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Started by upstream project "BIOFORMATS-test-repo" build number 312 originally caused by: Started by upstream project "Trigger" build number 334 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4 [BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins14728502217569853524.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 3 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_49507_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 03:44:50,482 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 03:44:50,483 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service. [testng] 03:44:50,483 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:44:50,484 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:44:50,484 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 03:44:50,485 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 03:44:50,485 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 03:44:50,485 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:44:50,485 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:44:50,486 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 03:44:50,486 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 03:44:50,486 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 03:44:50,642 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 03:44:50,642 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 03:44:50,662 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 03:44:50,662 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 03:44:50,667 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 03:44:50,667 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 03:44:50,667 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 03:44:50,668 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 03:44:50,668 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration. [testng] 03:44:50,669 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point [testng] 03:44:50,669 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 184 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-01-08 03:44:50,677] [main] java.version = 17.0.2 [testng] 03:44:50,680 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:44:50,680 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:44:50,719 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-01-08_03-44-50.log] [testng] 03:44:50,720 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration. [testng] [2025-01-08 03:44:50,721] [main] testng.directory = /data [testng] [2025-01-08 03:44:50,722] [main] testng.configDirectory = /config [testng] [2025-01-08 03:44:50,730] [main] testng.multiplier = 1.0 [testng] [2025-01-08 03:44:50,730] [main] testng.in-memory = false [testng] [2025-01-08 03:44:50,731] [main] testng.allow-missing = false [testng] [2025-01-08 03:44:50,731] [main] user.language = en [testng] [2025-01-08 03:44:50,731] [main] user.country = ${user.country} [testng] [2025-01-08 03:44:50,731] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2025-01-08 03:46:42,283] [main] ---------------------------------------- [testng] [2025-01-08 03:46:42,283] [main] Total files: 15735 [testng] [2025-01-08 03:46:42,284] [main] Scan time: 111.552 s (7 ms/file) [testng] [2025-01-08 03:46:42,284] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-01-08 03:47:55,693] [pool-1-thread-1] Initializing /data/converted/stephan/notok1.tif: [testng] 03:47:55,694 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 03:47:55,694 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:47:55,695 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-01-08_03-47-55.log] [testng] 03:47:55,695 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1a9a7e2d - End of configuration. [testng] [2025-01-08 03:47:56,237] [pool-1-thread-12] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] 03:47:56,237 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 03:47:56,237 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:47:56,238 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-01-08_03-47-56.log] [testng] 03:47:56,239 |-INFO in ch.qos.logback.core.sift.SiftProcessor@53cd2c18 - End of configuration. [testng] [2025-01-08 03:47:56,508] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] 03:47:56,508 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 03:47:56,508 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:47:56,509 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-01-08_03-47-56.log] [testng] 03:47:56,510 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7a99d5a5 - End of configuration. [testng] [2025-01-08 03:47:57,006] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] 03:47:57,006 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 03:47:57,006 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:47:57,007 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-01-08_03-47-57.log] [testng] 03:47:57,007 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2fe64e41 - End of configuration. [testng] [2025-01-08 03:47:57,396] [pool-1-thread-9] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] 03:47:57,396 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 03:47:57,396 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:47:57,396 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-01-08_03-47-57.log] [testng] 03:47:57,397 |-INFO in ch.qos.logback.core.sift.SiftProcessor@73abb052 - End of configuration. [testng] [2025-01-08 03:47:58,283] [pool-1-thread-8] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] 03:47:58,283 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 03:47:58,283 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:47:58,284 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-01-08_03-47-58.log] [testng] 03:47:58,284 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ee283f1 - End of configuration. [testng] [2025-01-08 03:47:58,501] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] 03:47:58,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 03:47:58,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:47:58,501 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-01-08_03-47-58.log] [testng] 03:47:58,502 |-INFO in ch.qos.logback.core.sift.SiftProcessor@242584b0 - End of configuration. [testng] [2025-01-08 03:47:58,896] [pool-1-thread-6] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] 03:47:58,896 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 03:47:58,896 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:47:58,897 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-01-08_03-47-58.log] [testng] 03:47:58,897 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4fce121a - End of configuration. [testng] [2025-01-08 03:47:59,118] [pool-1-thread-5] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] 03:47:59,118 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 03:47:59,118 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:47:59,119 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-01-08_03-47-59.log] [testng] 03:47:59,119 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5344bca7 - End of configuration. [testng] [2025-01-08 03:47:59,359] [pool-1-thread-4] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] 03:47:59,360 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 03:47:59,360 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:47:59,360 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-01-08_03-47-59.log] [testng] 03:47:59,360 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37cda7e8 - End of configuration. [testng] [2025-01-08 03:47:59,567] [pool-1-thread-3] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] 03:47:59,567 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 03:47:59,568 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:47:59,568 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-01-08_03-47-59.log] [testng] 03:47:59,569 |-INFO in ch.qos.logback.core.sift.SiftProcessor@43e9a197 - End of configuration. [testng] [2025-01-08 03:48:00,140] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] 03:48:00,140 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 03:48:00,140 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:48:00,141 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-01-08_03-48-00.log] [testng] 03:48:00,141 |-INFO in ch.qos.logback.core.sift.SiftProcessor@124f602b - End of configuration. [testng] [2025-01-08 03:48:12,357] [pool-1-thread-12] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2025-01-08 03:48:18,424] [pool-1-thread-4] Initializing /data/scott/Slide133-11.tif: [testng] [2025-01-08 03:48:19,168] [pool-1-thread-6] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2025-01-08 03:48:29,232] [pool-1-thread-12] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] [2025-01-08 03:48:31,725] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2025-01-08 03:48:34,416] [pool-1-thread-6] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2025-01-08 03:48:35,608] [pool-1-thread-4] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2025-01-08 03:48:52,933] [pool-1-thread-6] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2025-01-08 03:49:01,171] [pool-1-thread-1] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2025-01-08 03:49:31,048] [pool-1-thread-5] Initializing /data/converted/dietmar/137.tif: [testng] [2025-01-08 03:49:38,617] [pool-1-thread-4] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2025-01-08 03:50:25,248] [pool-1-thread-12] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2025-01-08 03:50:38,163] [pool-1-thread-12] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2025-01-08 03:50:58,836] [pool-1-thread-12] Initializing /data/converted/dietmar/138.tif: [testng] [2025-01-08 03:52:44,825] [pool-1-thread-11] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2025-01-08 03:53:08,522] [pool-1-thread-10] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2025-01-08 03:53:55,508] [pool-1-thread-2] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2025-01-08 03:54:13,257] [pool-1-thread-7] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] [2025-01-08 03:54:54,633] [pool-1-thread-8] Initializing /data/converted/michel/d.tif: [testng] [2025-01-08 03:55:29,658] [pool-1-thread-8] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2025-01-08 03:56:01,378] [pool-1-thread-8] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] [2025-01-08 03:56:32,563] [pool-1-thread-8] Initializing /data/converted/darren/section0002_w1.tif: [testng] [2025-01-08 03:56:39,873] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2025-01-08 03:57:05,898] [pool-1-thread-3] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2025-01-08 03:57:07,504] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2025-01-08 03:57:09,760] [pool-1-thread-6] Initializing /data/converted/converted/damian.tif: [testng] [2025-01-08 03:57:36,537] [pool-1-thread-6] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2025-01-08 03:57:48,698] [pool-1-thread-11] Initializing /data/converted/michel/e.tif: [testng] [2025-01-08 03:58:28,475] [pool-1-thread-7] Initializing /data/scott/Slide133-08.tif: [testng] [2025-01-08 03:58:47,660] [pool-1-thread-11] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2025-01-08 03:58:54,940] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2025-01-08 03:58:58,903] [pool-1-thread-7] Initializing /data/converted/stephan/notok2.tif: [testng] [2025-01-08 03:59:29,999] [pool-1-thread-12] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2025-01-08 03:59:44,805] [pool-1-thread-11] Initializing /data/converted/lior/live+cf5b.tif: [testng] [2025-01-08 04:00:35,999] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2025-01-08 04:00:57,545] [pool-1-thread-7] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2025-01-08 04:01:37,633] [pool-1-thread-12] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2025-01-08 04:01:43,291] [pool-1-thread-7] Initializing /data/scott/Slide133-01.tif: [testng] [2025-01-08 04:02:03,071] [pool-1-thread-12] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2025-01-08 04:02:07,921] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2025-01-08 04:02:25,342] [pool-1-thread-12] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2025-01-08 04:02:52,612] [pool-1-thread-3] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2025-01-08 04:03:40,301] [pool-1-thread-9] Initializing /data/converted/michel/a.tif: [testng] [2025-01-08 04:03:54,320] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2025-01-08 04:04:02,320] [pool-1-thread-9] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2025-01-08 04:04:28,448] [pool-1-thread-8] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2025-01-08 04:04:48,834] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2025-01-08 04:05:13,322] [pool-1-thread-8] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2025-01-08 04:05:45,004] [pool-1-thread-4] Initializing /data/converted/kelsey/432x342BW.tif: [testng] [2025-01-08 04:05:49,737] [pool-1-thread-1] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] [2025-01-08 04:06:15,977] [pool-1-thread-4] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2025-01-08 04:06:32,117] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2025-01-08 04:06:43,997] [pool-1-thread-4] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2025-01-08 