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Started by upstream project "BIOFORMATS-test-repo" build number 304 originally caused by: Started by upstream project "Trigger" build number 326 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins2246912438735729359.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_48100_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 01:04:55,577 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:04:55,578 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service. [testng] 01:04:55,578 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:04:55,579 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:04:55,580 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:04:55,580 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:04:55,580 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:04:55,580 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:04:55,581 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:04:55,581 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:04:55,581 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:04:55,582 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:04:55,743 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:04:55,743 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:04:55,764 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:04:55,765 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:04:55,770 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:04:55,770 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:04:55,770 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:04:55,771 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:04:55,771 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration. [testng] 01:04:55,772 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point [testng] 01:04:55,772 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 191 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-31 01:04:55,782] [main] java.version = 11.0.16 [testng] 01:04:55,786 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:04:55,786 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:04:55,838 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-31_01-04-55.log] [testng] 01:04:55,840 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2024-12-31 01:04:55,843] [main] testng.directory = /data [testng] [2024-12-31 01:04:55,843] [main] testng.configDirectory = /config [testng] [2024-12-31 01:04:55,856] [main] testng.multiplier = 1.0 [testng] [2024-12-31 01:04:55,857] [main] testng.in-memory = false [testng] [2024-12-31 01:04:55,857] [main] testng.allow-missing = false [testng] [2024-12-31 01:04:55,857] [main] user.language = en [testng] [2024-12-31 01:04:55,857] [main] user.country = ${user.country} [testng] [2024-12-31 01:04:55,858] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-12-31 01:05:31,763] [main] ---------------------------------------- [testng] [2024-12-31 01:05:31,763] [main] Total files: 259 [testng] [2024-12-31 01:05:31,763] [main] Scan time: 35.905 s (138 ms/file) [testng] [2024-12-31 01:05:31,763] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-31 01:15:33,007] [pool-1-thread-1] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] 01:15:33,007 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:15:33,008 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:15:33,010 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-31_01-15-33.log] [testng] 01:15:33,010 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13797157 - End of configuration. [testng] [2024-12-31 01:15:33,496] [pool-1-thread-12] Initializing /data/glen/singleseqline.oif: [testng] 01:15:33,497 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:15:33,497 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:15:33,497 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-31_01-15-33.log] [testng] 01:15:33,498 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1991c92e - End of configuration. [testng] [2024-12-31 01:15:34,086] [pool-1-thread-11] Initializing /data/molly/11OCT5.OIF: [testng] 01:15:34,086 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:15:34,086 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:15:34,087 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-31_01-15-34.log] [testng] 01:15:34,087 |-INFO in ch.qos.logback.core.sift.SiftProcessor@637c9eff - End of configuration. [testng] [2024-12-31 01:15:40,923] [pool-1-thread-10] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] 01:15:40,923 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:15:40,923 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:15:40,924 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-31_01-15-40.log] [testng] 01:15:40,925 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5305c501 - End of configuration. [testng] [2024-12-31 01:15:42,326] [pool-1-thread-9] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] 01:15:42,326 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:15:42,326 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:15:42,327 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-31_01-15-42.log] [testng] 01:15:42,328 |-INFO in ch.qos.logback.core.sift.SiftProcessor@789cbae1 - End of configuration. [testng] [2024-12-31 01:15:42,398] [pool-1-thread-8] Initializing /data/johannes/step2.bmp: [testng] 01:15:42,399 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:15:42,399 