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Started by upstream project "BIOFORMATS-test-repo" build number 40 originally caused by: Started by upstream project "Trigger" build number 46 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3 [BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins2637379272608042048.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_5551_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:20:35,053 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:20:35,054 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service. [testng] 01:20:35,054 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:20:35,055 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:20:35,055 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:20:35,056 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:20:35,056 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:20:35,056 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:20:35,057 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:20:35,057 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:20:35,058 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:20:35,058 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:20:35,246 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:20:35,246 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:20:35,268 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:20:35,268 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:20:35,274 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:20:35,274 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:20:35,275 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:20:35,275 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:20:35,275 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration. [testng] 01:20:35,277 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point [testng] 01:20:35,277 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 220 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-04-21 01:20:35,287] [main] java.version = 17.0.2 [testng] 01:20:35,290 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:20:35,290 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:35,331 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-21_01-20-35.log] [testng] 01:20:35,333 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration. [testng] [2024-04-21 01:20:35,335] [main] testng.directory = /data [testng] [2024-04-21 01:20:35,335] [main] testng.configDirectory = /config [testng] [2024-04-21 01:20:35,343] [main] testng.multiplier = 1.0 [testng] [2024-04-21 01:20:35,344] [main] testng.in-memory = false [testng] [2024-04-21 01:20:35,344] [main] testng.allow-missing = false [testng] [2024-04-21 01:20:35,344] [main] user.language = en [testng] [2024-04-21 01:20:35,344] [main] user.country = ${user.country} [testng] [2024-04-21 01:20:35,344] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-04-21 01:20:36,238] [main] ---------------------------------------- [testng] [2024-04-21 01:20:36,238] [main] Total files: 103 [testng] [2024-04-21 01:20:36,238] [main] Scan time: 0.894 s (8 ms/file) [testng] [2024-04-21 01:20:36,238] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-04-21 01:20:43,240] [pool-1-thread-1] Initializing /data/chip/Nanogold-1.dm3: [testng] 01:20:43,240 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:20:43,240 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:43,241 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-21_01-20-43.log] [testng] 01:20:43,242 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21588c7a - End of configuration. [testng] [2024-04-21 01:20:43,280] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] 01:20:43,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:20:43,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:43,282 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-21_01-20-43.log] [testng] 01:20:43,282 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3db92c7a - End of configuration. [testng] [2024-04-21 01:20:43,304] [pool-1-thread-11] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] 01:20:43,304 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:20:43,304 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:43,305 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-21_01-20-43.log] [testng] 01:20:43,306 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47bf4cbc - End of configuration. [testng] [2024-04-21 01:20:43,345] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] 01:20:43,345 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:20:43,345 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:43,346 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-21_01-20-43.log] [testng] 01:20:43,346 |-INFO in ch.qos.logback.core.sift.SiftProcessor@ece375c - End of configuration. [testng] [2024-04-21 01:20:43,368] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] 01:20:43,368 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:20:43,368 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:43,369 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-21_01-20-43.log] [testng] 01:20:43,370 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c0f3ee3 - End of configuration. [testng] [2024-04-21 01:20:43,388] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] 01:20:43,388 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:20:43,389 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:43,389 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-21_01-20-43.log] [testng] 01:20:43,390 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18a4f4bd - End of configuration. [testng] [2024-04-21 01:20:43,409] [pool-1-thread-7] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] 01:20:43,409 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:20:43,409 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:43,410 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-21_01-20-43.log] [testng] 01:20:43,410 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1fc30979 - End of configuration. [testng] [2024-04-21 01:20:43,426] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] 01:20:43,426 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:20:43,427 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:43,428 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-21_01-20-43.log] [testng] 01:20:43,428 |-INFO in ch.qos.logback.core.sift.SiftProcessor@fe1a735 - End of configuration. [testng] [2024-04-21 01:20:43,555] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] 01:20:43,555 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:20:43,555 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:43,556 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-21_01-20-43.log] [testng] 01:20:43,556 |-INFO in ch.qos.logback.core.sift.SiftProcessor@24a50520 - End of configuration. [testng] [2024-04-21 01:20:43,865] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] 01:20:43,865 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:20:43,865 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:43,866 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-21_01-20-43.log] [testng] 01:20:43,867 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1c4eb71a - End of configuration. [testng] [2024-04-21 01:20:43,936] [pool-1-thread-3] Initializing /data/jay/samples/APC2a-e4.tif: [testng] 01:20:43,936 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:20:43,936 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:43,937 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-21_01-20-43.log] [testng] 01:20:43,937 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7edc3fb3 - End of configuration. [testng] [2024-04-21 01:20:44,027] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] 