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Started by upstream project "BIOFORMATS-test-repo" build number 306 originally caused by: Started by upstream project "Trigger" build number 328 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins3536167925677056955.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_48390_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 00:35:43,807 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:35:43,808 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - No custom configurators were discovered as a service. [testng] 00:35:43,808 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:35:43,809 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:35:43,810 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:35:43,810 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:35:43,810 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:35:43,810 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:35:43,811 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:35:43,811 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:35:43,812 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:35:43,812 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:35:43,983 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:35:43,983 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:35:44,010 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:35:44,010 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:35:44,017 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:35:44,017 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:35:44,018 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:35:44,018 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:35:44,018 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@29215f06 - End of configuration. [testng] 00:35:44,019 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@b9b00e0 - Registering current configuration as safe fallback point [testng] 00:35:44,019 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 208 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-01-02 00:35:44,028] [main] java.version = 21 [testng] 00:35:44,032 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:35:44,032 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:35:44,077 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-01-02_00-35-44.log] [testng] 00:35:44,079 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b919693 - End of configuration. [testng] [2025-01-02 00:35:44,081] [main] testng.directory = /data [testng] [2025-01-02 00:35:44,081] [main] testng.configDirectory = /config [testng] [2025-01-02 00:35:44,090] [main] testng.multiplier = 1.0 [testng] [2025-01-02 00:35:44,091] [main] testng.in-memory = false [testng] [2025-01-02 00:35:44,091] [main] testng.allow-missing = false [testng] [2025-01-02 00:35:44,091] [main] user.language = en [testng] [2025-01-02 00:35:44,091] [main] user.country = ${user.country} [testng] [2025-01-02 00:35:44,091] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2025-01-02 00:35:48,584] [main] ---------------------------------------- [testng] [2025-01-02 00:35:48,584] [main] Total files: 103 [testng] [2025-01-02 00:35:48,584] [main] Scan time: 4.493 s (43 ms/file) [testng] [2025-01-02 00:35:48,585] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-01-02 00:36:03,755] [pool-1-thread-1] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] 00:36:03,756 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:36:03,756 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:36:03,757 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-01-02_00-36-03.log] [testng] 00:36:03,758 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5df418cd - End of configuration. [testng] [2025-01-02 00:36:03,852] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] 00:36:03,852 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:36:03,853 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:36:03,854 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-01-02_00-36-03.log] [testng] 00:36:03,854 |-INFO in ch.qos.logback.core.sift.SiftProcessor@40d66b88 - End of configuration. [testng] [2025-01-02 00:36:03,915] [pool-1-thread-11] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] 00:36:03,915 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:36:03,916 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:36:03,917 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-01-02_00-36-03.log] [testng] 00:36:03,918 |-INFO in ch.qos.logback.core.sift.SiftProcessor@e5a9999 - End of configuration. [testng] [2025-01-02 00:36:04,040] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] 00:36:04,041 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:36:04,041 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:36:04,042 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-01-02_00-36-04.log] [testng] 00:36:04,043 |-INFO in ch.qos.logback.core.sift.SiftProcessor@75a1b654 - End of configuration. [testng] [2025-01-02 00:36:04,099] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] 00:36:04,099 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:36:04,100 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:36:04,100 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-01-02_00-36-04.log] [testng] 00:36:04,101 |-INFO in ch.qos.logback.core.sift.SiftProcessor@11a05dff - End of configuration. [testng] [2025-01-02 00:36:04,174] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] 00:36:04,174 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:36:04,174 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:36:04,176 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-01-02_00-36-04.log] [testng] 00:36:04,176 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a4a3984 - End of configuration. [testng] [2025-01-02 00:36:04,334] [pool-1-thread-7] Initializing /data/jay/DMtest2.dm3: [testng] 00:36:04,334 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:36:04,335 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:36:04,336 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-01-02_00-36-04.log] [testng] 00:36:04,336 |-INFO in ch.qos.logback.core.sift.SiftProcessor@16bb8175 - End of configuration. [testng] [2025-01-02 00:36:04,413] [pool-1-thread-6] Initializing /data/chip/Nanogold-1.dm3: [testng] 00:36:04,414 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:36:04,414 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:36:04,414 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-01-02_00-36-04.log] [testng] 00:36:04,415 |-INFO in ch.qos.logback.core.sift.SiftProcessor@78fb0b04 - End of configuration. [testng] [2025-01-02 00:36:04,647] [pool-1-thread-5] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] 00:36:04,648 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:36:04,648 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:36:04,649 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-01-02_00-36-04.log] [testng] 00:36:04,649 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5130cd07 - End of configuration. [testng] [2025-01-02 00:36:05,175] [pool-1-thread-4] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] 00:36:05,176 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:36:05,176 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:36:05,177 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-01-02_00-36-05.log] [testng] 00:36:05,177 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5771f461 - End of configuration. [testng] [2025-01-02 00:36:05,241] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] 00:36:05,242 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:36:05,242 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:36:05,243 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-01-02_00-36-05.log] [testng] 00:36:05,243 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2456e3da - End of configuration. [testng] [2025-01-02 