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Started by upstream project "BIOFORMATS-test-repo" build number 311 originally caused by: Started by upstream project "Trigger" build number 333 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins11303593318708381290.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_49342_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 03:32:23,426 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 03:32:23,429 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service. [testng] 03:32:23,429 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:32:23,430 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:32:23,430 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 03:32:23,431 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 03:32:23,431 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 03:32:23,431 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:32:23,431 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:32:23,432 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 03:32:23,432 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 03:32:23,433 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 03:32:23,600 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 03:32:23,600 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 03:32:23,623 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 03:32:23,623 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 03:32:23,629 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 03:32:23,629 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 03:32:23,629 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 03:32:23,629 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 03:32:23,630 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration. [testng] 03:32:23,630 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point [testng] 03:32:23,630 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 199 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-01-07 03:32:23,639] [main] java.version = 11.0.16 [testng] 03:32:23,643 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:32:23,643 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:32:23,685 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-01-07_03-32-23.log] [testng] 03:32:23,686 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2025-01-07 03:32:23,688] [main] testng.directory = /data [testng] [2025-01-07 03:32:23,688] [main] testng.configDirectory = /config [testng] [2025-01-07 03:32:23,698] [main] testng.multiplier = 1.0 [testng] [2025-01-07 03:32:23,699] [main] testng.in-memory = false [testng] [2025-01-07 03:32:23,699] [main] testng.allow-missing = false [testng] [2025-01-07 03:32:23,699] [main] user.language = en [testng] [2025-01-07 03:32:23,700] [main] user.country = ${user.country} [testng] [2025-01-07 03:32:23,700] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2025-01-07 03:33:31,714] [main] ---------------------------------------- [testng] [2025-01-07 03:33:31,715] [main] Total files: 15735 [testng] [2025-01-07 03:33:31,715] [main] Scan time: 68.014 s (4 ms/file) [testng] [2025-01-07 03:33:31,715] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-01-07 03:34:56,151] [pool-1-thread-1] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] 03:34:56,151 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 03:34:56,152 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:56,153 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-01-07_03-34-56.log] [testng] 03:34:56,154 |-INFO in ch.qos.logback.core.sift.SiftProcessor@46df3513 - End of configuration. [testng] [2025-01-07 03:34:56,546] [pool-1-thread-12] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] 03:34:56,546 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 03:34:56,546 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:56,546 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-01-07_03-34-56.log] [testng] 03:34:56,547 |-INFO in ch.qos.logback.core.sift.SiftProcessor@32281d4f - End of configuration. [testng] [2025-01-07 03:34:56,903] [pool-1-thread-11] Initializing /data/converted/sebastien/test.tif: [testng] 03:34:56,903 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 03:34:56,903 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:56,904 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-01-07_03-34-56.log] [testng] 03:34:56,904 |-INFO in ch.qos.logback.core.sift.SiftProcessor@656e0195 - End of configuration. [testng] [2025-01-07 03:34:57,420] [pool-1-thread-10] Initializing /data/converted/nicolas/image.tif: [testng] 03:34:57,420 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 03:34:57,420 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:57,421 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-01-07_03-34-57.log] [testng] 03:34:57,421 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4a395f29 - End of configuration. [testng] [2025-01-07 03:34:57,709] [pool-1-thread-9] Initializing /data/converted/dan/adultnr1.tif: [testng] 03:34:57,709 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 03:34:57,709 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:57,710 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-01-07_03-34-57.log] [testng] 03:34:57,710 |-INFO in ch.qos.logback.core.sift.SiftProcessor@66ffc860 - End of configuration. [testng] [2025-01-07 03:34:58,051] [pool-1-thread-8] Initializing /data/converted/lior/live+cf2b.tif: [testng] 03:34:58,051 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 03:34:58,051 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:58,051 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-01-07_03-34-58.log] [testng] 03:34:58,052 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6146994 - End of configuration. [testng] [2025-01-07 03:34:58,416] [pool-1-thread-7] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] 03:34:58,416 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 03:34:58,416 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:58,417 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-01-07_03-34-58.log] [testng] 03:34:58,417 |-INFO in ch.qos.logback.core.sift.SiftProcessor@597c647e - End of configuration. [testng] [2025-01-07 03:34:59,604] [pool-1-thread-6] Initializing /data/scott/Slide133-11.tif: [testng] 03:34:59,604 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 03:34:59,604 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:59,604 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-01-07_03-34-59.log] [testng] 