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Started by upstream project "BIOFORMATS-test-repo" build number 4 originally caused by: Started by upstream project "Trigger" build number 5 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins3146449441863443130.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_504_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 00:32:16,622 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:32:16,623 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service. [testng] 00:32:16,623 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:32:16,625 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:32:16,625 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:32:16,626 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:32:16,626 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:32:16,626 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:32:16,627 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:32:16,628 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:32:16,628 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:32:16,629 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:32:16,843 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:32:16,843 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:32:16,869 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:32:16,869 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:32:16,877 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:32:16,878 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:32:16,878 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:32:16,879 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:32:16,879 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration. [testng] 00:32:16,880 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point [testng] 00:32:16,880 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 253 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-03-17 00:32:16,890] [main] java.version = 17.0.2 [testng] 00:32:16,894 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:32:16,894 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:32:16,939 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-03-17_00-32-16.log] [testng] 00:32:16,941 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration. [testng] [2024-03-17 00:32:16,943] [main] testng.directory = /data [testng] [2024-03-17 00:32:16,943] [main] testng.configDirectory = /config [testng] [2024-03-17 00:32:16,953] [main] testng.multiplier = 1.0 [testng] [2024-03-17 00:32:16,954] [main] testng.in-memory = false [testng] [2024-03-17 00:32:16,955] [main] testng.allow-missing = false [testng] [2024-03-17 00:32:16,955] [main] user.language = en [testng] [2024-03-17 00:32:16,955] [main] user.country = ${user.country} [testng] [2024-03-17 00:32:16,955] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-03-17 00:32:21,228] [main] ---------------------------------------- [testng] [2024-03-17 00:32:21,228] [main] Total files: 259 [testng] [2024-03-17 00:32:21,228] [main] Scan time: 4.273 s (16 ms/file) [testng] [2024-03-17 00:32:21,228] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-03-17 00:38:51,356] [pool-1-thread-1] Initializing /data/brian/Caged Glu-3 point.oib: [testng] 00:38:51,356 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:38:51,356 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:38:51,358 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-03-17_00-38-51.log] [testng] 00:38:51,358 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ff31c44 - End of configuration. [testng] [2024-03-17 00:38:51,642] [pool-1-thread-12] Initializing /data/barbara/Image_with_working_import.oib: [testng] 00:38:51,642 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:38:51,642 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:38:51,644 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-03-17_00-38-51.log] [testng] 00:38:51,644 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51efdebe - End of configuration. [testng] [2024-03-17 00:38:51,850] [pool-1-thread-11] Initializing /data/tom/RGB-1.avi: [testng] 00:38:51,850 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:38:51,850 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:38:51,852 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-03-17_00-38-51.log] [testng] 00:38:51,852 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4b2c2862 - End of configuration. [testng] [2024-03-17 00:38:51,879] [pool-1-thread-10] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] 00:38:51,880 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:38:51,880 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:38:51,881 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-03-17_00-38-51.log] [testng] 00:38:51,881 |-INFO in ch.qos.logback.core.sift.SiftProcessor@139e39f9 - End of configuration. [testng] [2024-03-17 00:38:52,012] [pool-1-thread-9] Initializing /data/stefan/cytosol_03e.oib: [testng] 00:38:52,012 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:38:52,013 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:38:52,013 