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:15:42,399 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-31_01-15-42.log] [testng] 01:15:42,400 |-INFO in ch.qos.logback.core.sift.SiftProcessor@602b60dd - End of configuration. [testng] [2024-12-31 01:15:42,470] [pool-1-thread-7] Initializing /data/aryeh/1h_after_pdt.oib: [testng] 01:15:42,470 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:15:42,470 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:15:42,471 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-31_01-15-42.log] [testng] 01:15:42,471 |-INFO in ch.qos.logback.core.sift.SiftProcessor@31e7a4ff - End of configuration. [testng] [2024-12-31 01:15:44,988] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] 01:15:44,988 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:15:44,988 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:15:44,989 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-31_01-15-44.log] [testng] 01:15:44,989 |-INFO in ch.qos.logback.core.sift.SiftProcessor@23acec7d - End of configuration. [testng] [2024-12-31 01:15:45,471] [pool-1-thread-5] Initializing /data/marc/V0606J.oib: [testng] 01:15:45,471 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:15:45,471 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:15:45,472 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-31_01-15-45.log] [testng] 01:15:45,472 |-INFO in ch.qos.logback.core.sift.SiftProcessor@24e05804 - End of configuration. [testng] [2024-12-31 01:15:46,799] [pool-1-thread-4] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] 01:15:46,800 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:15:46,800 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:15:46,800 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-31_01-15-46.log] [testng] 01:15:46,801 |-INFO in ch.qos.logback.core.sift.SiftProcessor@26b5f256 - End of configuration. [testng] [2024-12-31 01:15:47,049] [pool-1-thread-3] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] 01:15:47,049 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:15:47,049 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:15:47,050 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-31_01-15-47.log] [testng] 01:15:47,050 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3239c3fc - End of configuration. [testng] [2024-12-31 01:15:50,542] [pool-1-thread-2] Initializing /data/brian/FLIP.oib: [testng] 01:15:50,542 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:15:50,542 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:15:50,542 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-31_01-15-50.log] [testng] 01:15:50,543 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17045d19 - End of configuration. [testng] [2024-12-31 01:15:53,524] [pool-1-thread-9] Initializing /data/glen/notsaturated.oib: [testng] [2024-12-31 01:15:54,667] [pool-1-thread-8] Initializing /data/michael/CELL3.oib: [testng] [2024-12-31 01:15:56,401] [pool-1-thread-4] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-12-31 01:15:57,113] [pool-1-thread-1] Initializing /data/glen/Null file/test change.oif: [testng] [2024-12-31 01:15:58,902] [pool-1-thread-6] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] [2024-12-31 01:15:59,649] [pool-1-thread-2] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-12-31 01:16:02,395] [pool-1-thread-9] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-12-31 01:16:03,753] [pool-1-thread-8] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-12-31 01:16:05,160] [pool-1-thread-4] Initializing /data/christian/20min.oif: [testng] [2024-12-31 01:16:07,788] [pool-1-thread-9] Initializing /data/simon/used_to_work.oib: [testng] [2024-12-31 01:16:08,488] [pool-1-thread-8] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2024-12-31 01:16:09,004] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-12-31 01:16:10,277] [pool-1-thread-5] Initializing /data/qa-17748/Image0079.oib: [testng] [2024-12-31 01:16:12,546] [pool-1-thread-7] Initializing /data/monica/Image0056.oif: [testng] [2024-12-31 01:16:14,932] [pool-1-thread-8] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-12-31 01:16:15,741] [pool-1-thread-5] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2024-12-31 01:16:16,273] [pool-1-thread-9] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-12-31 01:16:17,037] [pool-1-thread-6] Initializing /data/johannes/step1.bmp: [testng] [2024-12-31 01:16:20,331] [pool-1-thread-6] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] [2024-12-31 01:16:21,720] [pool-1-thread-3] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-12-31 01:16:24,444] [pool-1-thread-5] Initializing /data/molly/11OCT4.OIF: [testng] [2024-12-31 01:16:34,093] [pool-1-thread-9] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2024-12-31 01:16:34,602] [pool-1-thread-8] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-12-31 01:16:38,008] [pool-1-thread-4] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-12-31 01:16:39,050] [pool-1-thread-6] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2024-12-31 01:16:46,317] [pool-1-thread-3] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-12-31 01:16:47,654] [pool-1-thread-1] Initializing /data/marc/V0606L.oib: [testng] [2024-12-31 01:16:49,342] [pool-1-thread-12] Initializing /data/molly/11OCT2.OIF: [testng] [2024-12-31 01:17:12,018] [pool-1-thread-9] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-12-31 