01:20:44,027 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:20:44,027 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:44,028 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-21_01-20-44.log] [testng] 01:20:44,029 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2a628378 - End of configuration. [testng] [2024-04-21 01:20:45,644] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2024-04-21 01:20:45,661] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-04-21 01:20:45,750] [pool-1-thread-12] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2024-04-21 01:20:45,770] [pool-1-thread-4] Initializing /data/jay/camtest1.dm3: [testng] [2024-04-21 01:20:46,154] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2024-04-21 01:20:46,451] [pool-1-thread-11] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2024-04-21 01:20:46,674] [pool-1-thread-9] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2024-04-21 01:20:46,922] [pool-1-thread-8] Initializing /data/melissa/annotation-test.dm3: [testng] [2024-04-21 01:20:47,140] [pool-1-thread-8] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-04-21 01:20:47,200] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [2024-04-21 01:20:47,559] [pool-1-thread-8] Initializing /data/jay/smallerfile.dm3: [testng] [2024-04-21 01:20:47,605] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2024-04-21 01:20:47,867] [pool-1-thread-9] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2024-04-21 01:20:48,349] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-04-21 01:20:48,413] [pool-1-thread-9] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] [2024-04-21 01:20:48,838] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2024-04-21 01:20:49,360] [pool-1-thread-5] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2024-04-21 01:20:49,373] [pool-1-thread-2] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-04-21 01:20:49,386] [pool-1-thread-7] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-04-21 01:20:49,840] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] [2024-04-21 01:20:50,104] [pool-1-thread-2] Initializing /data/jay/dnasample.tif: [testng] [2024-04-21 01:20:50,644] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [2024-04-21 01:20:51,374] [pool-1-thread-4] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2024-04-21 01:20:51,994] [pool-1-thread-1] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2024-04-21 01:20:52,228] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-04-21 01:20:53,248] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-04-21 01:20:53,724] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-04-21 01:20:54,915] [pool-1-thread-9] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-04-21 01:20:55,821] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-04-21 01:20:56,115] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-04-21 01:20:56,278] [pool-1-thread-7] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-04-21 01:20:56,440] [pool-1-thread-5] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] [2024-04-21 01:20:56,705] [pool-1-thread-5] Initializing /data/jay/ViewDMtest.dm3: [testng] [2024-04-21 01:20:56,800] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2024-04-21 01:20:57,716] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2024-04-21 01:20:57,725] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2024-04-21 01:20:57,738] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2024-04-21 01:20:59,702] [pool-1-thread-2] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-04-21 01:21:00,070] [pool-1-thread-4] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-04-21 01:21:00,857] [pool-1-thread-9] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2024-04-21 01:21:01,114] [pool-1-thread-9] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2024-04-21 01:21:02,230] [pool-1-thread-5] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-04-21 01:21:03,124] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-04-21 01:21:04,206] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [2024-04-21 01:21:05,011] [pool-1-thread-7] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-04-21 01:21:05,293] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2024-04-21 01:21:05,723] [pool-1-thread-4] Initializing /data/jay/recAmaghi.dm3: [testng] [2024-04-21 01:21:06,375] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-04-21 01:21:06,444] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2024-04-21 01:21:07,618] [pool-1-thread-9] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2024-04-21 01:21:09,342] [pool-1-thread-2] Initializing /data/qa-7642/8.dm4: [testng] [2024-04-21 01:21:09,894] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2024-04-21 01:21:11,295] [pool-1-thread-8] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-04-21 01:21:11,486] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-04-21 01:21:11,510] [pool-1-thread-2] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2024-04-21 01:21:12,858] [pool-1-thread-3] Initializing /data/samples/test-tiles.dm3: [testng] [2024-04-21 01:21:13,032] [pool-1-thread-7] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2024-04-21 01:21:13,394] [pool-1-thread-3] Initializing /data/qa-21761/example.dm4: [testng] [2024-04-21 01:21:14,120] [pool-1-thread-9] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] [2024-04-21 01:21:14,158] [pool-1-thread-7] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-04-21 01:21:14,373] [pool-1-thread-11] Initializing /data/jay/DMtest2.dm3: [testng] [2024-04-21 01:21:14,466] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2024-04-21 01:21:14,568] [pool-1-thread-3] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2024-04-21 01:21:14,775] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2024-04-21 01:21:15,224] [pool-1-thread-10] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-04-21 01:21:15,774] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-04-21 01:21:16,538] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] [2024-04-21 01:21:16,912] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2024-04-21 01:21:17,085] [pool-1-thread-2] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2024-04-21 01:21:17,906] [pool-1-thread-12] Initializing /data/ofra/lowloss.dm3: [testng] [2024-04-21 01:21:18,075] [pool-1-thread-12] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2024-04-21 01:21:18,126] [pool-1-thread-3] Initializing /data/jay/dnasample1.dm3: [testng] [2024-04-21 01:21:18,593] [pool-1-thread-6] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2024-04-21 01:21:19,229] [pool-1-thread-6] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] [2024-04-21 01:21:19,248] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2024-04-21 01:21:19,452] [pool-1-thread-7] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-04-21 01:21:19,771] [pool-1-thread-6] Initializing /data/jay/DMtest.dm3: [testng] [2024-04-21 01:21:19,784] [pool-1-thread-10] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2024-04-21 01:21:20,471] [pool-1-thread-1] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-04-21 01:21:20,560] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2024-04-21 01:21:20,812] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2024-04-21 01:21:21,187] [pool-1-thread-1] Initializing /data/jay/Carbon.34.dm3: [testng] [2024-04-21 01:21:21,310] [pool-1-thread-11] Initializing /data/melissa/annotation-test.tif: [testng] [2024-04-21 01:21:21,342] [pool-1-thread-5] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-04-21 01:21:21,652] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-04-21 01:21:21,716] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 9 seconds Finished: SUCCESS