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Started by upstream project "BIOFORMATS-test-repo" build number 40
originally caused by:
 Started by upstream project "Trigger" build number 46
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4
[BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins18236653728474949186.sh
+ '[' canon = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_5592_merge_ci -v /uod/idr/repos/curated/canon:/data -v /uod/idr-scratch/merge-ci/curated/canon:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 01:28:13,272 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:28:13,273 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
   [testng] 01:28:13,273 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:28:13,274 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:28:13,274 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:28:13,275 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:28:13,275 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:28:13,275 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:28:13,275 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:28:13,276 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:28:13,276 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:28:13,276 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:28:13,440 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:28:13,440 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:28:13,463 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:28:13,463 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:28:13,470 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:28:13,470 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:28:13,470 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:28:13,471 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:28:13,471 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
   [testng] 01:28:13,472 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
   [testng] 01:28:13,472 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 197 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-04-21 01:28:13,483] [main] java.version = 17.0.2
   [testng] 01:28:13,487 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:28:13,487 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:28:13,529 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-21_01-28-13.log]
   [testng] 01:28:13,530 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
   [testng] [2024-04-21 01:28:13,532] [main] testng.directory = /data
   [testng] [2024-04-21 01:28:13,533] [main] testng.configDirectory = /config
   [testng] [2024-04-21 01:28:13,542] [main] testng.multiplier = 1.0
   [testng] [2024-04-21 01:28:13,543] [main] testng.in-memory = false
   [testng] [2024-04-21 01:28:13,544] [main] testng.allow-missing = false
   [testng] [2024-04-21 01:28:13,544] [main] user.language = en
   [testng] [2024-04-21 01:28:13,544] [main] user.country = ${user.country}
   [testng] [2024-04-21 01:28:13,544] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-04-21 01:28:15,065] [main] ----------------------------------------
   [testng] [2024-04-21 01:28:15,065] [main] Total files: 13
   [testng] [2024-04-21 01:28:15,066] [main] Scan time: 1.521 s (117 ms/file)
   [testng] [2024-04-21 01:28:15,066] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 13 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-04-21 01:28:17,936] [pool-1-thread-1] Initializing /data/cls/_N5Y0001.CR2: 
   [testng] 01:28:17,937 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:28:17,937 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:28:17,938 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-21_01-28-17.log]
   [testng] 01:28:17,939 |-INFO in ch.qos.logback.core.sift.SiftProcessor@b9445d3 - End of configuration.
   [testng] [2024-04-21 01:28:18,047] [pool-1-thread-12] Initializing /data/pete/Learning to Fly.JPG: 
   [testng] 01:28:18,047 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:28:18,047 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:28:18,048 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-21_01-28-18.log]
   [testng] 01:28:18,049 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3baedfca - End of configuration.
   [testng] [2024-04-21 01:28:18,332] [pool-1-thread-11] Initializing /data/pete/Raw-WAV.WAV: 
   [testng] 01:28:18,333 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:28:18,333 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:28:18,334 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-21_01-28-18.log]
   [testng] 01:28:18,334 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5be50093 - End of configuration.
   [testng] [2024-04-21 01:28:18,521] [pool-1-thread-10] Initializing /data/pete/DNG-WAV.WAV: 
   [testng] 01:28:18,521 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:28:18,522 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:28:18,523 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-21_01-28-18.log]
   [testng] 01:28:18,524 |-INFO in ch.qos.logback.core.sift.SiftProcessor@11692afc - End of configuration.
   [testng] [2024-04-21 01:28:18,571] [pool-1-thread-9] Initializing /data/pete/DNG-CR2.CR2: 
   [testng] 01:28:18,571 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:28:18,571 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:28:18,572 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-21_01-28-18.log]
   [testng] 01:28:18,572 |-INFO in ch.qos.logback.core.sift.SiftProcessor@613a2714 - End of configuration.
   [testng] [2024-04-21 01:28:18,625] [pool-1-thread-8] Initializing /data/pete/DNG-JPG.JPG: 
   [testng] 01:28:18,626 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:28:18,626 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:28:18,669 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-21_01-28-18.log]
   [testng] 01:28:18,670 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4955b0b2 - End of configuration.
   [testng] [2024-04-21 01:28:18,745] [pool-1-thread-7] Initializing /data/pete/Raw-JPG.JPG: 
   [testng] 01:28:18,745 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:28:18,745 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:28:18,746 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-21_01-28-18.log]
   [testng] 01:28:18,747 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b11cb31 - End of configuration.
   [testng] [2024-04-21 01:28:19,113] [pool-1-thread-6] Initializing /data/pete/DNG-CRW.CRW: 
   [testng] 01:28:19,113 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:28:19,113 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:28:19,114 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-21_01-28-19.log]
   [testng] 01:28:19,114 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2a22d3d3 - End of configuration.
   [testng] [2024-04-21 01:28:19,199] [pool-1-thread-5] Initializing /data/pete/DNG-THM.THM: 
   [testng] 01:28:19,200 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:28:19,200 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:28:19,201 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-21_01-28-19.log]
   [testng] 01:28:19,202 |-INFO in ch.qos.logback.core.sift.SiftProcessor@212612f0 - End of configuration.
   [testng] [2024-04-21 01:28:19,343] [pool-1-thread-4] Initializing /data/pete/Raw-CRW.CRW: 
   [testng] 01:28:19,343 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:28:19,343 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:28:19,344 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-21_01-28-19.log]
   [testng] 01:28:19,345 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2a070e64 - End of configuration.
   [testng] [2024-04-21 01:28:19,751] [pool-1-thread-3] Initializing /data/kinor/2013_03_08_0808.CR2: 
   [testng] 01:28:19,751 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:28:19,751 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:28:19,752 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-21_01-28-19.log]
   [testng] 01:28:19,752 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3efe2e7b - End of configuration.
   [testng] [2024-04-21 01:28:19,805] [pool-1-thread-2] Initializing /data/pete/Raw-THM.THM: 
   [testng] 01:28:19,805 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:28:19,805 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:28:19,806 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-21_01-28-19.log]
   [testng] 01:28:19,807 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47c18baf - End of configuration.
   [testng] [2024-04-21 01:28:25,920] [pool-1-thread-1] Initializing /data/pete/Raw-CR2.CR2: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 689, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 26 seconds
Finished: SUCCESS