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Started by upstream project "BIOFORMATS-test-repo" build number 309 originally caused by: Started by upstream project "Trigger" build number 331 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins18416044585014958562.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_49012_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 03:32:43,467 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 03:32:43,468 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service. [testng] 03:32:43,468 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:32:43,469 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:32:43,470 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 03:32:43,470 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 03:32:43,471 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 03:32:43,471 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:32:43,471 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:32:43,472 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 03:32:43,472 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 03:32:43,473 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 03:32:43,638 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 03:32:43,638 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 03:32:43,660 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 03:32:43,660 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 03:32:43,666 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 03:32:43,666 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 03:32:43,666 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 03:32:43,666 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 03:32:43,666 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration. [testng] 03:32:43,667 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point [testng] 03:32:43,668 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 197 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-01-05 03:32:43,676] [main] java.version = 17.0.2 [testng] 03:32:43,679 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:32:43,679 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:32:43,719 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-01-05_03-32-43.log] [testng] 03:32:43,721 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration. [testng] [2025-01-05 03:32:43,723] [main] testng.directory = /data [testng] [2025-01-05 03:32:43,723] [main] testng.configDirectory = /config [testng] [2025-01-05 03:32:43,731] [main] testng.multiplier = 1.0 [testng] [2025-01-05 03:32:43,732] [main] testng.in-memory = false [testng] [2025-01-05 03:32:43,732] [main] testng.allow-missing = false [testng] [2025-01-05 03:32:43,732] [main] user.language = en [testng] [2025-01-05 03:32:43,732] [main] user.country = ${user.country} [testng] [2025-01-05 03:32:43,732] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2025-01-05 03:33:53,326] [main] ---------------------------------------- [testng] [2025-01-05 03:33:53,326] [main] Total files: 15735 [testng] [2025-01-05 03:33:53,326] [main] Scan time: 69.594 s (4 ms/file) [testng] [2025-01-05 03:33:53,327] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-01-05 03:34:51,788] [pool-1-thread-1] Initializing /data/converted/stephan/notok1.tif: [testng] 03:34:51,788 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 03:34:51,788 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:51,789 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-01-05_03-34-51.log] [testng] 03:34:51,790 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1872a3db - End of configuration. [testng] [2025-01-05 03:34:52,038] [pool-1-thread-12] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] 03:34:52,038 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 03:34:52,038 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:52,039 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-01-05_03-34-52.log] [testng] 03:34:52,039 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12aadae0 - End of configuration. [testng] [2025-01-05 03:34:52,280] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] 03:34:52,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 03:34:52,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:52,281 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-01-05_03-34-52.log] [testng] 03:34:52,281 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e7ceffa - End of configuration. [testng] [2025-01-05 03:34:52,666] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] 03:34:52,667 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 03:34:52,667 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:52,667 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-01-05_03-34-52.log] [testng] 03:34:52,668 |-INFO in ch.qos.logback.core.sift.SiftProcessor@317547e1 - End of configuration. [testng] [2025-01-05 03:34:53,061] [pool-1-thread-9] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] 03:34:53,061 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 03:34:53,061 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:53,061 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-01-05_03-34-53.log] [testng] 03:34:53,062 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f993f61 - End of configuration. [testng] [2025-01-05 03:34:53,862] [pool-1-thread-8] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] 03:34:53,862 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 03:34:53,862 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:53,862 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-01-05_03-34-53.log] [testng] 03:34:53,863 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7dcc0d44 - End of configuration. [testng] [2025-01-05 03:34:54,016] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] 03:34:54,016 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 03:34:54,016 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:54,017 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-01-05_03-34-54.log] [testng] 03:34:54,017 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58c2a7a0 - End of configuration. [testng] [2025-01-05 03:34:54,365] [pool-1-thread-6] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] 03:34:54,365 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 03:34:54,365 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:54,365 