01:17:13,659] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-12-31 01:17:16,532] [pool-1-thread-7] Initializing /data/molly/11OCT10.OIF: [testng] [2024-12-31 01:17:38,517] [pool-1-thread-3] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] [2024-12-31 01:17:39,865] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2024-12-31 01:17:42,679] [pool-1-thread-8] Initializing /data/stefan/cytosol_08b.oif: [testng] [2024-12-31 01:17:49,355] [pool-1-thread-4] Initializing /data/glen/seqlinestack.oib: [testng] [2024-12-31 01:17:52,666] [pool-1-thread-3] Initializing /data/glen/singleseqline.oib: [testng] [2024-12-31 01:17:53,263] [pool-1-thread-9] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] [2024-12-31 01:17:53,892] [pool-1-thread-1] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-12-31 01:17:56,422] [pool-1-thread-4] Initializing /data/glen/singleseqframe.oib: [testng] [2024-12-31 01:17:58,043] [pool-1-thread-3] Initializing /data/glen/singlesimul.oib: [testng] [2024-12-31 01:17:58,972] [pool-1-thread-9] Initializing /data/kay/IM2pg.oib: [testng] [2024-12-31 01:18:01,682] [pool-1-thread-1] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2024-12-31 01:18:02,294] [pool-1-thread-4] Initializing /data/aryeh/1h.oib: [testng] [2024-12-31 01:18:03,643] [pool-1-thread-3] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-12-31 01:18:06,029] [pool-1-thread-9] Initializing /data/stefan/cytosol_03e.oib: [testng] [2024-12-31 01:18:08,663] [pool-1-thread-1] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2024-12-31 01:18:11,092] [pool-1-thread-3] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2024-12-31 01:18:12,661] [pool-1-thread-4] Initializing /data/brian/CFP-GFP2.oib: [testng] [2024-12-31 01:18:15,884] [pool-1-thread-9] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-12-31 01:18:17,471] [pool-1-thread-3] Initializing /data/johannes/step5b.bmp: [testng] [2024-12-31 01:18:18,539] [pool-1-thread-4] Initializing /data/johannes/step3.bmp: [testng] [2024-12-31 01:18:19,862] [pool-1-thread-3] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-12-31 01:18:21,655] [pool-1-thread-4] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2024-12-31 01:18:22,424] [pool-1-thread-9] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2024-12-31 01:18:29,128] [pool-1-thread-3] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2024-12-31 01:18:32,360] [pool-1-thread-4] Initializing /data/glen/singlesimul.oif: [testng] [2024-12-31 01:19:21,339] [pool-1-thread-4] Initializing /data/glen/4205basal106072.oif: [testng] [2024-12-31 01:20:34,605] [pool-1-thread-1] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2024-12-31 01:20:39,234] [pool-1-thread-1] Initializing /data/molly/11OCT3.OIF: [testng] [2024-12-31 01:21:51,803] [pool-1-thread-3] Initializing /data/molly/11OCT7.OIF: [testng] [2024-12-31 01:25:28,897] [pool-1-thread-10] Initializing /data/aryeh/control_test.oib: [testng] [2024-12-31 01:25:55,162] [pool-1-thread-10] Initializing /data/molly/11OCT11.OIF: [testng] [2024-12-31 01:26:46,642] [pool-1-thread-2] Initializing /data/yoshihito/XY.oib: [testng] [2024-12-31 01:26:59,560] [pool-1-thread-2] Initializing /data/glen/simulstack.oif: [testng] [2024-12-31 01:39:34,424] [pool-1-thread-9] Initializing /data/brian/lambda02nm.oib: [testng] [2024-12-31 01:39:51,686] [pool-1-thread-9] Initializing /data/brian/PA-GFP-3.oib: [testng] [2024-12-31 01:40:03,163] [pool-1-thread-9] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2024-12-31 01:44:37,736] [pool-1-thread-11] Initializing /data/johannes/step4.bmp: [testng] [2024-12-31 01:44:41,655] [pool-1-thread-11] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2024-12-31 01:44:50,742] [pool-1-thread-11] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2024-12-31 01:45:08,813] [pool-1-thread-5] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-12-31 01:45:22,637] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] [2024-12-31 01:45:35,993] [pool-1-thread-5] Initializing /data/brian/Kaede15.oib: [testng] [2024-12-31 01:45:49,417] [pool-1-thread-5] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-12-31 01:47:54,469] [pool-1-thread-5] Initializing /data/jae/Image0001.oib: [testng] [2024-12-31 01:48:05,175] [pool-1-thread-5] Initializing /data/chris/missegragation-15.oib: [testng] [2024-12-31 01:48:14,959] [pool-1-thread-5] Initializing /data/molly/11OCT6.OIF: [testng] [2024-12-31 01:50:15,302] [pool-1-thread-6] Initializing /data/david/Image0016.oif: [testng] [2024-12-31 01:52:08,044] [pool-1-thread-11] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2024-12-31 01:52:16,157] [pool-1-thread-11] Initializing /data/stefan/yc2_live-03.oib: [testng] [2024-12-31 01:52:24,246] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2024-12-31 01:52:28,181] [pool-1-thread-11] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-12-31 01:52:33,581] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-12-31 01:52:36,179] [pool-1-thread-11] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2024-12-31 01:52:44,412] [pool-1-thread-6] Initializing /data/pedro/plv-test.oib: [testng] [2024-12-31 01:52:52,159] [pool-1-thread-6] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] [2024-12-31 01:53:00,259] [pool-1-thread-6] Initializing /data/johannes/step4b.bmp: [testng] [2024-12-31 01:53:03,545] [pool-1-thread-6] Initializing /data/tom/RGB-1.avi: [testng] [2024-12-31 