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Started by upstream project "BIOFORMATS-test-repo" build number 313 originally caused by: Started by upstream project "Trigger" build number 335 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins11722358350861816010.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_49545_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:15:23,394 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:15:23,395 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - No custom configurators were discovered as a service. [testng] 01:15:23,395 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:15:23,396 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:15:23,396 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:15:23,397 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:15:23,397 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:15:23,397 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:15:23,398 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:15:23,398 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:15:23,398 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:15:23,399 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:15:23,564 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:15:23,564 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:15:23,594 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:15:23,594 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:15:23,600 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:15:23,600 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:15:23,600 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:15:23,600 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:15:23,600 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@29215f06 - End of configuration. [testng] 01:15:23,601 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@b9b00e0 - Registering current configuration as safe fallback point [testng] 01:15:23,601 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 203 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-01-09 01:15:23,610] [main] java.version = 21 [testng] 01:15:23,613 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:15:23,613 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:15:23,654 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-01-09_01-15-23.log] [testng] 01:15:23,656 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b919693 - End of configuration. [testng] [2025-01-09 01:15:23,657] [main] testng.directory = /data [testng] [2025-01-09 01:15:23,657] [main] testng.configDirectory = /config [testng] [2025-01-09 01:15:23,666] [main] testng.multiplier = 1.0 [testng] [2025-01-09 01:15:23,666] [main] testng.in-memory = false [testng] [2025-01-09 01:15:23,666] [main] testng.allow-missing = false [testng] [2025-01-09 01:15:23,667] [main] user.language = en [testng] [2025-01-09 01:15:23,667] [main] user.country = ${user.country} [testng] [2025-01-09 01:15:23,667] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2025-01-09 01:15:26,774] [main] ---------------------------------------- [testng] [2025-01-09 01:15:26,774] [main] Total files: 103 [testng] [2025-01-09 01:15:26,775] [main] Scan time: 3.107 s (30 ms/file) [testng] [2025-01-09 01:15:26,775] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-01-09 01:15:42,744] [pool-1-thread-1] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] 01:15:42,745 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:15:42,745 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:15:42,746 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-01-09_01-15-42.log] [testng] 01:15:42,747 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2862762f - End of configuration. [testng] [2025-01-09 01:15:42,801] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] 01:15:42,802 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:15:42,802 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:15:42,803 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-01-09_01-15-42.log] [testng] 01:15:42,811 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f156d15 - End of configuration. [testng] [2025-01-09 01:15:42,877] [pool-1-thread-11] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] 01:15:42,877 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:15:42,878 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:15:42,879 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-01-09_01-15-42.log] [testng] 01:15:42,879 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1661ae02 - End of configuration. [testng] [2025-01-09 01:15:42,935] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] 01:15:42,935 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:15:42,935 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:15:42,936 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-01-09_01-15-42.log] [testng] 01:15:42,937 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5ebd0634 - End of configuration. [testng] [2025-01-09 01:15:43,017] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] 01:15:43,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:15:43,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:15:43,018 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-01-09_01-15-43.log] [testng] 01:15:43,019 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3060cb5f - End of configuration. [testng] [2025-01-09 01:15:43,107] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] 01:15:43,107 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:15:43,107 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:15:43,108 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-01-09_01-15-43.log] [testng] 01:15:43,109 |-INFO in ch.qos.logback.core.sift.SiftProcessor@28a38845 - End of configuration. [testng] [2025-01-09 01:15:43,169] [pool-1-thread-7] Initializing /data/jay/DMtest2.dm3: [testng] 01:15:43,169 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:15:43,170 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:15:43,171 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-01-09_01-15-43.log] [testng] 01:15:43,171 |-INFO in ch.qos.logback.core.sift.SiftProcessor@90076a9 - End of configuration. [testng] [2025-01-09 01:15:43,305] [pool-1-thread-6] Initializing /data/chip/Nanogold-1.dm3: [testng] 01:15:43,305 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:15:43,306 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:15:43,306 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-01-09_01-15-43.log] [testng] 01:15:43,307 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3eea9e3a - End of configuration. [testng] [2025-01-09 01:15:43,686] [pool-1-thread-5] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] 01:15:43,686 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:15:43,687 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:15:43,687 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-01-09_01-15-43.log] [testng] 01:15:43,688 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f2cc012 - End of configuration. [testng] [2025-01-09 01:15:44,014] [pool-1-thread-4] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] 01:15:44,014 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:15:44,014 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:15:44,015 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-01-09_01-15-44.log] [testng] 01:15:44,015 |-INFO in ch.qos.logback.core.sift.SiftProcessor@671da89c - End of configuration. [testng] [2025-01-09 01:15:44,052] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] 01:15:44,053 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:15:44,053 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:15:44,054 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-01-09_01-15-44.log] [testng] 01:15:44,054 |-INFO in ch.qos.logback.core.sift.SiftProcessor@ed9c18d - End of configuration. [testng] [2025-01-09 