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Started by upstream project "BIOFORMATS-test-repo" build number 310 originally caused by: Started by upstream project "Trigger" build number 332 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4 [BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins16135049547149864078.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_49177_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 03:18:20,173 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 03:18:20,175 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service. [testng] 03:18:20,175 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:18:20,176 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:18:20,176 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 03:18:20,176 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 03:18:20,176 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 03:18:20,176 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:18:20,177 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:18:20,177 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 03:18:20,177 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 03:18:20,177 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 03:18:20,406 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 03:18:20,406 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 03:18:20,433 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 03:18:20,434 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 03:18:20,441 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 03:18:20,442 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 03:18:20,442 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 03:18:20,442 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 03:18:20,442 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration. [testng] 03:18:20,443 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point [testng] 03:18:20,443 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 266 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-01-06 03:18:20,453] [main] java.version = 1.8.0_342 [testng] 03:18:20,456 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:18:20,456 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:18:20,501 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-01-06_03-18-20.log] [testng] 03:18:20,502 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2025-01-06 03:18:20,504] [main] testng.directory = /data [testng] [2025-01-06 03:18:20,505] [main] testng.configDirectory = /config [testng] [2025-01-06 03:18:20,517] [main] testng.multiplier = 1.0 [testng] [2025-01-06 03:18:20,517] [main] testng.in-memory = false [testng] [2025-01-06 03:18:20,517] [main] testng.allow-missing = false [testng] [2025-01-06 03:18:20,517] [main] user.language = fr [testng] [2025-01-06 03:18:20,517] [main] user.country = FR [testng] [2025-01-06 03:18:20,517] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2025-01-06 03:19:52,365] [main] ---------------------------------------- [testng] [2025-01-06 03:19:52,365] [main] Total files: 15735 [testng] [2025-01-06 03:19:52,365] [main] Scan time: 91.848 s (5 ms/file) [testng] [2025-01-06 03:19:52,365] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-01-06 03:21:07,358] [pool-1-thread-1] Initializing /data/converted/converted/damian-compressed.tif: [testng] 03:21:07,358 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 03:21:07,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:21:07,359 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-01-06_03-21-07.log] [testng] 03:21:07,360 |-INFO in ch.qos.logback.core.sift.SiftProcessor@10215fe9 - End of configuration. [testng] [2025-01-06 03:21:07,964] [pool-1-thread-12] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] 03:21:07,964 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 03:21:07,964 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:21:07,965 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-01-06_03-21-07.log] [testng] 03:21:07,965 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5248690c - End of configuration. [testng] [2025-01-06 03:21:08,922] [pool-1-thread-11] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] 03:21:08,923 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 03:21:08,923 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:21:08,924 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-01-06_03-21-08.log] [testng] 03:21:08,924 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b6ea050 - End of configuration. [testng] [2025-01-06 03:21:09,293] [pool-1-thread-10] Initializing /data/converted/karsten/Bild1.tif: [testng] 03:21:09,293 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 03:21:09,293 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:21:09,294 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-01-06_03-21-09.log] [testng] 03:21:09,294 |-INFO in ch.qos.logback.core.sift.SiftProcessor@19a5bb92 - End of configuration. [testng] [2025-01-06 03:21:09,665] [pool-1-thread-9] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] 03:21:09,665 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 03:21:09,666 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:21:09,666 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-01-06_03-21-09.log] [testng] 03:21:09,666 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37817aea - End of configuration. [testng] [2025-01-06 03:21:10,114] [pool-1-thread-8] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] 03:21:10,114 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 03:21:10,114 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:21:10,115 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-01-06_03-21-10.log] [testng] 03:21:10,115 |-INFO in ch.qos.logback.core.sift.SiftProcessor@16e3d656 - End of configuration. [testng] [2025-01-06 03:21:10,878] [pool-1-thread-7] Initializing /data/converted/darren/section0002_w1.tif: [testng] 03:21:10,878 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 03:21:10,878 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:21:10,878 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-01-06_03-21-10.log] [testng] 03:21:10,879 |-INFO in ch.qos.logback.core.sift.SiftProcessor@66d8263d - End of configuration. [testng] [2025-01-06 03:21:11,240] [pool-1-thread-6] Initializing /data/scott/Slide133-04.tif: [testng] 03:21:11,240 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 03:21:11,240 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:21:11,241 