![[Jenkins]](/jenkins/static/d8ca237c/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 303 originally caused by: Started by upstream project "Trigger" build number 325 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins3367925284444960313.sh + '[' targa = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_47931_merge_ci -v /uod/idr/repos/curated/targa:/data -v /uod/idr-scratch/merge-ci/curated/targa:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 00:46:36,194 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:46:36,196 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service. [testng] 00:46:36,196 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:46:36,197 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:46:36,197 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:46:36,198 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:46:36,198 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:46:36,198 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:46:36,198 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:46:36,199 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:46:36,199 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:46:36,199 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:46:36,451 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:46:36,451 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:46:36,480 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:46:36,481 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:46:36,489 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:46:36,490 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:46:36,490 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:46:36,490 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:46:36,490 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration. [testng] 00:46:36,491 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point [testng] 00:46:36,491 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 293 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-30 00:46:36,502] [main] java.version = 1.8.0_342 [testng] 00:46:36,505 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:46:36,505 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:36,553 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-30_00-46-36.log] [testng] 00:46:36,554 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-12-30 00:46:36,556] [main] testng.directory = /data [testng] [2024-12-30 00:46:36,557] [main] testng.configDirectory = /config [testng] [2024-12-30 00:46:36,569] [main] testng.multiplier = 1.0 [testng] [2024-12-30 00:46:36,570] [main] testng.in-memory = false [testng] [2024-12-30 00:46:36,570] [main] testng.allow-missing = false [testng] [2024-12-30 00:46:36,570] [main] user.language = fr [testng] [2024-12-30 00:46:36,570] [main] user.country = FR [testng] [2024-12-30 00:46:36,570] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-12-30 00:46:37,105] [main] ---------------------------------------- [testng] [2024-12-30 00:46:37,105] [main] Total files: 21 [testng] [2024-12-30 00:46:37,105] [main] Scan time: 0.535 s (25 ms/file) [testng] [2024-12-30 00:46:37,105] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 21 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-30 00:46:48,751] [pool-1-thread-1] Initializing /data/samples/FLAG_T16.TGA: [testng] 00:46:48,752 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:46:48,752 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:48,753 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-30_00-46-48.log] [testng] 00:46:48,753 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7fe481d3 - End of configuration. [testng] [2024-12-30 00:46:49,508] [pool-1-thread-12] Initializing /data/samples/CTC16.TGA: [testng] 00:46:49,508 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:46:49,508 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:49,509 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-30_00-46-49.log] [testng] 00:46:49,509 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c64a71a - End of configuration. [testng] [2024-12-30 00:46:50,127] [pool-1-thread-11] Initializing /data/samples/FLAG_T32.TGA: [testng] 00:46:50,127 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:46:50,127 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:50,128 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-30_00-46-50.log] [testng] 00:46:50,128 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2603c0ea - End of configuration. [testng] [2024-12-30 00:46:52,272] [pool-1-thread-10] Initializing /data/samples/UTC32.TGA: [testng] 00:46:52,272 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:46:52,272 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:52,272 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-30_00-46-52.log] [testng] 00:46:52,273 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7fd3d5e1 - End of configuration. [testng] [2024-12-30 00:46:53,500] [pool-1-thread-9] Initializing /data/samples/CBW8.TGA: [testng] 00:46:53,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:46:53,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:53,501 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-30_00-46-53.log] [testng] 00:46:53,502 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6981f452 - End of configuration. [testng] [2024-12-30 00:46:54,094] [pool-1-thread-8] Initializing /data/samples/FLAG_B16.TGA: [testng] 00:46:54,094 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:46:54,094 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:54,095 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-30_00-46-54.log] [testng] 00:46:54,095 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6fe83ad2 - End of configuration. [testng] [2024-12-30 00:46:54,762] [pool-1-thread-7] Initializing /data/samples/FLAG_B32.TGA: [testng] 00:46:54,763 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:46:54,763 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:54,763 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-30_00-46-54.log] [testng] 00:46:54,764 |-INFO in ch.qos.logback.core.sift.SiftProcessor@718ac8e5 - End of configuration. [testng] [2024-12-30 00:46:55,393] [pool-1-thread-6] Initializing /data/samples/XING_B16.TGA: [testng] 00:46:55,393 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:46:55,394 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:55,394 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-30_00-46-55.log] [testng] 00:46:55,395 |-INFO in ch.qos.logback.core.sift.SiftProcessor@16fd7289 - End of configuration. [testng] [2024-12-30 00:46:55,923] [pool-1-thread-5] Initializing /data/samples/XING_B32.TGA: [testng] 00:46:55,923 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:46:55,923 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:55,923 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-30_00-46-55.log] [testng] 00:46:55,924 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d2cc31f - End of configuration. [testng] [2024-12-30 00:46:56,323] [pool-1-thread-4] Initializing /data/samples/XING_B24.TGA: [testng] 00:46:56,323 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:46:56,323 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:56,324 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-30_00-46-56.log] [testng] 00:46:56,325 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e5071e7 - End of configuration. [testng] [2024-12-30 00:46:56,658] [pool-1-thread-3] Initializing /data/samples/CTC24.TGA: [testng] 00:46:56,658 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:46:56,658 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:56,659 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-30_00-46-56.log] [testng] 00:46:56,659 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3916efee - End of configuration. [testng] [2024-12-30 00:46:56,950] [pool-1-thread-2] Initializing /data/samples/XING_T24.TGA: [testng] 00:46:56,950 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:46:56,950 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:56,951 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-30_00-46-56.log] [testng] 00:46:56,951 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1a1349ad - End of configuration. [testng] [2024-12-30 00:47:03,175] [pool-1-thread-1] Initializing /data/samples/CCM8.TGA: [testng] [2024-12-30 00:47:03,504] [pool-1-thread-5] Initializing /data/samples/XING_T32.TGA: [testng] [2024-12-30 00:47:03,804] [pool-1-thread-4] Initializing /data/samples/UTC24.TGA: [testng] [2024-12-30 00:47:04,176] [pool-1-thread-8] Initializing /data/samples/UTC16.TGA: [testng] [2024-12-30 00:47:04,645] [pool-1-thread-12] Initializing /data/samples/XING_T16.TGA: [testng] [2024-12-30 00:47:05,041] [pool-1-thread-11] Initializing /data/samples/UBW8.TGA: [testng] [2024-12-30 00:47:05,452] [pool-1-thread-2] Initializing /data/samples/MARBLES.TGA: [testng] [2024-12-30 00:47:05,852] [pool-1-thread-6] Initializing /data/samples/UCM8.TGA: [testng] [2024-12-30 00:47:06,286] [pool-1-thread-7] Initializing /data/samples/FLAG_B24.TGA: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 1113, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 37 seconds Finished: SUCCESS