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Started by upstream project "BIOFORMATS-test-repo" build number 312 originally caused by: Started by upstream project "Trigger" build number 334 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2 [BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins8659167588879349901.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 3 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_49420_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 00:47:39,676 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:47:39,678 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service. [testng] 00:47:39,678 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:47:39,679 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:47:39,679 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:47:39,679 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:47:39,680 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:47:39,680 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:47:39,680 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:47:39,681 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:47:39,681 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:47:39,681 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:47:39,854 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:47:39,854 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:47:39,875 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:47:39,876 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:47:39,881 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:47:39,881 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:47:39,881 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:47:39,881 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:47:39,881 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration. [testng] 00:47:39,882 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point [testng] 00:47:39,882 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 202 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-01-08 00:47:39,891] [main] java.version = 17.0.2 [testng] 00:47:39,894 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:47:39,894 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:47:39,933 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-01-08_00-47-39.log] [testng] 00:47:39,934 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration. [testng] [2025-01-08 00:47:39,936] [main] testng.directory = /data [testng] [2025-01-08 00:47:39,936] [main] testng.configDirectory = /config [testng] [2025-01-08 00:47:39,945] [main] testng.multiplier = 1.0 [testng] [2025-01-08 00:47:39,945] [main] testng.in-memory = false [testng] [2025-01-08 00:47:39,945] [main] testng.allow-missing = false [testng] [2025-01-08 00:47:39,946] [main] user.language = en [testng] [2025-01-08 00:47:39,946] [main] user.country = ${user.country} [testng] [2025-01-08 00:47:39,946] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2025-01-08 00:48:03,085] [main] ---------------------------------------- [testng] [2025-01-08 00:48:03,085] [main] Total files: 259 [testng] [2025-01-08 00:48:03,085] [main] Scan time: 23.139 s (89 ms/file) [testng] [2025-01-08 00:48:03,085] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-01-08 00:55:44,897] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] 00:55:44,898 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:55:44,898 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:44,899 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-01-08_00-55-44.log] [testng] 00:55:44,900 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3750b16a - End of configuration. [testng] [2025-01-08 00:55:45,633] [pool-1-thread-12] Initializing /data/stefan/yc2_live-03.oib: [testng] 00:55:45,633 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:55:45,633 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:45,634 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-01-08_00-55-45.log] [testng] 00:55:45,635 |-INFO in ch.qos.logback.core.sift.SiftProcessor@61f8351 - End of configuration. [testng] [2025-01-08 00:55:46,563] [pool-1-thread-11] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] 00:55:46,563 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:55:46,563 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:46,564 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-01-08_00-55-46.log] [testng] 00:55:46,565 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4352a7fc - End of configuration. [testng] [2025-01-08 00:55:46,984] [pool-1-thread-10] Initializing /data/pedro/plv-test.oib: [testng] 00:55:46,984 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:55:46,984 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:46,986 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-01-08_00-55-46.log] [testng] 00:55:46,986 |-INFO in ch.qos.logback.core.sift.SiftProcessor@38a39334 - End of configuration. [testng] [2025-01-08 00:55:47,359] [pool-1-thread-9] Initializing /data/qa-17748/Image0098.oib: [testng] 00:55:47,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:55:47,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:47,360 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-01-08_00-55-47.log] [testng] 00:55:47,361 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37c15a9f - End of configuration. [testng] [2025-01-08 00:55:47,774] [pool-1-thread-8] Initializing /data/christian/20min.oif: [testng] 00:55:47,774 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:55:47,775 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:47,775 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-01-08_00-55-47.log] [testng] 00:55:47,775 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6ee5b0c7 - End of configuration. [testng] [2025-01-08 00:55:48,181] [pool-1-thread-7] Initializing /data/brian/Kaede15.oib: [testng] 00:55:48,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:55:48,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:48,182 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-01-08_00-55-48.log] [testng] 00:55:48,182 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41ac9d44 - End of configuration. [testng] [2025-01-08 00:55:48,828] [pool-1-thread-6] Initializing /data/simon/never_worked.oib: [testng] 00:55:48,828 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:55:48,828 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:48,829 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-01-08_00-55-48.log] [testng] 00:55:48,829 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d90189d - End of configuration. [testng] [2025-01-08 00:55:49,261] [pool-1-thread-5] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] 00:55:49,261 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:55:49,261 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:49,262 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-01-08_00-55-49.log] [testng] 00:55:49,262 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d87af9c - End of configuration. [testng] [2025-01-08 00:55:49,708] [pool-1-thread-4] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] 00:55:49,708 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:55:49,708 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:49,709 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-01-08_00-55-49.log] [testng] 00:55:49,709 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3b535d62 - End of configuration. [testng] [2025-01-08 00:55:55,119] [pool-1-thread-3] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] 00:55:55,120 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:55:55,120 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:55,120 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-01-08_00-55-55.log] [testng] 00:55:55,121 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37e05dad - End of configuration. [testng] [2025-01-08 00:55:55,579] [pool-1-thread-2] Initializing /data/glen/Image0002.oif: [testng] 00:55:55,579 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:55:55,579 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:55,580 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-01-08_00-55-55.log] [testng] 00:55:55,580 |-INFO in ch.qos.logback.core.sift.SiftProcessor@de6a1c7 - End of configuration. [testng] [2025-01-08 00:56:03,459] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2025-01-08 00:56:04,154] [pool-1-thread-11] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2025-01-08 00:56:06,578] [pool-1-thread-5] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2025-01-08 00:56:07,070] [pool-1-thread-10] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2025-01-08 00:56:09,076] [pool-1-thread-6] Initializing /data/molly/11OCT2.OIF: [testng] [2025-01-08 00:56:28,730] [pool-1-thread-3] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2025-01-08 00:56:29,360] [pool-1-thread-7] Initializing /data/aryeh/control_test.oib: [testng] [2025-01-08 00:56:32,661] [pool-1-thread-1] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2025-01-08 00:56:34,389] [pool-1-thread-12] Initializing /data/johannes/step4.bmp: [testng] [2025-01-08 00:56:37,170] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2025-01-08 00:56:38,593] [pool-1-thread-5] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2025-01-08 00:56:42,849] [pool-1-thread-3] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] [2025-01-08 00:56:44,970] [pool-1-thread-9] Initializing /data/glen/notsaturated.oib: [testng] [2025-01-08 00:56:48,510] [pool-1-thread-8] Initializing /data/glen/111407.oif: [testng] [2025-01-08 00:56:52,039] [pool-1-thread-12] Initializing /data/glen/singlesimul.oif: [testng] [2025-01-08 00:56:55,774] [pool-1-thread-9] Initializing /data/brian/lambda02nm.oib: [testng] [2025-01-08 00:57:00,781] [pool-1-thread-9] Initializing /data/yoshihito/XY.oib: [testng] [2025-01-08 00:57:04,556] [pool-1-thread-7] Initializing /data/aryeh/030408 2 1.oib: [testng] [2025-01-08 00:57:05,933] [pool-1-thread-9] Initializing /data/glen/simulstack.oif: [testng] [2025-01-08 00:57:15,732] [pool-1-thread-7] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2025-01-08 00:57:18,269] [pool-1-thread-5] Initializing /data/qa-17748/Image0079.oib: [testng] [2025-01-08 00:57:22,466] [pool-1-thread-5] Initializing /data/molly/11OCT7.OIF: [testng] [2025-01-08 00:57:37,806] [pool-1-thread-7] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2025-01-08 00:57:43,405] [pool-1-thread-12] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2025-01-08 00:57:58,077] [pool-1-thread-12] Initializing /data/yoshihito/XY.oif: [testng] [2025-01-08 00:58:14,492] [pool-1-thread-7] Initializing /data/molly/11OCT5.OIF: [testng] [2025-01-08 00:58:34,815] [pool-1-thread-12] Initializing /data/simon/used_to_work.oib: [testng] [2025-01-08 00:58:42,127] [pool-1-thread-12] Initializing /data/stefan/cytosol_03e.oib: [testng] [2025-01-08 00:58:50,293] [pool-1-thread-12] Initializing /data/molly/11OCT9.OIF: [testng] [2025-01-08 01:05:25,449] [pool-1-thread-10] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2025-01-08 01:05:31,165] [pool-1-thread-10] Initializing /data/brian/CFP-GFP2.oib: [testng] [2025-01-08 01:05:37,324] [pool-1-thread-10] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2025-01-08 01:05:44,121] [pool-1-thread-10] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2025-01-08 01:05:49,982] [pool-1-thread-10] Initializing /data/yasunori/series_1.oib: [testng] [2025-01-08 01:05:57,472] [pool-1-thread-10] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2025-01-08 01:06:04,325] [pool-1-thread-10] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2025-01-08 01:06:11,466] [pool-1-thread-10] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] [2025-01-08 01:06:19,686] [pool-1-thread-10] Initializing /data/molly/11OCT11.OIF: [testng] [2025-01-08 01:07:43,944] [pool-1-thread-3] Initializing /data/glen/seqlinestack.oib: [testng] [2025-01-08 01:07:52,332] [pool-1-thread-3] Initializing /data/michael/CELL3.oib: [testng] [2025-01-08 01:08:01,700] [pool-1-thread-3] Initializing /data/molly/11OCT3.OIF: [testng] [2025-01-08 01:09:33,099] [pool-1-thread-1] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2025-01-08 01:10:43,702] [pool-1-thread-1] Initializing /data/chris/missegragation-15.oib: [testng] [2025-01-08 01:11:20,480] [pool-1-thread-1] Initializing /data/glen/simulstack.oib: [testng] [2025-01-08 01:11:53,237] [pool-1-thread-1] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] [2025-01-08 01:12:37,881] [pool-1-thread-1] Initializing /data/aryeh/1h.oib: [testng] [2025-01-08 01:13:05,823] [pool-1-thread-1] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2025-01-08 01:13:45,325] [pool-1-thread-1] Initializing /data/glen/singleseqline.oib: [testng] [2025-01-08 01:13:52,020] [pool-1-thread-1] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2025-01-08 01:15:02,815] [pool-1-thread-11] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2025-01-08 01:15:08,569] [pool-1-thread-11] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2025-01-08 01:15:11,062] [pool-1-thread-8] Initializing /data/jae/Image0001.oib: [testng] [2025-01-08 01:15:16,839] [pool-1-thread-8] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] [2025-01-08 01:15:36,441] [pool-1-thread-9] Initializing /data/johannes/step1.bmp: [testng] [2025-01-08 01:15:39,795] [pool-1-thread-9] Initializing /data/molly/11OCT4.OIF: [testng] [2025-01-08 01:16:42,883] [pool-1-thread-8] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2025-01-08 01:16:45,108] [pool-1-thread-8] Initializing /data/brian/FLIP.oib: [testng] [2025-01-08 01:16:48,912] [pool-1-thread-2] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2025-01-08 01:16:54,519] [pool-1-thread-8] Initializing /data/stefan/cytosol_08b.oif: [testng] [2025-01-08 01:17:06,151] [pool-1-thread-2] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2025-01-08 01:17:14,248] [pool-1-thread-2] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] [2025-01-08 01:17:23,166] [pool-1-thread-2] Initializing /data/david/Image0016.oib: [testng] [2025-01-08 01:17:30,693] [pool-1-thread-2] Initializing /data/stefan/cytosol_01a.oif: [testng] [2025-01-08 01:20:16,157] [pool-1-thread-11] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2025-01-08 01:20:29,907] [pool-1-thread-11] Initializing /data/marc/V0606L.oib: [testng] [2025-01-08 01:20:55,685] [pool-1-thread-11] Initializing /data/glen/singleseqline.oif: [testng] [2025-01-08 01:22:26,068] [pool-1-thread-11] Initializing /data/glen/singleseqframe.oib: [testng] [2025-01-08 01:22:33,997] [pool-1-thread-11] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2025-01-08 01:22:42,111] [pool-1-thread-11] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2025-01-08 01:23:50,349] [pool-1-thread-5] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2025-01-08 01:24:02,871] [pool-1-thread-5] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2025-01-08 01:24:12,940] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] [2025-01-08 01:24:24,595] [pool-1-thread-5] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2025-01-08 01:24:34,349] [pool-1-thread-5] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2025-01-08 01:24:44,164] [pool-1-thread-5] Initializing /data/glen/notsaturated.oif: [testng] [2025-01-08 01:26:21,095] [pool-1-thread-7] Initializing /data/johannes/step3.bmp: [testng] [2025-01-08 01:26:24,353] [pool-1-thread-7] Initializing /data/molly/11OCT6.OIF: [testng] [2025-01-08 01:27:58,209] [pool-1-thread-11] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2025-01-08 01:28:03,450] [pool-1-thread-11] Initializing /data/glen/singlesimul.oib: [testng] [2025-01-08 01:28:07,604] [pool-1-thread-11] Initializing /data/sten/01.oib: [testng] [2025-01-08 01:28:13,915] [pool-1-thread-11] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2025-01-08 01:28:18,509] [pool-1-thread-11] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2025-01-08 