03:34:59,605 |-INFO in ch.qos.logback.core.sift.SiftProcessor@31b89335 - End of configuration. [testng] [2025-01-07 03:34:59,979] [pool-1-thread-5] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] 03:34:59,979 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 03:34:59,979 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:59,980 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-01-07_03-34-59.log] [testng] 03:34:59,980 |-INFO in ch.qos.logback.core.sift.SiftProcessor@119ee5d6 - End of configuration. [testng] [2025-01-07 03:35:00,531] [pool-1-thread-4] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] 03:35:00,531 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 03:35:00,531 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:35:00,532 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-01-07_03-35-00.log] [testng] 03:35:00,532 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2a628378 - End of configuration. [testng] [2025-01-07 03:35:01,052] [pool-1-thread-3] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] 03:35:01,052 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 03:35:01,053 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:35:01,053 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-01-07_03-35-01.log] [testng] 03:35:01,053 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49e1efa8 - End of configuration. [testng] [2025-01-07 03:35:01,453] [pool-1-thread-2] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] 03:35:01,454 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 03:35:01,454 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:35:01,454 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-01-07_03-35-01.log] [testng] 03:35:01,454 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2000e8d5 - End of configuration. [testng] [2025-01-07 03:35:16,421] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2025-01-07 03:35:18,241] [pool-1-thread-10] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2025-01-07 03:35:19,912] [pool-1-thread-6] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2025-01-07 03:35:20,775] [pool-1-thread-5] Initializing /data/converted/sebastien/F1.tif: [testng] [2025-01-07 03:35:22,778] [pool-1-thread-1] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2025-01-07 03:35:23,824] [pool-1-thread-12] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2025-01-07 03:35:24,846] [pool-1-thread-4] Initializing /data/converted/michel/c.tif: [testng] [2025-01-07 03:35:32,438] [pool-1-thread-8] Initializing /data/converted/lior/live+cf5b.tif: [testng] [2025-01-07 03:35:40,400] [pool-1-thread-12] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2025-01-07 03:35:42,412] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2025-01-07 03:35:47,675] [pool-1-thread-9] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2025-01-07 03:35:48,704] [pool-1-thread-4] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2025-01-07 03:36:03,596] [pool-1-thread-8] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] [2025-01-07 03:36:11,808] [pool-1-thread-4] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2025-01-07 03:36:20,384] [pool-1-thread-8] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2025-01-07 03:36:39,197] [pool-1-thread-4] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2025-01-07 03:36:42,858] [pool-1-thread-8] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] [2025-01-07 03:37:21,991] [pool-1-thread-7] Initializing /data/converted/stephan/notok2.tif: [testng] [2025-01-07 03:37:41,705] [pool-1-thread-5] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2025-01-07 03:37:49,757] [pool-1-thread-10] Initializing /data/converted/othmar/mozaic.tif: [testng] [2025-01-07 03:38:00,173] [pool-1-thread-4] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] [2025-01-07 03:38:05,736] [pool-1-thread-5] Initializing /data/converted/karsten/Bild2.tif: [testng] [2025-01-07 03:38:25,305] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2025-01-07 03:38:33,399] [pool-1-thread-7] Initializing /data/converted/michel/d.tif: [testng] [2025-01-07 03:38:54,728] [pool-1-thread-7] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2025-01-07 03:39:25,507] [pool-1-thread-9] Initializing /data/converted/karsten/Bild1.tif: [testng] [2025-01-07 03:39:48,287] [pool-1-thread-9] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2025-01-07 03:40:01,879] [pool-1-thread-3] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2025-01-07 03:40:24,599] [pool-1-thread-10] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2025-01-07 03:40:29,519] [pool-1-thread-3] Initializing /data/scott/Slide133-01.tif: [testng] [2025-01-07 03:40:37,157] [pool-1-thread-11] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] [2025-01-07 03:40:56,172] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2025-01-07 03:41:01,143] [pool-1-thread-10] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2025-01-07 03:41:07,080] [pool-1-thread-3] Initializing /data/converted/michel/b.tif: [testng] [2025-01-07 03:41:18,900] [pool-1-thread-11] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2025-01-07 03:41:46,761] [pool-1-thread-3] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2025-01-07 03:42:17,538] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] [2025-01-07 03:43:14,986] [pool-1-thread-10] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] [2025-01-07 03:43:19,665] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2025-01-07 03:43:43,486] [pool-1-thread-1] Initializing /data/converted/converted/2chz.tif: [testng] [2025-01-07 03:43:51,758] [pool-1-thread-10] Initializing /data/converted/othmar/z-stack.tif: [testng] [2025-01-07 03:44:09,757] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2025-01-07 03:46:23,375] [pool-1-thread-5] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2025-01-07 03:47:04,127] [pool-1-thread-1] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2025-01-07 03:48:58,635] [pool-1-thread-7] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2025-01-07 03:49:36,556] [pool-1-thread-6] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2025-01-07 03:49:38,848] [pool-1-thread-9] Initializing /data/converted/dietmar/138.tif: [testng] [2025-01-07 03:49:53,861] [pool-1-thread-7] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2025-01-07 03:51:38,793] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2025-01-07 03:52:04,676] [pool-1-thread-11] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2025-01-07 