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-01-05_03-34-54.log] [testng] 03:34:54,366 |-INFO in ch.qos.logback.core.sift.SiftProcessor@73596ff3 - End of configuration. [testng] [2025-01-05 03:34:54,507] [pool-1-thread-5] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] 03:34:54,507 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 03:34:54,507 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:54,507 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-01-05_03-34-54.log] [testng] 03:34:54,508 |-INFO in ch.qos.logback.core.sift.SiftProcessor@43428a11 - End of configuration. [testng] [2025-01-05 03:34:54,928] [pool-1-thread-4] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] 03:34:54,928 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 03:34:54,928 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:54,929 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-01-05_03-34-54.log] [testng] 03:34:54,929 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e8adef1 - End of configuration. [testng] [2025-01-05 03:34:55,455] [pool-1-thread-3] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] 03:34:55,455 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 03:34:55,455 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:55,456 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-01-05_03-34-55.log] [testng] 03:34:55,456 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d7500b2 - End of configuration. [testng] [2025-01-05 03:34:56,402] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] 03:34:56,402 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 03:34:56,402 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:56,403 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-01-05_03-34-56.log] [testng] 03:34:56,403 |-INFO in ch.qos.logback.core.sift.SiftProcessor@61ff656d - End of configuration. [testng] [2025-01-05 03:35:06,223] [pool-1-thread-12] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2025-01-05 03:35:10,712] [pool-1-thread-4] Initializing /data/scott/Slide133-11.tif: [testng] [2025-01-05 03:35:11,953] [pool-1-thread-6] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2025-01-05 03:35:22,412] [pool-1-thread-12] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] [2025-01-05 03:35:23,994] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2025-01-05 03:35:26,626] [pool-1-thread-4] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2025-01-05 03:35:27,465] [pool-1-thread-6] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2025-01-05 03:35:43,272] [pool-1-thread-4] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2025-01-05 03:35:48,099] [pool-1-thread-1] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2025-01-05 03:36:13,304] [pool-1-thread-5] Initializing /data/converted/dietmar/137.tif: [testng] [2025-01-05 03:36:20,812] [pool-1-thread-6] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2025-01-05 03:37:05,763] [pool-1-thread-12] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2025-01-05 03:37:16,199] [pool-1-thread-12] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2025-01-05 03:37:32,046] [pool-1-thread-12] Initializing /data/converted/dietmar/138.tif: [testng] [2025-01-05 03:38:49,197] [pool-1-thread-11] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2025-01-05 03:39:03,808] [pool-1-thread-10] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2025-01-05 03:39:39,832] [pool-1-thread-2] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2025-01-05 03:39:50,210] [pool-1-thread-7] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] [2025-01-05 03:40:21,607] [pool-1-thread-8] Initializing /data/converted/michel/d.tif: [testng] [2025-01-05 03:40:58,666] [pool-1-thread-8] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2025-01-05 03:41:23,232] [pool-1-thread-8] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] [2025-01-05 03:41:49,931] [pool-1-thread-8] Initializing /data/converted/darren/section0002_w1.tif: [testng] [2025-01-05 03:41:51,434] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2025-01-05 03:42:16,959] [pool-1-thread-3] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2025-01-05 03:42:19,475] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2025-01-05 03:42:21,302] [pool-1-thread-4] Initializing /data/converted/converted/damian.tif: [testng] [2025-01-05 03:42:43,821] [pool-1-thread-4] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2025-01-05 03:42:53,054] [pool-1-thread-11] Initializing /data/converted/michel/e.tif: [testng] [2025-01-05 03:43:26,377] [pool-1-thread-7] Initializing /data/scott/Slide133-08.tif: [testng] [2025-01-05 03:43:44,977] [pool-1-thread-11] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2025-01-05 03:43:46,446] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2025-01-05 03:43:55,347] [pool-1-thread-7] Initializing /data/converted/stephan/notok2.tif: [testng] [2025-01-05 03:44:25,802] [pool-1-thread-12] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2025-01-05 03:44:37,401] [pool-1-thread-11] Initializing /data/converted/lior/live+cf5b.tif: [testng] [2025-01-05 03:45:22,715] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2025-01-05 03:45:42,206] [pool-1-thread-7] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2025-01-05 03:46:19,250] [pool-1-thread-12] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2025-01-05 03:46:24,588] [pool-1-thread-7] Initializing /data/scott/Slide133-01.tif: [testng] [2025-01-05 03:46:44,797] [pool-1-thread-12] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2025-01-05 03:46:48,422] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2025-01-05 03:47:03,611] [pool-1-thread-12] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2025-01-05 03:47:25,171] [pool-1-thread-3] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2025-01-05 03:48:13,798] [pool-1-thread-9] Initializing /data/converted/michel/a.tif: [testng] [2025-01-05 03:48:16,658] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2025-01-05 03:48:31,331] [pool-1-thread-9] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2025-01-05 03:48:43,183] [pool-1-thread-8] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2025-01-05 03:48:55,512] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2025-01-05 03:49:26,180] [pool-1-thread-8] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2025-01-05 03:49:45,340] [pool-1-thread-1] Initializing /data/converted/kelsey/432x342BW.tif: [testng] [2025-01-05 03:49:48,782] [pool-1-thread-6] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] [2025-01-05 03:50:06,665] [pool-1-thread-1] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2025-01-05 03:50:26,545] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2025-01-05 03:50:31,660] [pool-1-thread-9] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2025-01-05 03:50:38,978] [pool-1-thread-4] Initializing /data/converted/converted/2chz.tif: [testng] [2025-01-05 03:50:57,874] [pool-1-thread-9] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2025-01-05 03:52:07,957] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2025-01-05 03:52:54,665] [pool-1-thread-7] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] [2025-01-05 03:53:02,391] [pool-1-thread-4] Initializing /data/othmar/mozaic.tif: [testng] [2025-01-05 03:53:58,945] [pool-1-thread-8] Initializing /data/converted/othmar/z-stack.tif: [testng] [2025-01-05 03:54:09,844] [pool-1-thread-9] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] [2025-01-05 03:54:29,470] [pool-1-thread-9] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2025-01-05 03:54:32,101] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2025-01-05 03:55:06,027] [pool-1-thread-5] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2025-01-05 03:55:11,992] [pool-1-thread-9] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2025-01-05 03:55:24,350] [pool-1-thread-6] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] [2025-01-05 03:56:11,460] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2025-01-05 03:57:10,231] [pool-1-thread-1] Initializing /data/converted/converted/2chzt.tif: [testng] [2025-01-05 03:58:21,401] [pool-1-thread-11] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2025-01-05 04:00:30,289] [pool-1-thread-10] Initializing /data/converted/sebastien/F1.tif: [testng] [2025-01-05 04:00:56,231] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2025-01-05 04:02:46,449] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2025-01-05 04:03:00,619] [pool-1-thread-5] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2025-01-05 04:03:09,635] [pool-1-thread-3] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2025-01-05 04:03:52,475] [pool-1-thread-10] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2025-01-05 04:04:35,400] [pool-1-thread-10] Initializing /data/scott/Slide133-04.tif: [testng] [2025-01-05 04:04:56,845] [pool-1-thread-5] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2025-01-05 04:05:07,695] [pool-1-thread-10] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] [2025-01-05 04:05:44,388] [pool-1-thread-10] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2025-01-05 04:06:20,840] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2025-01-05 04:07:41,072] [pool-1-thread-8] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] [2025-01-05 04:08:35,489] [pool-1-thread-11] Initializing /data/converted/dan/adultnr1.tif: [testng] [2025-01-05 04:08:50,129] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2025-01-05 04:09:26,705] [pool-1-thread-5] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2025-01-05 04:09:56,076] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2025-01-05 04:11:58,562] [pool-1-thread-4] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2025-01-05 04:13:49,052] [pool-1-thread-4] Initializing /data/converted/karsten/Bild1.tif: [testng] [2025-01-05 04:14:39,333] [pool-1-thread-4] Initializing /data/converted/kelsey/650x514BW.tif: [testng] [2025-01-05 04:15:12,532] [pool-1-thread-4] Initializing /data/converted/converted/mri-stack.tif: [testng] [2025-01-05 04:15:44,488] [pool-1-thread-4] Initializing /data/converted/sebastien/test.tif: [testng] [2025-01-05 04:16:56,329] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2025-01-05 04:17:49,650] [pool-1-thread-12] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] [2025-01-05 04:19:22,038] [pool-1-thread-11] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2025-01-05 04:19:23,930] [pool-1-thread-8] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2025-01-05 04:19:47,950] [pool-1-thread-11] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2025-01-05 04:21:35,638] [pool-1-thread-6] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2025-01-05 04:22:18,614] [pool-1-thread-11] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2025-01-05 04:22:49,176] [pool-1-thread-11] Initializing /data/converted/michel/b.tif: [testng] [2025-01-05 04:23:01,486] [pool-1-thread-8] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2025-01-05 04:23:22,614] [pool-1-thread-11] Initializing /data/converted/nicolas/image.tif: [testng] [2025-01-05 04:23:43,027] [pool-1-thread-11] Initializing /data/converted/vladan/vladan.tif: [testng] [2025-01-05 04:23:59,485] [pool-1-thread-12] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2025-01-05 04:24:04,629] [pool-1-thread-4] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2025-01-05 04:24:09,670] [pool-1-thread-10] Initializing /data/converted/karsten/Bild2.tif: [testng] [2025-01-05 04:24:12,101] [pool-1-thread-12] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2025-01-05 04:24:32,872] [pool-1-thread-12] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] [2025-01-05 04:24:41,877] [pool-1-thread-10] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2025-01-05 04:25:01,673] [pool-1-thread-12] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2025-01-05 04:25:06,437] [pool-1-thread-10] Initializing /data/converted/othmar/mozaic.tif: [testng] [2025-01-05 04:25:30,372] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2025-01-05 04:27:41,816] [pool-1-thread-7] Initializing /data/converted/michel/c.tif: [testng] [2025-01-05 04:28:15,508] [pool-1-thread-7] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2025-01-05 04:28:50,659] [pool-1-thread-7] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2025-01-05 04:28:57,277] [pool-1-thread-10] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] 05:12:01,879 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 05:12:01,879 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:12:01,881 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-01-05_05-12-01.log] [testng] 05:12:01,881 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e13a74 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 99 minutes 23 seconds Finished: SUCCESS