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-01-06_03-21-11.log] [testng] 03:21:11,241 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1c0837f3 - End of configuration. [testng] [2025-01-06 03:21:11,806] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] 03:21:11,806 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 03:21:11,806 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:21:11,806 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-01-06_03-21-11.log] [testng] 03:21:11,807 |-INFO in ch.qos.logback.core.sift.SiftProcessor@16759bdc - End of configuration. [testng] [2025-01-06 03:21:12,581] [pool-1-thread-4] Initializing /data/converted/lior/live+cf5b.tif: [testng] 03:21:12,581 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 03:21:12,582 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:21:12,582 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-01-06_03-21-12.log] [testng] 03:21:12,582 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c7c656a - End of configuration. [testng] [2025-01-06 03:21:12,967] [pool-1-thread-3] Initializing /data/converted/karsten/Bild2.tif: [testng] 03:21:12,967 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 03:21:12,967 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:21:12,968 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-01-06_03-21-12.log] [testng] 03:21:12,968 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d1a30e5 - End of configuration. [testng] [2025-01-06 03:21:13,327] [pool-1-thread-2] Initializing /data/converted/converted/2chz.tif: [testng] 03:21:13,327 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 03:21:13,327 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:21:13,328 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-01-06_03-21-13.log] [testng] 03:21:13,328 |-INFO in ch.qos.logback.core.sift.SiftProcessor@64060797 - End of configuration. [testng] [2025-01-06 03:21:27,147] [pool-1-thread-1] Initializing /data/converted/converted/2chzt.tif: [testng] [2025-01-06 03:21:31,632] [pool-1-thread-11] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2025-01-06 03:21:33,567] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2025-01-06 03:21:34,528] [pool-1-thread-10] Initializing /data/converted/dan/adultnr1.tif: [testng] [2025-01-06 03:21:35,263] [pool-1-thread-6] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2025-01-06 03:21:36,063] [pool-1-thread-7] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2025-01-06 03:21:41,532] [pool-1-thread-4] Initializing /data/converted/michel/d.tif: [testng] [2025-01-06 03:21:42,388] [pool-1-thread-8] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2025-01-06 03:21:47,712] [pool-1-thread-11] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2025-01-06 03:22:01,221] [pool-1-thread-4] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2025-01-06 03:22:14,099] [pool-1-thread-4] Initializing /data/scott/Slide133-01.tif: [testng] [2025-01-06 03:22:16,450] [pool-1-thread-10] Initializing /data/converted/othmar/z-stack.tif: [testng] [2025-01-06 03:22:35,056] [pool-1-thread-4] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2025-01-06 03:22:48,427] [pool-1-thread-4] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] [2025-01-06 03:22:52,859] [pool-1-thread-2] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2025-01-06 03:23:01,777] [pool-1-thread-4] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2025-01-06 03:23:07,684] [pool-1-thread-4] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] [2025-01-06 03:23:19,480] [pool-1-thread-9] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2025-01-06 03:23:48,970] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2025-01-06 03:25:05,900] [pool-1-thread-2] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2025-01-06 03:25:14,767] [pool-1-thread-5] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2025-01-06 03:25:23,555] [pool-1-thread-2] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2025-01-06 03:25:31,466] [pool-1-thread-5] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2025-01-06 03:25:32,318] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2025-01-06 03:25:38,218] [pool-1-thread-3] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2025-01-06 03:26:24,444] [pool-1-thread-6] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2025-01-06 03:26:53,281] [pool-1-thread-3] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2025-01-06 03:27:17,585] [pool-1-thread-6] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2025-01-06 03:27:35,564] [pool-1-thread-3] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2025-01-06 03:27:48,849] [pool-1-thread-5] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2025-01-06 03:28:35,282] [pool-1-thread-5] Initializing /data/converted/stephan/notok2.tif: [testng] [2025-01-06 03:29:02,350] [pool-1-thread-9] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2025-01-06 03:30:55,152] [pool-1-thread-5] Initializing /data/converted/converted/damian.tif: [testng] [2025-01-06 03:31:19,445] [pool-1-thread-5] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2025-01-06 03:33:15,554] [pool-1-thread-5] Initializing /data/converted/converted/mri-stack.tif: [testng] [2025-01-06 03:33:22,716] [pool-1-thread-7] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2025-01-06 03:33:40,986] [pool-1-thread-5] Initializing /data/scott/Slide133-08.tif: [testng] [2025-01-06 03:33:47,332] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2025-01-06 03:34:11,136] [pool-1-thread-5] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2025-01-06 03:34:25,387] [pool-1-thread-12] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] [2025-01-06 03:34:30,987] [pool-1-thread-10] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2025-01-06 03:34:43,694] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2025-01-06 03:36:11,885] [pool-1-thread-5] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] [2025-01-06 03:37:02,652] [pool-1-thread-6] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] [2025-01-06 03:37:33,417] [pool-1-thread-6] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2025-01-06 03:37:38,753] [pool-1-thread-4] Initializing /data/converted/michel/c.tif: [testng] [2025-01-06 03:38:09,887] [pool-1-thread-4] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2025-01-06 03:38:27,082] [pool-1-thread-10] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] [2025-01-06 03:38:37,942] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2025-01-06 