03:52:57,868] [pool-1-thread-12] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2025-01-07 03:53:21,371] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2025-01-07 03:53:40,235] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2025-01-07 03:54:08,675] [pool-1-thread-7] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2025-01-07 03:56:00,125] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2025-01-07 03:57:54,192] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2025-01-07 03:58:29,184] [pool-1-thread-1] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2025-01-07 03:59:07,053] [pool-1-thread-1] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2025-01-07 03:59:36,343] [pool-1-thread-1] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2025-01-07 04:00:02,971] [pool-1-thread-1] Initializing /data/converted/converted/mri-stack.tif: [testng] [2025-01-07 04:00:15,801] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2025-01-07 04:00:27,106] [pool-1-thread-1] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] [2025-01-07 04:00:30,407] [pool-1-thread-2] Initializing /data/converted/kelsey/650x514BW.tif: [testng] [2025-01-07 04:00:40,836] [pool-1-thread-4] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2025-01-07 04:00:54,577] [pool-1-thread-2] Initializing /data/converted/michel/e.tif: [testng] [2025-01-07 04:00:58,571] [pool-1-thread-7] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2025-01-07 04:01:18,510] [pool-1-thread-6] Initializing /data/othmar/mozaic.tif: [testng] [2025-01-07 04:01:26,317] [pool-1-thread-7] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2025-01-07 04:01:47,859] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2025-01-07 04:01:55,109] [pool-1-thread-2] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2025-01-07 04:02:07,566] [pool-1-thread-12] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2025-01-07 04:02:21,760] [pool-1-thread-7] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] [2025-01-07 04:02:46,143] [pool-1-thread-11] Initializing /data/converted/converted/2chzt.tif: [testng] [2025-01-07 04:04:33,749] [pool-1-thread-5] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2025-01-07 04:05:00,378] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2025-01-07 04:05:25,190] [pool-1-thread-6] Initializing /data/converted/michel/a.tif: [testng] [2025-01-07 04:05:46,969] [pool-1-thread-9] Initializing /data/converted/vladan/vladan.tif: [testng] [2025-01-07 04:05:52,579] [pool-1-thread-6] Initializing /data/converted/stephan/notok1.tif: [testng] [2025-01-07 04:06:13,911] [pool-1-thread-7] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2025-01-07 04:07:53,020] [pool-1-thread-6] Initializing /data/converted/converted/damian.tif: [testng] [2025-01-07 04:08:09,523] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2025-01-07 04:08:20,881] [pool-1-thread-6] Initializing /data/converted/darren/section0002_w1.tif: [testng] [2025-01-07 04:08:54,019] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2025-01-07 04:10:32,833] [pool-1-thread-8] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2025-01-07 04:10:46,475] [pool-1-thread-7] Initializing /data/scott/Slide133-08.tif: [testng] [2025-01-07 04:11:18,874] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2025-01-07 04:12:04,725] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2025-01-07 04:12:18,050] [pool-1-thread-5] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] [2025-01-07 04:13:07,822] [pool-1-thread-2] Initializing /data/converted/dietmar/137.tif: [testng] [2025-01-07 04:14:29,703] [pool-1-thread-8] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2025-01-07 04:15:40,415] [pool-1-thread-10] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2025-01-07 04:17:47,615] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2025-01-07 04:18:00,776] [pool-1-thread-4] Initializing /data/scott/Slide133-04.tif: [testng] [2025-01-07 04:18:34,182] [pool-1-thread-4] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2025-01-07 04:19:04,462] [pool-1-thread-7] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2025-01-07 04:19:57,688] [pool-1-thread-5] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2025-01-07 04:20:03,179] [pool-1-thread-7] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2025-01-07 04:20:18,137] [pool-1-thread-7] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] [2025-01-07 04:20:31,459] [pool-1-thread-12] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] [2025-01-07 04:20:58,840] [pool-1-thread-4] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2025-01-07 04:21:05,575] [pool-1-thread-9] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2025-01-07 04:21:07,341] [pool-1-thread-12] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2025-01-07 04:21:27,319] [pool-1-thread-4] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2025-01-07 04:21:35,678] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2025-01-07 04:21:48,393] [pool-1-thread-2] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2025-01-07 04:22:01,563] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2025-01-07 04:26:48,511] [pool-1-thread-8] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2025-01-07 04:27:03,543] [pool-1-thread-6] Initializing /data/converted/kelsey/432x342BW.tif: [testng] [2025-01-07 04:27:27,332] [pool-1-thread-6] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2025-01-07 04:27:35,577] [pool-1-thread-8] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2025-01-07 04:27:51,997] [pool-1-thread-6] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] [2025-01-07 04:29:45,402] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2025-01-07 04:30:19,200] [pool-1-thread-9] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] 05:07:10,766 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 05:07:10,766 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:07:10,767 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-01-07_05-07-10.log] [testng] 05:07:10,768 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ddf5a69 - End of configuration. [testng] 05:10:01,066 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 05:10:01,066 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:10:01,068 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-01-07_05-10-01.log] [testng] 05:10:01,068 |-INFO in ch.qos.logback.core.sift.SiftProcessor@62b71cfa - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 97 minutes 41 seconds Finished: SUCCESS