01:53:08,309] [pool-1-thread-6] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-12-31 01:55:00,941] [pool-1-thread-9] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-12-31 01:55:08,856] [pool-1-thread-9] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2024-12-31 01:55:18,224] [pool-1-thread-9] Initializing /data/david/Image0016.oib: [testng] [2024-12-31 01:55:19,513] [pool-1-thread-2] Initializing /data/tom/zseries-test.oib: [testng] [2024-12-31 01:55:23,662] [pool-1-thread-3] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2024-12-31 01:56:33,263] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-12-31 01:56:36,294] [pool-1-thread-2] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2024-12-31 01:56:41,245] [pool-1-thread-9] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2024-12-31 01:56:42,230] [pool-1-thread-11] Initializing /data/glen/notsaturated.oif: [testng] [2024-12-31 01:56:45,712] [pool-1-thread-2] Initializing /data/yasunori/series_1.oib: [testng] [2024-12-31 01:56:52,434] [pool-1-thread-2] Initializing /data/yoshihito/XY.oif: [testng] [2024-12-31 01:57:05,242] [pool-1-thread-8] Initializing /data/molly/11OCT8.OIF: [testng] [2024-12-31 01:57:35,471] [pool-1-thread-2] Initializing /data/francesco/fGfp.c15.oib: [testng] [2024-12-31 01:57:41,548] [pool-1-thread-2] Initializing /data/glen/singleseqframe.oif: [testng] [2024-12-31 01:57:42,728] [pool-1-thread-9] Initializing /data/brian/Lambda10nm.oib: [testng] [2024-12-31 01:57:49,301] [pool-1-thread-9] Initializing /data/sten/01.oib: [testng] [2024-12-31 01:57:56,581] [pool-1-thread-9] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-12-31 01:58:50,060] [pool-1-thread-4] Initializing /data/simon/never_worked.oib: [testng] [2024-12-31 01:58:51,088] [pool-1-thread-2] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2024-12-31 01:58:58,170] [pool-1-thread-4] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2024-12-31 01:59:00,911] [pool-1-thread-2] Initializing /data/stefan/cytosol_01a.oif: [testng] [2024-12-31 02:00:44,192] [pool-1-thread-4] Initializing /data/molly/11OCT9.OIF: [testng] [2024-12-31 02:02:30,369] [pool-1-thread-7] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2024-12-31 02:02:32,770] [pool-1-thread-7] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] [2024-12-31 02:02:42,803] [pool-1-thread-9] Initializing /data/allan/62909#1.oib: [testng] [2024-12-31 02:02:48,293] [pool-1-thread-9] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] [2024-12-31 02:03:40,752] [pool-1-thread-7] Initializing /data/glen/Image0002.oif: [testng] [2024-12-31 02:07:38,383] [pool-1-thread-10] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2024-12-31 02:07:46,062] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-12-31 02:07:55,875] [pool-1-thread-10] Initializing /data/glen/seqlinestack.oif: [testng] [2024-12-31 02:11:00,882] [pool-1-thread-11] Initializing /data/qa-17748/Image0098.oib: [testng] [2024-12-31 02:11:11,265] [pool-1-thread-11] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] [2024-12-31 02:12:15,393] [pool-1-thread-11] Initializing /data/glen/simulstack.oib: [testng] [2024-12-31 02:12:21,799] [pool-1-thread-11] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2024-12-31 02:12:28,038] [pool-1-thread-11] Initializing /data/aryeh/030408 2 1.oib: [testng] [2024-12-31 02:12:34,399] [pool-1-thread-11] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2024-12-31 02:12:41,499] [pool-1-thread-11] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2024-12-31 02:12:47,674] [pool-1-thread-11] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2024-12-31 02:13:04,938] [pool-1-thread-11] Initializing /data/glen/Null file/test no change.oif: [testng] [2024-12-31 02:13:42,156] [pool-1-thread-12] Initializing /data/karl/Image0009.oib: [testng] [2024-12-31 02:13:45,480] [pool-1-thread-11] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2024-12-31 02:13:47,947] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2024-12-31 02:13:52,537] [pool-1-thread-11] Initializing /data/glen/111407.oif: [testng] 03:08:02,708 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 03:08:02,709 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:08:02,710 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-31_03-08-02.log] [testng] 03:08:02,710 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6de8e554 - End of configuration. [testng] 03:23:03,224 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 03:23:03,224 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:23:03,226 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-31_03-23-03.log] [testng] 03:23:03,226 |-INFO in ch.qos.logback.core.sift.SiftProcessor@446f0e55 - End of configuration. [testng] 03:54:55,007 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 03:54:55,007 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:54:55,008 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-31_03-54-55.log] [testng] 03:54:55,008 |-INFO in ch.qos.logback.core.sift.SiftProcessor@27f6d73a - End of configuration. [testng] 04:03:32,920 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 04:03:32,920 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:03:32,921 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-31_04-03-32.log] [testng] 04:03:32,922 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6801b4a4 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 178 minutes 40 seconds Finished: SUCCESS