736 - End of configuration. [testng] [2024-12-29 01:06:22,802] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-12-29 01:06:23,701] [pool-1-thread-9] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-12-29 01:06:26,105] [pool-1-thread-10] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2024-12-29 01:06:26,648] [pool-1-thread-6] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2024-12-29 01:06:28,442] [pool-1-thread-5] Initializing /data/molly/11OCT2.OIF: [testng] [2024-12-29 01:06:48,390] [pool-1-thread-3] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2024-12-29 01:06:49,014] [pool-1-thread-1] Initializing /data/aryeh/control_test.oib: [testng] [2024-12-29 01:06:52,402] [pool-1-thread-7] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-12-29 01:07:00,224] [pool-1-thread-12] Initializing /data/johannes/step4.bmp: [testng] [2024-12-29 01:07:04,574] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2024-12-29 01:07:06,943] [pool-1-thread-10] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2024-12-29 01:07:11,824] [pool-1-thread-3] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] [2024-12-29 01:07:16,606] [pool-1-thread-11] Initializing /data/glen/notsaturated.oib: [testng] [2024-12-29 01:07:21,881] [pool-1-thread-8] Initializing /data/glen/111407.oif: [testng] [2024-12-29 01:07:25,668] [pool-1-thread-12] Initializing /data/glen/singlesimul.oif: [testng] [2024-12-29 01:07:27,763] [pool-1-thread-11] Initializing /data/brian/lambda02nm.oib: [testng] [2024-12-29 01:07:34,869] [pool-1-thread-11] Initializing /data/yoshihito/XY.oib: [testng] [2024-12-29 01:07:35,984] [pool-1-thread-1] Initializing /data/aryeh/030408 2 1.oib: [testng] [2024-12-29 01:07:42,158] [pool-1-thread-11] Initializing /data/glen/simulstack.oif: [testng] [2024-12-29 01:07:48,047] [pool-1-thread-1] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2024-12-29 01:07:55,044] [pool-1-thread-10] Initializing /data/qa-17748/Image0079.oib: [testng] [2024-12-29 01:07:56,503] [pool-1-thread-1] Initializing /data/molly/11OCT7.OIF: [testng] [2024-12-29 01:08:20,476] [pool-1-thread-10] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2024-12-29 01:08:48,765] [pool-1-thread-12] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2024-12-29 01:09:05,228] [pool-1-thread-12] Initializing /data/yoshihito/XY.oif: [testng] [2024-12-29 01:09:07,350] [pool-1-thread-10] Initializing /data/molly/11OCT5.OIF: [testng] [2024-12-29 01:09:47,686] [pool-1-thread-12] Initializing /data/simon/used_to_work.oib: [testng] [2024-12-29 01:09:54,700] [pool-1-thread-12] Initializing /data/stefan/cytosol_03e.oib: [testng] [2024-12-29 01:10:03,300] [pool-1-thread-12] Initializing /data/molly/11OCT9.OIF: [testng] [2024-12-29 01:16:22,466] [pool-1-thread-6] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2024-12-29 01:16:27,066] [pool-1-thread-6] Initializing /data/brian/CFP-GFP2.oib: [testng] [2024-12-29 01:16:32,648] [pool-1-thread-6] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2024-12-29 01:16:37,189] [pool-1-thread-6] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-12-29 01:16:43,856] [pool-1-thread-6] Initializing /data/yasunori/series_1.oib: [testng] [2024-12-29 01:16:55,554] [pool-1-thread-6] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2024-12-29 01:17:03,664] [pool-1-thread-6] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-12-29 01:17:13,890] [pool-1-thread-6] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] [2024-12-29 01:17:19,363] [pool-1-thread-6] Initializing /data/molly/11OCT11.OIF: [testng] [2024-12-29 01:19:21,427] [pool-1-thread-3] Initializing /data/glen/seqlinestack.oib: [testng] [2024-12-29 01:19:29,949] [pool-1-thread-3] Initializing /data/michael/CELL3.oib: [testng] [2024-12-29 01:19:36,568] [pool-1-thread-3] Initializing /data/molly/11OCT3.OIF: [testng] [2024-12-29 01:21:22,942] [pool-1-thread-7] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-12-29 01:23:00,795] [pool-1-thread-7] Initializing /data/chris/missegragation-15.oib: [testng] [2024-12-29 01:23:13,399] [pool-1-thread-7] Initializing /data/glen/simulstack.oib: [testng] [2024-12-29 01:23:27,577] [pool-1-thread-7] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] [2024-12-29 01:23:46,428] [pool-1-thread-7] Initializing /data/aryeh/1h.oib: [testng] [2024-12-29 01:24:05,333] [pool-1-thread-7] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2024-12-29 01:24:41,461] [pool-1-thread-7] Initializing /data/glen/singleseqline.oib: [testng] [2024-12-29 