01:29:17,708] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2025-01-08 01:29:25,232] [pool-1-thread-11] Initializing /data/brian/PA-GFP-3.oib: [testng] [2025-01-08 01:29:32,802] [pool-1-thread-11] Initializing /data/glen/4205basal106072.oif: [testng] [2025-01-08 01:34:10,492] [pool-1-thread-4] Initializing /data/brian/Lambda10nm.oib: [testng] [2025-01-08 01:34:19,644] [pool-1-thread-4] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2025-01-08 01:34:23,975] [pool-1-thread-1] Initializing /data/glen/Null file/test change.oif: [testng] [2025-01-08 01:34:30,425] [pool-1-thread-4] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] [2025-01-08 01:34:41,035] [pool-1-thread-4] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2025-01-08 01:34:49,563] [pool-1-thread-4] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2025-01-08 01:35:28,868] [pool-1-thread-1] Initializing /data/david/Image0016.oif: [testng] [2025-01-08 01:36:08,546] [pool-1-thread-5] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2025-01-08 01:36:15,943] [pool-1-thread-5] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2025-01-08 01:36:23,492] [pool-1-thread-5] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2025-01-08 01:36:31,346] [pool-1-thread-5] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2025-01-08 01:36:38,085] [pool-1-thread-5] Initializing /data/karl/Image0009.oib: [testng] [2025-01-08 01:36:44,386] [pool-1-thread-5] Initializing /data/kay/IM2pg.oib: [testng] [2025-01-08 01:36:52,882] [pool-1-thread-5] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2025-01-08 01:37:00,280] [pool-1-thread-5] Initializing /data/tom/RGB-1.avi: [testng] [2025-01-08 01:37:04,311] [pool-1-thread-5] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2025-01-08 01:37:09,925] [pool-1-thread-5] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2025-01-08 01:37:24,653] [pool-1-thread-1] Initializing /data/molly/11OCT10.OIF: [testng] [2025-01-08 01:40:38,581] [pool-1-thread-5] Initializing /data/glen/seqlinestack.oif: [testng] [2025-01-08 01:42:18,280] [pool-1-thread-10] Initializing /data/glen/singleseqframe.oif: [testng] [2025-01-08 01:43:06,122] [pool-1-thread-10] Initializing /data/johannes/step5b.bmp: [testng] [2025-01-08 01:43:08,359] [pool-1-thread-10] Initializing /data/tom/zseries-test.oib: [testng] [2025-01-08 01:43:16,949] [pool-1-thread-10] Initializing /data/monica/Image0056.oif: [testng] [2025-01-08 01:43:26,374] [pool-1-thread-9] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2025-01-08 01:43:30,972] [pool-1-thread-9] Initializing /data/francesco/fGfp.c15.oib: [testng] [2025-01-08 01:43:36,404] [pool-1-thread-9] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2025-01-08 01:44:04,577] [pool-1-thread-10] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2025-01-08 01:44:10,535] [pool-1-thread-10] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2025-01-08 01:44:22,720] [pool-1-thread-10] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2025-01-08 01:44:29,492] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2025-01-08 01:44:37,338] [pool-1-thread-10] Initializing /data/johannes/step2.bmp: [testng] [2025-01-08 01:44:39,682] [pool-1-thread-10] Initializing /data/marc/V0606J.oib: [testng] [2025-01-08 01:45:03,373] [pool-1-thread-10] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2025-01-08 01:45:10,109] [pool-1-thread-10] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2025-01-08 01:46:39,549] [pool-1-thread-6] Initializing /data/allan/62909#1.oib: [testng] [2025-01-08 01:46:46,549] [pool-1-thread-6] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2025-01-08 01:46:53,945] [pool-1-thread-6] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] [2025-01-08 01:47:40,997] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2025-01-08 01:47:49,653] [pool-1-thread-6] Initializing /data/glen/Null file/test no change.oif: [testng] [2025-01-08 01:48:30,532] [pool-1-thread-6] Initializing /data/johannes/step4b.bmp: [testng] [2025-01-08 01:48:34,180] [pool-1-thread-6] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2025-01-08 01:48:39,814] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2025-01-08 01:48:42,487] [pool-1-thread-9] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2025-01-08 01:49:34,218] [pool-1-thread-6] Initializing /data/molly/11OCT8.OIF: [testng] [2025-01-08 01:49:53,677] [pool-1-thread-10] Initializing /data/brian/LILY POLLEN.oib: [testng] [2025-01-08 01:49:57,834] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2025-01-08 01:50:02,086] [pool-1-thread-10] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] 02:57:35,562 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:57:35,562 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:57:35,563 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-01-08_02-57-35.log] [testng] 02:57:35,563 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c1d208 - End of configuration. [testng] 03:04:34,233 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:04:34,233 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:04:34,235 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-01-08_03-04-34.log] [testng] 03:04:34,235 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6ac3ceda - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 136 minutes 57 seconds Finished: SUCCESS