03:39:21,723] [pool-1-thread-9] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] [2025-01-06 03:39:26,747] [pool-1-thread-5] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2025-01-06 03:40:56,289] [pool-1-thread-12] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2025-01-06 03:41:08,435] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2025-01-06 03:41:25,209] [pool-1-thread-11] Initializing /data/converted/dietmar/138.tif: [testng] [2025-01-06 03:41:42,610] [pool-1-thread-12] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] [2025-01-06 03:42:14,123] [pool-1-thread-12] Initializing /data/converted/sebastien/test.tif: [testng] [2025-01-06 03:44:05,900] [pool-1-thread-8] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2025-01-06 03:44:25,676] [pool-1-thread-10] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2025-01-06 03:46:24,685] [pool-1-thread-4] Initializing /data/converted/dietmar/137.tif: [testng] [2025-01-06 03:46:41,098] [pool-1-thread-8] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2025-01-06 03:47:30,182] [pool-1-thread-6] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2025-01-06 03:47:36,553] [pool-1-thread-8] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2025-01-06 03:49:12,932] [pool-1-thread-7] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2025-01-06 03:49:33,580] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2025-01-06 03:49:50,293] [pool-1-thread-7] Initializing /data/converted/othmar/mozaic.tif: [testng] [2025-01-06 03:50:36,795] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2025-01-06 03:51:29,636] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2025-01-06 03:54:28,930] [pool-1-thread-7] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2025-01-06 03:55:07,595] [pool-1-thread-4] Initializing /data/converted/michel/b.tif: [testng] [2025-01-06 03:55:09,816] [pool-1-thread-7] Initializing /data/converted/michel/e.tif: [testng] [2025-01-06 03:55:31,759] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2025-01-06 03:55:55,187] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2025-01-06 03:56:20,158] [pool-1-thread-7] Initializing /data/scott/Slide133-11.tif: [testng] [2025-01-06 03:56:58,995] [pool-1-thread-7] Initializing /data/converted/kelsey/650x514BW.tif: [testng] [2025-01-06 03:57:29,422] [pool-1-thread-7] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2025-01-06 03:58:10,887] [pool-1-thread-7] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] [2025-01-06 03:58:16,995] [pool-1-thread-11] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2025-01-06 03:58:46,278] [pool-1-thread-11] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2025-01-06 03:59:19,170] [pool-1-thread-8] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2025-01-06 03:59:45,458] [pool-1-thread-1] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2025-01-06 03:59:56,349] [pool-1-thread-6] Initializing /data/converted/nicolas/image.tif: [testng] [2025-01-06 04:00:25,876] [pool-1-thread-6] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2025-01-06 04:00:55,460] [pool-1-thread-5] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2025-01-06 04:00:58,614] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2025-01-06 04:01:39,826] [pool-1-thread-5] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] [2025-01-06 04:01:54,572] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2025-01-06 04:02:16,354] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2025-01-06 04:02:18,238] [pool-1-thread-7] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] [2025-01-06 04:02:57,895] [pool-1-thread-7] Initializing /data/converted/stephan/notok1.tif: [testng] [2025-01-06 04:03:34,911] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2025-01-06 04:04:25,493] [pool-1-thread-4] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2025-01-06 04:04:58,550] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2025-01-06 04:05:02,462] [pool-1-thread-11] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2025-01-06 04:05:06,210] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2025-01-06 04:05:10,080] [pool-1-thread-10] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2025-01-06 04:05:47,317] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2025-01-06 04:09:50,669] [pool-1-thread-12] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] [2025-01-06 04:10:42,735] [pool-1-thread-6] Initializing /data/converted/michel/a.tif: [testng] [2025-01-06 04:11:13,530] [pool-1-thread-6] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2025-01-06 04:11:30,756] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] [2025-01-06 04:11:35,537] [pool-1-thread-1] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2025-01-06 04:11:55,936] [pool-1-thread-6] Initializing /data/converted/vladan/vladan.tif: [testng] [2025-01-06 04:12:08,753] [pool-1-thread-8] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] [2025-01-06 04:13:40,171] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2025-01-06 04:13:42,376] [pool-1-thread-11] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2025-01-06 04:13:44,553] [pool-1-thread-4] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2025-01-06 04:16:18,719] [pool-1-thread-11] Initializing /data/converted/sebastien/F1.tif: [testng] [2025-01-06 04:16:39,350] [pool-1-thread-10] Initializing /data/othmar/mozaic.tif: [testng] [2025-01-06 04:17:40,685] [pool-1-thread-9] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2025-01-06 04:18:05,889] [pool-1-thread-9] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2025-01-06 04:18:10,061] [pool-1-thread-6] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2025-01-06 04:18:33,457] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2025-01-06 04:18:48,001] [pool-1-thread-5] Initializing /data/converted/kelsey/432x342BW.tif: [testng] 04:51:02,070 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 04:51:02,070 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:51:02,071 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-01-06_04-51-02.log] [testng] 04:51:02,072 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1830b08d - End of configuration. [testng] 04:53:47,343 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 04:53:47,343 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:53:47,344 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-01-06_04-53-47.log] [testng] 04:53:47,344 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1504db11 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 95 minutes 32 seconds Finished: SUCCESS