01:24:56,349] [pool-1-thread-7] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2024-12-29 01:29:17,577] [pool-1-thread-9] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2024-12-29 01:29:28,749] [pool-1-thread-9] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-12-29 01:29:33,133] [pool-1-thread-8] Initializing /data/jae/Image0001.oib: [testng] [2024-12-29 01:30:04,391] [pool-1-thread-8] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] [2024-12-29 01:30:50,116] [pool-1-thread-11] Initializing /data/johannes/step1.bmp: [testng] [2024-12-29 01:30:54,674] [pool-1-thread-11] Initializing /data/molly/11OCT4.OIF: [testng] [2024-12-29 01:32:16,631] [pool-1-thread-8] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2024-12-29 01:32:20,188] [pool-1-thread-8] Initializing /data/brian/FLIP.oib: [testng] [2024-12-29 01:32:32,369] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-12-29 01:32:44,287] [pool-1-thread-2] Initializing /data/stefan/cytosol_08b.oif: [testng] [2024-12-29 01:32:57,831] [pool-1-thread-8] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-12-29 01:33:07,916] [pool-1-thread-8] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] [2024-12-29 01:33:18,136] [pool-1-thread-8] Initializing /data/david/Image0016.oib: [testng] [2024-12-29 01:33:28,245] [pool-1-thread-8] Initializing /data/stefan/cytosol_01a.oif: [testng] [2024-12-29 01:36:18,005] [pool-1-thread-9] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-12-29 01:36:34,143] [pool-1-thread-9] Initializing /data/marc/V0606L.oib: [testng] [2024-12-29 01:37:01,617] [pool-1-thread-9] Initializing /data/glen/singleseqline.oif: [testng] [2024-12-29 01:38:33,394] [pool-1-thread-9] Initializing /data/glen/singleseqframe.oib: [testng] [2024-12-29 01:38:40,691] [pool-1-thread-9] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2024-12-29 01:38:50,725] [pool-1-thread-9] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2024-12-29 01:39:54,145] [pool-1-thread-1] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2024-12-29 01:40:02,215] [pool-1-thread-1] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-12-29 01:40:09,494] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] [2024-12-29 01:40:18,849] [pool-1-thread-1] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-12-29 01:40:25,454] [pool-1-thread-1] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-12-29 01:40:34,592] [pool-1-thread-1] Initializing /data/glen/notsaturated.oif: [testng] [2024-12-29 01:43:03,335] [pool-1-thread-10] Initializing /data/johannes/step3.bmp: [testng] [2024-12-29 01:43:09,006] [pool-1-thread-10] Initializing /data/molly/11OCT6.OIF: [testng] [2024-12-29 01:45:46,252] [pool-1-thread-9] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2024-12-29 01:45:54,664] [pool-1-thread-9] Initializing /data/glen/singlesimul.oib: [testng] [2024-12-29 01:46:04,358] [pool-1-thread-9] Initializing /data/sten/01.oib: [testng] [2024-12-29 01:46:19,347] [pool-1-thread-9] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-12-29 01:46:27,490] [pool-1-thread-9] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-12-29 01:48:29,280] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2024-12-29 01:48:40,445] [pool-1-thread-9] Initializing /data/brian/PA-GFP-3.oib: [testng] [2024-12-29 01:48:52,257] [pool-1-thread-9] Initializing /data/glen/4205basal106072.oif: [testng] [2024-12-29 01:53:51,248] [pool-1-thread-4] Initializing /data/brian/Lambda10nm.oib: [testng] [2024-12-29 01:53:54,331] [pool-1-thread-7] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2024-12-29 01:53:56,667] [pool-1-thread-4] Initializing /data/glen/Null file/test change.oif: [testng] [2024-12-29 01:54:01,939] [pool-1-thread-7] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] [2024-12-29 01:54:06,894] [pool-1-thread-7] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2024-12-29 01:54:12,850] [pool-1-thread-7] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2024-12-29 01:54:43,337] [pool-1-thread-4] Initializing /data/david/Image0016.oif: [testng] [2024-12-29 01:55:15,565] [pool-1-thread-1] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2024-12-29 01:55:23,051] [pool-1-thread-1] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-12-29 01:55:30,115] [pool-1-thread-1] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2024-12-29 01:55:38,399] [pool-1-thread-1] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-12-29 01:55:47,237] [pool-1-thread-1] Initializing /data/karl/Image0009.oib: [testng] [2024-12-29 01:55:54,249] [pool-1-thread-1] Initializing /data/kay/IM2pg.oib: [testng] [2024-12-29 01:56:02,203] [pool-1-thread-1] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2024-12-29 01:56:09,149] [pool-1-thread-1] Initializing /data/tom/RGB-1.avi: [testng] [2024-12-29 01:56:13,572] [pool-1-thread-1] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-12-29 01:56:19,990] [pool-1-thread-1] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2024-12-29 01:56:35,457] [pool-1-thread-4] Initializing /data/molly/11OCT10.OIF: [testng] [2024-12-29 02:01:00,423] [pool-1-thread-1] Initializing /data/glen/seqlinestack.oif: [testng] [2024-12-29 02:02:22,371] [pool-1-thread-6] Initializing /data/glen/singleseqframe.oif: [testng] [2024-12-29 02:03:44,408] [pool-1-thread-6] Initializing /data/johannes/step5b.bmp: [testng] [2024-12-29 02:03:47,896] [pool-1-thread-6] Initializing /data/tom/zseries-test.oib: [testng] [2024-12-29 02:03:59,616] [pool-1-thread-6] Initializing /data/monica/Image0056.oif: [testng] [2024-12-29 02:04:55,908] [pool-1-thread-11] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-12-29 02:05:02,740] [pool-1-thread-11] Initializing /data/francesco/fGfp.c15.oib: [testng] [2024-12-29 02:05:11,018] [pool-1-thread-11] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2024-12-29 02:05:21,056] [pool-1-thread-6] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2024-12-29 02:05:31,372] [pool-1-thread-6] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-12-29 02:05:40,250] [pool-1-thread-6] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2024-12-29 02:05:50,761] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-12-29 02:06:02,990] [pool-1-thread-6] Initializing /data/johannes/step2.bmp: [testng] [2024-12-29 02:06:07,231] [pool-1-thread-6] Initializing /data/marc/V0606J.oib: [testng] [2024-12-29 02:06:29,697] [pool-1-thread-6] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-12-29 02:06:43,244] [pool-1-thread-6] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2024-12-29 02:10:12,353] [pool-1-thread-5] Initializing /data/allan/62909#1.oib: [testng] [2024-12-29 02:10:23,836] [pool-1-thread-5] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-12-29 02:10:35,535] [pool-1-thread-5] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] [2024-12-29 02:11:40,876] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-12-29 02:11:50,790] [pool-1-thread-5] Initializing /data/glen/Null file/test no change.oif: [testng] [2024-12-29 02:12:39,872] [pool-1-thread-6] Initializing /data/johannes/step4b.bmp: [testng] [2024-12-29 02:12:43,050] [pool-1-thread-6] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2024-12-29 02:12:46,701] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2024-12-29 02:12:51,934] [pool-1-thread-6] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2024-12-29 02:13:56,466] [pool-1-thread-5] Initializing /data/molly/11OCT8.OIF: [testng] [2024-12-29 02:14:24,671] [pool-1-thread-11] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-12-29 02:14:34,965] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-12-29 02:14:44,705] [pool-1-thread-11] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] 03:22:40,178 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 03:22:40,178 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:22:40,179 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-29_03-22-40.log] [testng] 03:22:40,180 |-INFO in ch.qos.logback.core.sift.SiftProcessor@26279746 - End of configuration. [testng] 03:45:21,348 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 03:45:21,348 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:45:21,350 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-29_03-45-21.log] [testng] 03:45:21,350 |-INFO in ch.qos.logback.core.sift.SiftProcessor@929614b - End of configuration. [testng] 03:52:00,146 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 03:52:00,146 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:52:00,147 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-29_03-52-00.log] [testng] 03:52:00,148 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7418ed43 - End of configuration. [testng] 04:03:43,644 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 04:03:43,644 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:03:43,645 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-29_04-03-43.log] [testng] 04:03:43,645 |-INFO in ch.qos.logback.core.sift.SiftProcessor@55024328 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 189 minutes 24 seconds Finished: SUCCESS