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-03-17_00-38-52.log] [testng] 00:38:52,014 |-INFO in ch.qos.logback.core.sift.SiftProcessor@377b66b4 - End of configuration. [testng] [2024-03-17 00:38:52,664] [pool-1-thread-8] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] 00:38:52,664 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:38:52,664 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:38:52,665 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-03-17_00-38-52.log] [testng] 00:38:52,665 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49b5e6bb - End of configuration. [testng] [2024-03-17 00:38:53,350] [pool-1-thread-7] Initializing /data/francesco/fGfp.c15.oib: [testng] 00:38:53,350 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:38:53,350 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:38:53,351 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-03-17_00-38-53.log] [testng] 00:38:53,352 |-INFO in ch.qos.logback.core.sift.SiftProcessor@481ffd45 - End of configuration. [testng] [2024-03-17 00:38:53,456] [pool-1-thread-6] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] 00:38:53,456 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:38:53,457 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:38:53,457 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-03-17_00-38-53.log] [testng] 00:38:53,458 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5ac9189b - End of configuration. [testng] [2024-03-17 00:38:53,609] [pool-1-thread-5] Initializing /data/brian/Lambda10nm.oib: [testng] 00:38:53,610 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:38:53,610 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:38:53,610 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-03-17_00-38-53.log] [testng] 00:38:53,611 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d9530e7 - End of configuration. [testng] [2024-03-17 00:38:53,703] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] 00:38:53,703 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:38:53,704 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:38:53,704 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-03-17_00-38-53.log] [testng] 00:38:53,705 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f976c3a - End of configuration. [testng] [2024-03-17 00:38:54,325] [pool-1-thread-3] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] 00:38:54,325 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:38:54,325 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:38:54,326 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-03-17_00-38-54.log] [testng] 00:38:54,327 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4644f4c5 - End of configuration. [testng] [2024-03-17 00:38:54,436] [pool-1-thread-2] Initializing /data/glen/singleseqframe.oif: [testng] 00:38:54,436 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:38:54,436 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:38:54,437 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-03-17_00-38-54.log] [testng] 00:38:54,437 |-INFO in ch.qos.logback.core.sift.SiftProcessor@487e20d9 - End of configuration. [testng] [2024-03-17 00:38:56,883] [pool-1-thread-11] Initializing /data/chris/missegragation-15.oib: [testng] [2024-03-17 00:38:57,184] [pool-1-thread-12] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2024-03-17 00:38:57,334] [pool-1-thread-5] Initializing /data/aryeh/030408 2 1.oib: [testng] [2024-03-17 00:38:57,859] [pool-1-thread-7] Initializing /data/molly/11OCT9.OIF: [testng] [2024-03-17 00:39:00,478] [pool-1-thread-1] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2024-03-17 00:39:03,608] [pool-1-thread-3] Initializing /data/brian/Kaede15.oib: [testng] [2024-03-17 00:39:04,780] [pool-1-thread-10] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2024-03-17 00:39:04,944] [pool-1-thread-4] Initializing /data/molly/11OCT4.OIF: [testng] [2024-03-17 00:39:06,215] [pool-1-thread-8] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] [2024-03-17 00:39:06,869] [pool-1-thread-9] Initializing /data/glen/notsaturated.oib: [testng] [2024-03-17 00:39:07,160] [pool-1-thread-2] Initializing /data/molly/11OCT8.OIF: [testng] [2024-03-17 00:39:08,547] [pool-1-thread-11] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-03-17 00:39:09,257] [pool-1-thread-5] Initializing /data/glen/simulstack.oib: [testng] [2024-03-17 00:39:09,654] [pool-1-thread-10] Initializing /data/johannes/step5b.bmp: [testng] [2024-03-17 00:39:09,955] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2024-03-17 00:39:11,119] [pool-1-thread-3] Initializing /data/glen/Null file/test change.oif: [testng] [2024-03-17 00:39:11,512] [pool-1-thread-10] Initializing /data/allan/62909#1.oib: [testng] [2024-03-17 00:39:11,685] [pool-1-thread-9] Initializing /data/aryeh/control_test.oib: [testng] [2024-03-17 00:39:17,120] [pool-1-thread-5] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2024-03-17 00:39:17,796] [pool-1-thread-10] Initializing /data/jae/Image0001.oib: [testng] [2024-03-17 00:39:18,596] [pool-1-thread-11] Initializing /data/stefan/cytosol_01a.oif: [testng] [2024-03-17 