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Started by upstream project "BIOFORMATS-test-repo" build number 38 originally caused by: Started by upstream project "Trigger" build number 44 originally caused by: Started by user devspace Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4 [BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins11050447715246534800.sh + '[' hitachi = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_5236_merge_ci -v /uod/idr/repos/curated/hitachi:/data -v /uod/idr-scratch/merge-ci/curated/hitachi:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 09:06:17,834 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 09:06:17,889 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 09:06:17,951 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 09:06:17,951 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 09:06:17,969 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 09:06:17,969 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 09:06:17,970 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 09:06:17,971 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 09:06:17,971 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration. [testng] 09:06:17,973 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point [testng] 09:06:17,973 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 443 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-04-19 09:06:17,993] [main] java.version = 1.8.0_342 [testng] 09:06:17,999 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 09:06:17,999 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:06:18,083 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-19_09-06-18.log] [testng] 09:06:18,087 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-04-19 09:06:18,091] [main] testng.directory = /data [testng] [2024-04-19 09:06:18,091] [main] testng.configDirectory = /config [testng] [2024-04-19 09:06:18,115] [main] testng.multiplier = 1.0 [testng] [2024-04-19 09:06:18,116] [main] testng.in-memory = false [testng] [2024-04-19 09:06:18,116] [main] testng.allow-missing = false [testng] [2024-04-19 09:06:18,116] [main] user.language = en [testng] [2024-04-19 09:06:18,116] [main] user.country = ${user.country} [testng] [2024-04-19 09:06:18,116] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-04-19 09:06:19,326] [main] ---------------------------------------- [testng] [2024-04-19 09:06:19,326] [main] Total files: 21 [testng] [2024-04-19 09:06:19,326] [main] Scan time: 1.21 s (57 ms/file) [testng] [2024-04-19 09:06:19,326] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 18 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-04-19 09:06:21,531] [pool-1-thread-1] Initializing /data/stefan/001_q15.txt: [testng] 09:06:21,531 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 09:06:21,531 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:06:21,532 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-19_09-06-21.log] [testng] 09:06:21,533 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35ffafc8 - End of configuration. [testng] [2024-04-19 09:06:21,605] [pool-1-thread-12] Initializing /data/stefan/001_q09.txt: [testng] 09:06:21,605 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 09:06:21,605 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:06:21,609 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-19_09-06-21.log] [testng] 09:06:21,610 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4ec76e36 - End of configuration. [testng] [2024-04-19 09:06:21,695] [pool-1-thread-11] Initializing /data/stefan/001_q10.txt: [testng] 09:06:21,696 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 09:06:21,696 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:06:21,697 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-19_09-06-21.log] [testng] 09:06:21,697 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a71253b - End of configuration. [testng] [2024-04-19 09:06:21,769] [pool-1-thread-10] Initializing /data/stefan/001_q14.txt: [testng] 09:06:21,770 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 09:06:21,770 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:06:21,770 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-19_09-06-21.log] [testng] 09:06:21,771 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72680dd3 - End of configuration. [testng] [2024-04-19 09:06:21,807] [pool-1-thread-9] Initializing /data/stefan/001_q11.txt: [testng] 09:06:21,807 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 09:06:21,807 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:06:21,808 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-19_09-06-21.log] [testng] 09:06:21,808 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58f54975 - End of configuration. [testng] [2024-04-19 09:06:21,878] [pool-1-thread-8] Initializing /data/stefan/001_q01.txt: [testng] 09:06:21,878 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 09:06:21,878 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:06:21,879 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-19_09-06-21.log] [testng] 09:06:21,879 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4889f6ff - End of configuration. [testng] [2024-04-19 09:06:21,907] [pool-1-thread-7] Initializing /data/stefan/001_q03.txt: [testng] 09:06:21,908 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 09:06:21,908 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:06:21,908 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-19_09-06-21.log] [testng] 09:06:21,909 |-INFO in ch.qos.logback.core.sift.SiftProcessor@269bbeed - End of configuration. [testng] [2024-04-19 09:06:21,931] [pool-1-thread-6] Initializing /data/stefan/001_q08.txt: [testng] 09:06:21,932 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 09:06:21,932 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:06:21,932 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-19_09-06-21.log] [testng] 09:06:21,933 |-INFO in ch.qos.logback.core.sift.SiftProcessor@46edac48 - End of configuration. [testng] [2024-04-19 09:06:21,987] [pool-1-thread-5] Initializing /data/stefan/001_q04.txt: [testng] 09:06:21,988 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 09:06:21,988 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:06:21,988 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-19_09-06-21.log] [testng] 09:06:21,989 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ffbf783 - End of configuration. [testng] [2024-04-19 09:06:22,011] [pool-1-thread-4] Initializing /data/stefan/001_q13.txt: [testng] 09:06:22,011 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 09:06:22,011 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:06:22,012 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-19_09-06-22.log] [testng] 09:06:22,012 |-INFO in ch.qos.logback.core.sift.SiftProcessor@59725012 - End of configuration. [testng] [2024-04-19 09:06:22,063] [pool-1-thread-3] Initializing /data/stefan/001_q06.txt: [testng] 09:06:22,063 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 09:06:22,063 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:06:22,063 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-19_09-06-22.log] [testng] 09:06:22,064 |-INFO in ch.qos.logback.core.sift.SiftProcessor@312567b8 - End of configuration. [testng] [2024-04-19 09:06:22,090] [pool-1-thread-2] Initializing /data/stefan/001_q02.txt: [testng] 09:06:22,090 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 09:06:22,091 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:06:22,091 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-19_09-06-22.log] [testng] 09:06:22,092 |-INFO in ch.qos.logback.core.sift.SiftProcessor@381c645 - End of configuration. [testng] [2024-04-19 09:06:24,626] [pool-1-thread-2] Initializing /data/stefan/001_q16.txt: [testng] [2024-04-19 09:06:24,672] [pool-1-thread-1] Initializing /data/stefan/001_q17.txt: [testng] [2024-04-19 09:06:24,749] [pool-1-thread-10] Initializing /data/stefan/001_q12.txt: [testng] [2024-04-19 09:06:24,838] [pool-1-thread-11] Initializing /data/stefan/001_q07.txt: [testng] [2024-04-19 09:06:24,918] [pool-1-thread-6] Initializing /data/stefan/001_q05.txt: [testng] [2024-04-19 09:06:24,947] [pool-1-thread-12] Initializing /data/stefan/001_q18.txt: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 954, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 13 seconds Finished: SUCCESS