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Started by upstream project "BIOFORMATS-test-repo" build number 306 originally caused by: Started by upstream project "Trigger" build number 328 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4 [BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins2648992782860207901.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_48517_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 03:35:27,641 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 03:35:27,642 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - No custom configurators were discovered as a service. [testng] 03:35:27,642 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:35:27,643 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:35:27,643 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 03:35:27,644 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 03:35:27,644 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 03:35:27,644 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:35:27,645 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:35:27,645 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 03:35:27,645 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 03:35:27,646 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 03:35:27,806 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 03:35:27,806 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 03:35:27,831 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 03:35:27,831 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 03:35:27,837 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 03:35:27,838 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 03:35:27,838 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 03:35:27,838 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 03:35:27,838 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@29215f06 - End of configuration. [testng] 03:35:27,839 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@b9b00e0 - Registering current configuration as safe fallback point [testng] 03:35:27,839 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 194 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-01-02 03:35:27,848] [main] java.version = 21 [testng] 03:35:27,851 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:35:27,851 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:35:27,894 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-01-02_03-35-27.log] [testng] 03:35:27,896 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b919693 - End of configuration. [testng] [2025-01-02 03:35:27,897] [main] testng.directory = /data [testng] [2025-01-02 03:35:27,898] [main] testng.configDirectory = /config [testng] [2025-01-02 03:35:27,906] [main] testng.multiplier = 1.0 [testng] [2025-01-02 03:35:27,907] [main] testng.in-memory = false [testng] [2025-01-02 03:35:27,907] [main] testng.allow-missing = false [testng] [2025-01-02 03:35:27,907] [main] user.language = en [testng] [2025-01-02 03:35:27,907] [main] user.country = ${user.country} [testng] [2025-01-02 03:35:27,907] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2025-01-02 03:37:14,155] [main] ---------------------------------------- [testng] [2025-01-02 03:37:14,156] [main] Total files: 15735 [testng] [2025-01-02 03:37:14,156] [main] Scan time: 106.248 s (6 ms/file) [testng] [2025-01-02 03:37:14,156] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-01-02 03:39:47,365] [pool-1-thread-1] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] 03:39:47,365 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 03:39:47,366 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:39:47,367 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-01-02_03-39-47.log] [testng] 03:39:47,367 |-INFO in ch.qos.logback.core.sift.SiftProcessor@10f699ee - End of configuration. [testng] [2025-01-02 03:39:48,198] [pool-1-thread-12] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] 03:39:48,198 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 03:39:48,198 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:39:48,199 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-01-02_03-39-48.log] [testng] 03:39:48,200 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f4df108 - End of configuration. [testng] [2025-01-02 03:39:49,163] [pool-1-thread-11] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] 03:39:49,163 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 03:39:49,163 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:39:49,164 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-01-02_03-39-49.log] [testng] 03:39:49,164 |-INFO in ch.qos.logback.core.sift.SiftProcessor@45139bd0 - End of configuration. [testng] [2025-01-02 03:39:50,083] [pool-1-thread-10] Initializing /data/converted/michel/c.tif: [testng] 03:39:50,083 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 03:39:50,083 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:39:50,084 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-01-02_03-39-50.log] [testng] 03:39:50,084 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f6249c - End of configuration. [testng] [2025-01-02 03:39:50,815] [pool-1-thread-9] Initializing /data/converted/converted/mri-stack.tif: [testng] 03:39:50,815 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 03:39:50,815 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:39:50,816 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-01-02_03-39-50.log] [testng] 03:39:50,816 |-INFO in ch.qos.logback.core.sift.SiftProcessor@61f761f5 - End of configuration. [testng] [2025-01-02 03:39:51,651] [pool-1-thread-8] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] 03:39:51,651 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 03:39:51,651 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:39:51,652 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-01-02_03-39-51.log] [testng] 03:39:51,652 |-INFO in ch.qos.logback.core.sift.SiftProcessor@463c8918 - End of configuration. [testng] [2025-01-02 03:39:52,429] [pool-1-thread-7] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] 03:39:52,430 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 03:39:52,430 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:39:52,430 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-01-02_03-39-52.log] [testng] 03:39:52,431 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4aba04f8 - End of configuration. [testng] [2025-01-02 