00:39:33,244] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-03-17 00:39:34,825] [pool-1-thread-12] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2024-03-17 00:39:35,228] [pool-1-thread-10] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-03-17 00:39:36,800] [pool-1-thread-12] Initializing /data/yoshihito/XY.oib: [testng] [2024-03-17 00:39:37,437] [pool-1-thread-3] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2024-03-17 00:39:37,990] [pool-1-thread-12] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2024-03-17 00:39:38,967] [pool-1-thread-3] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-03-17 00:39:45,405] [pool-1-thread-12] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2024-03-17 00:39:47,174] [pool-1-thread-12] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2024-03-17 00:39:48,244] [pool-1-thread-9] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] [2024-03-17 00:39:50,366] [pool-1-thread-12] Initializing /data/monica/Image0056.oif: [testng] [2024-03-17 00:39:52,290] [pool-1-thread-3] Initializing /data/christian/20min.oif: [testng] [2024-03-17 00:39:57,251] [pool-1-thread-3] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-03-17 00:39:58,854] [pool-1-thread-9] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2024-03-17 00:39:59,243] [pool-1-thread-9] Initializing /data/qa-17748/Image0079.oib: [testng] [2024-03-17 00:40:00,641] [pool-1-thread-9] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] [2024-03-17 00:40:01,281] [pool-1-thread-12] Initializing /data/yasunori/series_1.oib: [testng] [2024-03-17 00:40:02,359] [pool-1-thread-9] Initializing /data/glen/Null file/test no change.oif: [testng] [2024-03-17 00:40:03,424] [pool-1-thread-12] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2024-03-17 00:40:03,824] [pool-1-thread-12] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] [2024-03-17 00:40:04,440] [pool-1-thread-5] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2024-03-17 00:40:06,448] [pool-1-thread-5] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-03-17 00:40:08,718] [pool-1-thread-5] Initializing /data/johannes/step3.bmp: [testng] [2024-03-17 00:40:09,896] [pool-1-thread-5] Initializing /data/glen/singleseqline.oib: [testng] [2024-03-17 00:40:10,816] [pool-1-thread-9] Initializing /data/sten/01.oib: [testng] [2024-03-17 00:40:11,287] [pool-1-thread-5] Initializing /data/stefan/cytosol_08b.oif: [testng] [2024-03-17 00:40:12,590] [pool-1-thread-12] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] [2024-03-17 00:40:14,189] [pool-1-thread-9] Initializing /data/glen/singleseqline.oif: [testng] [2024-03-17 00:40:17,274] [pool-1-thread-6] Initializing /data/molly/11OCT11.OIF: [testng] [2024-03-17 00:40:25,788] [pool-1-thread-9] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2024-03-17 00:40:27,274] [pool-1-thread-9] Initializing /data/michael/CELL3.oib: [testng] [2024-03-17 00:40:28,478] [pool-1-thread-9] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2024-03-17 00:40:37,963] [pool-1-thread-3] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] [2024-03-17 00:40:40,194] [pool-1-thread-3] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-03-17 00:40:42,888] [pool-1-thread-3] Initializing /data/glen/notsaturated.oif: [testng] [2024-03-17 00:41:00,700] [pool-1-thread-9] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-03-17 00:41:03,051] [pool-1-thread-9] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-03-17 00:41:05,402] [pool-1-thread-9] Initializing /data/johannes/step4.bmp: [testng] [2024-03-17 00:41:06,673] [pool-1-thread-9] Initializing /data/johannes/step1.bmp: [testng] [2024-03-17 00:41:07,827] [pool-1-thread-9] Initializing /data/tom/zseries-test.oib: [testng] [2024-03-17 00:41:12,468] [pool-1-thread-9] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2024-03-17 00:41:22,690] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] [2024-03-17 00:41:26,121] [pool-1-thread-9] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-03-17 00:41:29,972] [pool-1-thread-9] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-03-17 00:41:31,786] [pool-1-thread-9] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2024-03-17 00:41:34,498] [pool-1-thread-9] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-03-17 00:42:21,088] [pool-1-thread-12] Initializing /data/glen/Image0002.oif: [testng] [2024-03-17 00:42:31,354] [pool-1-thread-3] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2024-03-17 00:42:48,680] [pool-1-thread-10] Initializing /data/molly/11OCT3.OIF: [testng] [2024-03-17 00:43:08,709] [pool-1-thread-4] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2024-03-17 00:43:10,554] [pool-1-thread-4] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-03-17 00:43:15,017] [pool-1-thread-4] Initializing /data/johannes/step4b.bmp: [testng] [2024-03-17 00:43:16,230] [pool-1-thread-4] Initializing /data/aryeh/1h.oib: [testng] [2024-03-17 00:43:21,906] [pool-1-thread-4] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-03-17 00:43:23,348] [pool-1-thread-3] Initializing /data/glen/singlesimul.oib: [testng] [2024-03-17 