04:06:54,640] [pool-1-thread-6] Initializing /data/converted/converted/2chz.tif: [testng] [2025-01-08 04:07:17,028] [pool-1-thread-4] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2025-01-08 04:08:54,098] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2025-01-08 04:10:07,312] [pool-1-thread-7] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] [2025-01-08 04:10:29,641] [pool-1-thread-6] Initializing /data/othmar/mozaic.tif: [testng] [2025-01-08 04:11:45,946] [pool-1-thread-8] Initializing /data/converted/othmar/z-stack.tif: [testng] [2025-01-08 04:12:06,754] [pool-1-thread-4] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] [2025-01-08 04:12:37,667] [pool-1-thread-4] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2025-01-08 04:12:39,274] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2025-01-08 04:13:46,366] [pool-1-thread-1] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2025-01-08 04:13:50,945] [pool-1-thread-5] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2025-01-08 04:14:07,038] [pool-1-thread-4] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] [2025-01-08 04:15:48,370] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2025-01-08 04:17:29,904] [pool-1-thread-9] Initializing /data/converted/converted/2chzt.tif: [testng] [2025-01-08 04:19:39,680] [pool-1-thread-11] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2025-01-08 04:24:02,365] [pool-1-thread-12] Initializing /data/converted/sebastien/F1.tif: [testng] [2025-01-08 04:24:07,460] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2025-01-08 04:28:08,871] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2025-01-08 04:28:52,993] [pool-1-thread-1] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2025-01-08 04:29:00,619] [pool-1-thread-3] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2025-01-08 04:29:48,305] [pool-1-thread-12] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2025-01-08 04:30:46,638] [pool-1-thread-12] Initializing /data/scott/Slide133-04.tif: [testng] [2025-01-08 04:31:24,012] [pool-1-thread-12] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2025-01-08 04:31:40,066] [pool-1-thread-1] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] [2025-01-08 04:32:36,343] [pool-1-thread-1] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2025-01-08 04:33:26,855] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2025-01-08 04:34:53,033] [pool-1-thread-8] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] [2025-01-08 04:36:05,845] [pool-1-thread-10] Initializing /data/converted/dan/adultnr1.tif: [testng] [2025-01-08 04:36:24,535] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2025-01-08 04:37:31,168] [pool-1-thread-12] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2025-01-08 04:37:38,937] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2025-01-08 04:39:56,850] [pool-1-thread-6] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2025-01-08 04:41:33,368] [pool-1-thread-6] Initializing /data/converted/karsten/Bild1.tif: [testng] [2025-01-08 04:42:22,869] [pool-1-thread-6] Initializing /data/converted/kelsey/650x514BW.tif: [testng] [2025-01-08 04:42:53,967] [pool-1-thread-6] Initializing /data/converted/converted/mri-stack.tif: [testng] [2025-01-08 04:43:23,690] [pool-1-thread-6] Initializing /data/converted/sebastien/test.tif: [testng] [2025-01-08 04:44:44,674] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2025-01-08 04:45:18,060] [pool-1-thread-11] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] [2025-01-08 04:47:05,356] [pool-1-thread-8] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2025-01-08 04:47:07,296] [pool-1-thread-10] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2025-01-08 04:47:40,083] [pool-1-thread-8] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2025-01-08 04:49:32,779] [pool-1-thread-4] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2025-01-08 04:50:51,215] [pool-1-thread-8] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2025-01-08 04:51:25,304] [pool-1-thread-8] Initializing /data/converted/michel/b.tif: [testng] [2025-01-08 04:51:42,716] [pool-1-thread-10] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2025-01-08 04:52:12,879] [pool-1-thread-8] Initializing /data/converted/nicolas/image.tif: [testng] [2025-01-08 04:52:39,577] [pool-1-thread-8] Initializing /data/converted/vladan/vladan.tif: [testng] [2025-01-08 04:53:06,076] [pool-1-thread-11] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2025-01-08 04:53:24,439] [pool-1-thread-11] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2025-01-08 04:53:33,942] [pool-1-thread-6] Initializing /data/converted/karsten/Bild2.tif: [testng] [2025-01-08 04:53:48,368] [pool-1-thread-1] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2025-01-08 04:54:21,706] [pool-1-thread-1] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] [2025-01-08 04:54:25,557] [pool-1-thread-6] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2025-01-08 04:54:50,966] [pool-1-thread-6] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2025-01-08 04:54:55,886] [pool-1-thread-1] Initializing /data/converted/othmar/mozaic.tif: [testng] [2025-01-08 04:55:28,843] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2025-01-08 04:58:04,917] [pool-1-thread-7] Initializing /data/converted/michel/c.tif: [testng] [2025-01-08 04:58:53,505] [pool-1-thread-7] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2025-01-08 04:59:35,352] [pool-1-thread-7] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2025-01-08 04:59:43,871] [pool-1-thread-1] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] 05:05:29,258 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 05:05:29,258 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:05:29,259 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-01-08_05-05-29.log] [testng] 05:05:29,259 |-INFO in ch.qos.logback.core.sift.SiftProcessor@413322af - End of configuration. [testng] 05:42:52,030 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 05:42:52,030 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:42:52,033 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-01-08_05-42-52.log] [testng] 05:42:52,033 |-INFO in ch.qos.logback.core.sift.SiftProcessor@475a1228 - End of configuration. [testng] 05:45:40,408 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 05:45:40,408 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:45:40,410 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-01-08_05-45-40.log] [testng] 05:45:40,410 |-INFO in ch.qos.logback.core.sift.SiftProcessor@445760e0 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 120 minutes 55 seconds Finished: SUCCESS