03:39:53,524] [pool-1-thread-6] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] 03:39:53,525 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 03:39:53,525 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:39:53,525 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-01-02_03-39-53.log] [testng] 03:39:53,526 |-INFO in ch.qos.logback.core.sift.SiftProcessor@31c08da7 - End of configuration. [testng] [2025-01-02 03:39:54,283] [pool-1-thread-5] Initializing /data/converted/lior/live+cf2b.tif: [testng] 03:39:54,283 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 03:39:54,283 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:39:54,284 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-01-02_03-39-54.log] [testng] 03:39:54,284 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1d3b5cc6 - End of configuration. [testng] [2025-01-02 03:39:55,013] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] 03:39:55,013 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 03:39:55,013 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:39:55,014 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-01-02_03-39-55.log] [testng] 03:39:55,014 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c967322 - End of configuration. [testng] [2025-01-02 03:39:56,382] [pool-1-thread-3] Initializing /data/othmar/mozaic.tif: [testng] 03:39:56,382 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 03:39:56,382 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:39:56,383 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-01-02_03-39-56.log] [testng] 03:39:56,383 |-INFO in ch.qos.logback.core.sift.SiftProcessor@27d6d08 - End of configuration. [testng] [2025-01-02 03:39:57,665] [pool-1-thread-2] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] 03:39:57,665 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 03:39:57,665 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:39:57,666 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-01-02_03-39-57.log] [testng] 03:39:57,666 |-INFO in ch.qos.logback.core.sift.SiftProcessor@230e5553 - End of configuration. [testng] [2025-01-02 03:40:06,077] [pool-1-thread-11] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2025-01-02 03:40:17,072] [pool-1-thread-9] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2025-01-02 03:40:18,366] [pool-1-thread-8] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2025-01-02 03:40:19,463] [pool-1-thread-2] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2025-01-02 03:40:20,638] [pool-1-thread-7] Initializing /data/converted/converted/2chz.tif: [testng] [2025-01-02 03:40:21,622] [pool-1-thread-6] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2025-01-02 03:40:26,715] [pool-1-thread-10] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2025-01-02 03:40:32,588] [pool-1-thread-5] Initializing /data/converted/nicolas/image.tif: [testng] [2025-01-02 03:40:47,971] [pool-1-thread-6] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2025-01-02 03:40:50,913] [pool-1-thread-10] Initializing /data/scott/Slide133-11.tif: [testng] [2025-01-02 03:40:51,871] [pool-1-thread-5] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2025-01-02 03:41:10,580] [pool-1-thread-10] Initializing /data/converted/lior/live+cf5b.tif: [testng] [2025-01-02 03:41:15,561] [pool-1-thread-12] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2025-01-02 03:41:44,283] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2025-01-02 03:42:06,306] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2025-01-02 03:42:20,506] [pool-1-thread-7] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] [2025-01-02 03:42:33,334] [pool-1-thread-3] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2025-01-02 03:42:36,015] [pool-1-thread-6] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2025-01-02 03:42:48,293] [pool-1-thread-3] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2025-01-02 03:43:00,782] [pool-1-thread-2] Initializing /data/converted/stephan/notok1.tif: [testng] [2025-01-02 03:43:19,991] [pool-1-thread-3] Initializing /data/converted/converted/damian.tif: [testng] [2025-01-02 03:43:32,866] [pool-1-thread-3] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2025-01-02 03:43:50,589] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2025-01-02 03:44:02,950] [pool-1-thread-2] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] [2025-01-02 03:44:23,668] [pool-1-thread-2] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2025-01-02 03:44:36,905] [pool-1-thread-4] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2025-01-02 03:44:49,679] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2025-01-02 03:45:40,287] [pool-1-thread-1] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2025-01-02 03:46:13,841] [pool-1-thread-8] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2025-01-02 03:46:17,386] [pool-1-thread-10] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2025-01-02 03:46:20,246] [pool-1-thread-11] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2025-01-02 03:46:29,372] [pool-1-thread-7] Initializing /data/converted/darren/section0002_w1.tif: [testng] [2025-01-02 03:46:39,462] [pool-1-thread-5] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2025-01-02 03:46:43,254] [pool-1-thread-8] Initializing /data/converted/michel/d.tif: [testng] [2025-01-02 03:46:46,592] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2025-01-02 03:46:47,588] [pool-1-thread-10] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2025-01-02 03:47:02,229] [pool-1-thread-8] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2025-01-02 03:47:07,618] [pool-1-thread-10] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2025-01-02 03:47:25,138] [pool-1-thread-10] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2025-01-02 03:48:28,257] [pool-1-thread-9] Initializing /data/converted/othmar/mozaic.tif: [testng] [2025-01-02 03:48:46,044] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2025-01-02 03:49:08,577] [pool-1-thread-4] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2025-01-02 03:49:24,336] [pool-1-thread-2] Initializing /data/converted/converted/2chzt.tif: [testng] [2025-01-02 03:49:30,500] [pool-1-thread-3] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2025-01-02 03:50:26,337] [pool-1-thread-8] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2025-01-02 03:50:48,346] [pool-1-thread-8] Initializing /data/converted/dietmar/138.tif: [testng] [2025-01-02 03:50:50,544] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2025-01-02 