00:43:24,751] [pool-1-thread-3] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2024-03-17 00:43:25,147] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2024-03-17 00:43:27,602] [pool-1-thread-2] Initializing /data/brian/CFP-GFP2.oib: [testng] [2024-03-17 00:43:28,631] [pool-1-thread-3] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2024-03-17 00:43:31,252] [pool-1-thread-4] Initializing /data/glen/singleseqframe.oib: [testng] [2024-03-17 00:43:32,204] [pool-1-thread-2] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2024-03-17 00:43:32,958] [pool-1-thread-4] Initializing /data/simon/used_to_work.oib: [testng] [2024-03-17 00:43:34,618] [pool-1-thread-2] Initializing /data/glen/singlesimul.oif: [testng] [2024-03-17 00:43:36,164] [pool-1-thread-4] Initializing /data/stefan/yc2_live-03.oib: [testng] [2024-03-17 00:43:41,430] [pool-1-thread-4] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-03-17 00:43:43,329] [pool-1-thread-4] Initializing /data/karl/Image0009.oib: [testng] [2024-03-17 00:43:44,579] [pool-1-thread-4] Initializing /data/glen/seqlinestack.oib: [testng] [2024-03-17 00:43:47,153] [pool-1-thread-2] Initializing /data/kay/IM2pg.oib: [testng] [2024-03-17 00:43:48,000] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-03-17 00:43:50,560] [pool-1-thread-2] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2024-03-17 00:43:51,703] [pool-1-thread-4] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] [2024-03-17 00:43:53,882] [pool-1-thread-2] Initializing /data/glen/4205basal106072.oif: [testng] [2024-03-17 00:44:00,844] [pool-1-thread-4] Initializing /data/molly/11OCT7.OIF: [testng] [2024-03-17 00:44:06,281] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-03-17 00:44:10,871] [pool-1-thread-9] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] [2024-03-17 00:44:15,671] [pool-1-thread-9] Initializing /data/brian/lambda02nm.oib: [testng] [2024-03-17 00:44:20,026] [pool-1-thread-9] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-03-17 00:44:23,694] [pool-1-thread-9] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2024-03-17 00:44:28,142] [pool-1-thread-9] Initializing /data/qa-17748/Image0098.oib: [testng] [2024-03-17 00:44:31,287] [pool-1-thread-9] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2024-03-17 00:46:07,704] [pool-1-thread-9] Initializing /data/johannes/step2.bmp: [testng] [2024-03-17 00:46:09,365] [pool-1-thread-9] Initializing /data/molly/11OCT6.OIF: [testng] [2024-03-17 00:46:32,081] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-03-17 00:46:36,371] [pool-1-thread-8] Initializing /data/simon/never_worked.oib: [testng] [2024-03-17 00:46:39,288] [pool-1-thread-8] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-03-17 00:46:43,161] [pool-1-thread-8] Initializing /data/glen/seqlinestack.oif: [testng] [2024-03-17 00:47:04,031] [pool-1-thread-5] Initializing /data/molly/11OCT10.OIF: [testng] [2024-03-17 00:47:23,435] [pool-1-thread-6] Initializing /data/glen/simulstack.oif: [testng] [2024-03-17 00:48:19,985] [pool-1-thread-12] Initializing /data/david/Image0016.oif: [testng] [2024-03-17 00:48:49,271] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2024-03-17 00:48:54,585] [pool-1-thread-12] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2024-03-17 00:48:57,667] [pool-1-thread-12] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-03-17 00:49:00,355] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-03-17 00:49:04,501] [pool-1-thread-12] Initializing /data/molly/11OCT2.OIF: [testng] [2024-03-17 00:49:27,441] [pool-1-thread-3] Initializing /data/pedro/plv-test.oib: [testng] [2024-03-17 00:49:29,870] [pool-1-thread-3] Initializing /data/brian/PA-GFP-3.oib: [testng] [2024-03-17 00:49:34,577] [pool-1-thread-3] Initializing /data/marc/V0606L.oib: [testng] [2024-03-17 00:49:39,385] [pool-1-thread-7] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2024-03-17 00:50:01,444] [pool-1-thread-3] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-03-17 00:50:08,510] [pool-1-thread-3] Initializing /data/david/Image0016.oib: [testng] [2024-03-17 00:50:09,531] [pool-1-thread-7] Initializing /data/yoshihito/XY.oif: [testng] [2024-03-17 00:50:10,998] [pool-1-thread-3] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2024-03-17 00:50:14,405] [pool-1-thread-3] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2024-03-17 00:50:22,352] [pool-1-thread-7] Initializing /data/molly/11OCT5.OIF: [testng] [2024-03-17 00:51:14,857] [pool-1-thread-4] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-03-17 00:51:17,535] [pool-1-thread-4] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-03-17 00:51:19,201] [pool-1-thread-4] Initializing /data/brian/FLIP.oib: [testng] [2024-03-17 00:51:24,690] [pool-1-thread-4] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-03-17 00:51:34,217] [pool-1-thread-4] Initializing /data/glen/111407.oif: [testng] [2024-03-17 00:51:52,069] [pool-1-thread-6] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2024-03-17 00:51:56,548] [pool-1-thread-6] Initializing /data/marc/V0606J.oib: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 27 minutes 43 seconds Finished: SUCCESS