01:15:44,087] [pool-1-thread-2] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] 01:15:44,087 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:15:44,087 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:15:44,088 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-01-09_01-15-44.log] [testng] 01:15:44,088 |-INFO in ch.qos.logback.core.sift.SiftProcessor@344708d2 - End of configuration. [testng] [2025-01-09 01:15:46,665] [pool-1-thread-9] Initializing /data/jay/dnasample.tif: [testng] [2025-01-09 01:15:48,051] [pool-1-thread-1] Initializing /data/ofra/lowloss.dm3: [testng] [2025-01-09 01:15:48,618] [pool-1-thread-8] Initializing /data/jay/smallerfile.dm3: [testng] [2025-01-09 01:15:48,728] [pool-1-thread-10] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] [2025-01-09 01:15:48,880] [pool-1-thread-3] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2025-01-09 01:15:49,100] [pool-1-thread-7] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2025-01-09 01:15:49,395] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e4.tif: [testng] [2025-01-09 01:15:50,467] [pool-1-thread-2] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2025-01-09 01:15:50,860] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2025-01-09 01:15:51,382] [pool-1-thread-5] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2025-01-09 01:15:51,636] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2025-01-09 01:15:51,820] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] [2025-01-09 01:15:51,984] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2025-01-09 01:15:52,205] [pool-1-thread-4] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2025-01-09 01:15:54,547] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [2025-01-09 01:15:54,711] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] [2025-01-09 01:15:54,984] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2025-01-09 01:15:55,617] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] [2025-01-09 01:15:57,312] [pool-1-thread-2] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] [2025-01-09 01:15:57,468] [pool-1-thread-7] Initializing /data/jay/graphitedm3.dm3: [testng] [2025-01-09 01:15:57,884] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2025-01-09 01:15:59,130] [pool-1-thread-5] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2025-01-09 01:16:00,035] [pool-1-thread-11] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2025-01-09 01:16:00,873] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2025-01-09 01:16:02,235] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2025-01-09 01:16:03,374] [pool-1-thread-2] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2025-01-09 01:16:04,712] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [2025-01-09 01:16:05,029] [pool-1-thread-12] Initializing /data/jay/recAmaghi.dm3: [testng] [2025-01-09 01:16:05,225] [pool-1-thread-7] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2025-01-09 01:16:06,932] [pool-1-thread-5] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] [2025-01-09 01:16:07,505] [pool-1-thread-4] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2025-01-09 01:16:08,640] [pool-1-thread-8] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2025-01-09 01:16:08,808] [pool-1-thread-1] Initializing /data/qa-7642/8.dm4: [testng] [2025-01-09 01:16:09,528] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2025-01-09 01:16:09,930] [pool-1-thread-5] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2025-01-09 01:16:11,040] [pool-1-thread-6] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2025-01-09 01:16:12,260] [pool-1-thread-12] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2025-01-09 01:16:13,310] [pool-1-thread-2] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2025-01-09 01:16:13,504] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2025-01-09 01:16:13,709] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2025-01-09 01:16:14,997] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2025-01-09 01:16:15,177] [pool-1-thread-3] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2025-01-09 01:16:16,547] [pool-1-thread-11] Initializing /data/melissa/annotation-test.dm3: [testng] [2025-01-09 01:16:18,191] [pool-1-thread-10] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] [2025-01-09 01:16:19,720] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2025-01-09 01:16:20,187] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2025-01-09 01:16:20,372] [pool-1-thread-2] Initializing /data/jay/DMtest.dm3: [testng] [2025-01-09 01:16:20,638] [pool-1-thread-4] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2025-01-09 01:16:22,579] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2025-01-09 01:16:23,270] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] [2025-01-09 01:16:24,367] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2025-01-09 01:16:24,781] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2025-01-09 01:16:25,228] [pool-1-thread-9] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2025-01-09 01:16:26,731] [pool-1-thread-11] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2025-01-09 01:16:27,937] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2025-01-09 01:16:28,544] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2025-01-09 01:16:30,632] [pool-1-thread-6] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2025-01-09 01:16:30,987] [pool-1-thread-5] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2025-01-09 01:16:31,156] [pool-1-thread-10] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] [2025-01-09 01:16:31,968] [pool-1-thread-8] Initializing /data/jay/ViewDMtest.dm3: [testng] [2025-01-09 01:16:32,209] [pool-1-thread-12] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2025-01-09 01:16:33,869] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2025-01-09 01:16:34,031] [pool-1-thread-6] Initializing /data/jay/dnasample1.dm3: [testng] [2025-01-09 01:16:34,209] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2025-01-09 01:16:34,419] [pool-1-thread-3] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] [2025-01-09 01:16:37,095] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2025-01-09 01:16:37,243] [pool-1-thread-4] Initializing /data/qa-21761/example.dm4: [testng] [2025-01-09 01:16:38,275] [pool-1-thread-12] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] [2025-01-09 01:16:38,436] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2025-01-09 01:16:38,660] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2025-01-09 01:16:38,821] [pool-1-thread-11] Initializing /data/jay/Carbon.34.dm3: [testng] [2025-01-09 01:16:38,962] [pool-1-thread-8] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2025-01-09 01:16:39,592] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2025-01-09 01:16:40,030] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2025-01-09 01:16:40,248] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2025-01-09 01:16:41,063] [pool-1-thread-1] Initializing /data/samples/test-tiles.dm3: [testng] [2025-01-09 01:16:41,329] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] [2025-01-09 01:16:41,540] [pool-1-thread-7] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2025-01-09 01:16:42,369] [pool-1-thread-8] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2025-01-09 01:16:42,867] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2025-01-09 01:16:43,523] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2025-01-09 01:16:43,707] [pool-1-thread-12] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2025-01-09 01:16:44,755] [pool-1-thread-1] Initializing /data/jay/camtest1.dm3: [testng] [2025-01-09 01:16:44,938] [pool-1-thread-2] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2025-01-09 01:16:45,932] [pool-1-thread-6] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2025-01-09 01:16:46,917] [pool-1-thread-4] Initializing /data/melissa/annotation-test.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 40 seconds Finished: SUCCESS