03:51:08,440] [pool-1-thread-9] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2025-01-02 03:51:21,241] [pool-1-thread-7] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2025-01-02 03:51:58,184] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] [2025-01-02 03:52:11,686] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2025-01-02 03:52:49,981] [pool-1-thread-11] Initializing /data/converted/othmar/z-stack.tif: [testng] [2025-01-02 03:55:52,839] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2025-01-02 03:57:56,074] [pool-1-thread-8] Initializing /data/converted/karsten/Bild1.tif: [testng] [2025-01-02 03:58:20,715] [pool-1-thread-12] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] [2025-01-02 03:58:28,489] [pool-1-thread-8] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] [2025-01-02 03:58:31,905] [pool-1-thread-7] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2025-01-02 03:58:49,377] [pool-1-thread-12] Initializing /data/converted/sebastien/test.tif: [testng] [2025-01-02 03:58:54,057] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2025-01-02 03:58:55,668] [pool-1-thread-1] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] [2025-01-02 03:59:00,356] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2025-01-02 03:59:22,924] [pool-1-thread-9] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] [2025-01-02 04:02:35,847] [pool-1-thread-1] Initializing /data/converted/kelsey/432x342BW.tif: [testng] [2025-01-02 04:03:03,858] [pool-1-thread-1] Initializing /data/converted/dan/adultnr1.tif: [testng] [2025-01-02 04:03:46,009] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2025-01-02 04:04:11,352] [pool-1-thread-1] Initializing /data/converted/vladan/vladan.tif: [testng] [2025-01-02 04:06:15,544] [pool-1-thread-3] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2025-01-02 04:06:32,608] [pool-1-thread-7] Initializing /data/converted/stephan/notok2.tif: [testng] [2025-01-02 04:07:20,192] [pool-1-thread-4] Initializing /data/scott/Slide133-04.tif: [testng] [2025-01-02 04:07:35,771] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2025-01-02 04:07:53,420] [pool-1-thread-11] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] [2025-01-02 04:07:57,035] [pool-1-thread-4] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2025-01-02 04:08:26,636] [pool-1-thread-11] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2025-01-02 04:08:37,140] [pool-1-thread-4] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] [2025-01-02 04:08:47,873] [pool-1-thread-7] Initializing /data/scott/Slide133-08.tif: [testng] [2025-01-02 04:08:58,207] [pool-1-thread-11] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2025-01-02 04:09:17,270] [pool-1-thread-7] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2025-01-02 04:11:03,688] [pool-1-thread-1] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2025-01-02 04:12:00,167] [pool-1-thread-7] Initializing /data/converted/dietmar/137.tif: [testng] [2025-01-02 04:12:58,206] [pool-1-thread-1] Initializing /data/converted/kelsey/650x514BW.tif: [testng] [2025-01-02 04:13:06,990] [pool-1-thread-5] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2025-01-02 04:13:32,208] [pool-1-thread-1] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] [2025-01-02 04:15:29,437] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2025-01-02 04:17:00,832] [pool-1-thread-12] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2025-01-02 04:21:30,350] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2025-01-02 04:21:40,291] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2025-01-02 04:21:47,538] [pool-1-thread-12] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2025-01-02 04:22:23,718] [pool-1-thread-12] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2025-01-02 04:22:27,887] [pool-1-thread-11] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2025-01-02 04:23:36,004] [pool-1-thread-10] Initializing /data/converted/karsten/Bild2.tif: [testng] [2025-01-02 04:24:24,326] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2025-01-02 04:24:58,775] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2025-01-02 04:25:05,819] [pool-1-thread-12] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2025-01-02 04:25:30,565] [pool-1-thread-5] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2025-01-02 04:25:43,002] [pool-1-thread-3] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2025-01-02 04:26:24,919] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2025-01-02 04:27:52,735] [pool-1-thread-11] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2025-01-02 04:28:24,110] [pool-1-thread-11] Initializing /data/scott/Slide133-01.tif: [testng] [2025-01-02 04:28:35,499] [pool-1-thread-3] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2025-01-02 04:28:52,692] [pool-1-thread-9] Initializing /data/converted/michel/b.tif: [testng] [2025-01-02 04:28:58,612] [pool-1-thread-11] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2025-01-02 04:29:43,170] [pool-1-thread-3] Initializing /data/converted/michel/e.tif: [testng] [2025-01-02 04:29:47,908] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2025-01-02 04:30:01,658] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2025-01-02 04:31:06,917] [pool-1-thread-3] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2025-01-02 04:31:46,450] [pool-1-thread-7] Initializing /data/converted/sebastien/F1.tif: [testng] [2025-01-02 04:31:50,586] [pool-1-thread-3] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2025-01-02 04:32:25,366] [pool-1-thread-3] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] [2025-01-02 04:32:29,571] [pool-1-thread-1] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2025-01-02 04:34:42,767] [pool-1-thread-10] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2025-01-02 04:34:49,834] [pool-1-thread-2] Initializing /data/converted/michel/a.tif: [testng] [2025-01-02 04:35:10,995] [pool-1-thread-10] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2025-01-02 04:35:18,335] [pool-1-thread-2] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] 05:37:14,645 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 05:37:14,645 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:37:14,646 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-01-02_05-37-14.log] [testng] 05:37:14,647 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6bc6400e - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 121 minutes 52 seconds Finished: SUCCESS