00:36:05,340] [pool-1-thread-2] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] 00:36:05,341 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:36:05,341 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:36:05,342 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-01-02_00-36-05.log] [testng] 00:36:05,342 |-INFO in ch.qos.logback.core.sift.SiftProcessor@78cda41f - End of configuration. [testng] [2025-01-02 00:36:07,907] [pool-1-thread-9] Initializing /data/jay/dnasample.tif: [testng] [2025-01-02 00:36:09,183] [pool-1-thread-1] Initializing /data/ofra/lowloss.dm3: [testng] [2025-01-02 00:36:09,827] [pool-1-thread-10] Initializing /data/jay/smallerfile.dm3: [testng] [2025-01-02 00:36:09,945] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] [2025-01-02 00:36:10,182] [pool-1-thread-3] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2025-01-02 00:36:10,355] [pool-1-thread-5] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2025-01-02 00:36:10,548] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e4.tif: [testng] [2025-01-02 00:36:11,401] [pool-1-thread-8] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2025-01-02 00:36:12,089] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2025-01-02 00:36:12,773] [pool-1-thread-1] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2025-01-02 00:36:13,201] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2025-01-02 00:36:13,390] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] [2025-01-02 00:36:13,563] [pool-1-thread-3] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2025-01-02 00:36:14,130] [pool-1-thread-10] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2025-01-02 00:36:15,726] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [2025-01-02 00:36:15,984] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] [2025-01-02 00:36:16,130] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2025-01-02 00:36:16,704] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] [2025-01-02 00:36:18,191] [pool-1-thread-5] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] [2025-01-02 00:36:18,446] [pool-1-thread-8] Initializing /data/jay/graphitedm3.dm3: [testng] [2025-01-02 00:36:20,331] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2025-01-02 00:36:20,513] [pool-1-thread-9] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2025-01-02 00:36:20,672] [pool-1-thread-3] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2025-01-02 00:36:21,091] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2025-01-02 00:36:22,840] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2025-01-02 00:36:24,233] [pool-1-thread-3] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2025-01-02 00:36:25,475] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [2025-01-02 00:36:25,982] [pool-1-thread-5] Initializing /data/jay/recAmaghi.dm3: [testng] [2025-01-02 00:36:26,246] [pool-1-thread-8] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2025-01-02 00:36:27,808] [pool-1-thread-12] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] [2025-01-02 00:36:29,485] [pool-1-thread-9] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2025-01-02 00:36:30,407] [pool-1-thread-10] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2025-01-02 00:36:30,682] [pool-1-thread-1] Initializing /data/qa-7642/8.dm4: [testng] [2025-01-02 00:36:31,066] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2025-01-02 00:36:31,723] [pool-1-thread-12] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2025-01-02 00:36:32,668] [pool-1-thread-10] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2025-01-02 00:36:34,726] [pool-1-thread-5] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2025-01-02 00:36:35,658] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2025-01-02 00:36:35,840] [pool-1-thread-4] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2025-01-02 00:36:36,362] [pool-1-thread-6] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2025-01-02 00:36:37,556] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2025-01-02 00:36:37,764] [pool-1-thread-7] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2025-01-02 00:36:38,824] [pool-1-thread-1] Initializing /data/melissa/annotation-test.dm3: [testng] [2025-01-02 00:36:39,023] [pool-1-thread-11] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] [2025-01-02 00:36:40,433] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2025-01-02 00:36:41,170] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2025-01-02 00:36:41,381] [pool-1-thread-9] Initializing /data/jay/DMtest.dm3: [testng] [2025-01-02 00:36:41,744] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2025-01-02 00:36:42,832] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2025-01-02 00:36:43,919] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] [2025-01-02 00:36:44,237] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2025-01-02 00:36:44,478] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2025-01-02 00:36:45,247] [pool-1-thread-12] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2025-01-02 00:36:46,936] [pool-1-thread-4] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2025-01-02 00:36:48,226] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2025-01-02 00:36:48,408] [pool-1-thread-9] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2025-01-02 00:36:52,908] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2025-01-02 00:36:53,094] [pool-1-thread-10] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2025-01-02 00:36:53,249] [pool-1-thread-11] Initializing /data/jay/ViewDMtest.dm3: [testng] [2025-01-02 00:36:53,405] [pool-1-thread-5] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] [2025-01-02 00:36:53,801] [pool-1-thread-6] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2025-01-02 00:36:55,577] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2025-01-02 00:36:55,729] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2025-01-02 00:36:56,130] [pool-1-thread-10] Initializing /data/jay/dnasample1.dm3: [testng] [2025-01-02 00:36:56,285] [pool-1-thread-2] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] [2025-01-02 00:36:58,091] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2025-01-02 00:36:58,776] [pool-1-thread-6] Initializing /data/qa-21761/example.dm4: [testng] [2025-01-02 00:36:58,992] [pool-1-thread-12] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] [2025-01-02 00:36:59,336] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2025-01-02 00:36:59,510] [pool-1-thread-3] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2025-01-02 00:37:00,397] [pool-1-thread-4] Initializing /data/jay/Carbon.34.dm3: [testng] [2025-01-02 00:37:00,572] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2025-01-02 00:37:00,780] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2025-01-02 00:37:01,626] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2025-01-02 00:37:01,787] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2025-01-02 00:37:01,996] [pool-1-thread-7] Initializing /data/samples/test-tiles.dm3: [testng] [2025-01-02 00:37:02,173] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] [2025-01-02 00:37:03,335] [pool-1-thread-11] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2025-01-02 00:37:04,119] [pool-1-thread-2] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2025-01-02 00:37:04,515] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2025-01-02 00:37:04,667] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2025-01-02 00:37:04,827] [pool-1-thread-7] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2025-01-02 00:37:06,035] [pool-1-thread-9] Initializing /data/jay/camtest1.dm3: [testng] [2025-01-02 00:37:06,879] [pool-1-thread-6] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2025-01-02 00:37:08,021] [pool-1-thread-10] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2025-01-02 00:37:09,105] [pool-1-thread-4] Initializing /data/melissa/annotation-test.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 37 seconds Finished: SUCCESS