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Started by upstream project "BIOFORMATS-test-repo" build number 356 originally caused by: Started by upstream project "Trigger" build number 382 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins2711868215268946190.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_56645_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 00:22:05,853 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 00:22:05,854 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - No custom configurators were discovered as a service. [testng] 00:22:05,854 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:22:05,855 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:22:05,855 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:22:05,856 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:22:05,856 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:22:05,856 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:22:05,856 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:22:05,857 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:22:05,857 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:22:05,857 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:22:06,090 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:22:06,090 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:22:06,118 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:22:06,119 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:22:06,127 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:22:06,127 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:22:06,127 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:22:06,128 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:22:06,128 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@63355449 - End of configuration. [testng] 00:22:06,129 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48ae9b55 - Registering current configuration as safe fallback point [testng] 00:22:06,129 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 273 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-02-24 00:22:06,138] [main] java.version = 1.8.0_342 [testng] 00:22:06,142 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:22:06,142 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:06,187 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-02-24_00-22-06.log] [testng] 00:22:06,188 |-INFO in ch.qos.logback.core.sift.SiftProcessor@765d7657 - End of configuration. [testng] [2025-02-24 00:22:06,190] [main] testng.directory = /data [testng] [2025-02-24 00:22:06,190] [main] testng.configDirectory = /config [testng] [2025-02-24 00:22:06,202] [main] testng.multiplier = 1.0 [testng] [2025-02-24 00:22:06,202] [main] testng.in-memory = false [testng] [2025-02-24 00:22:06,202] [main] testng.allow-missing = false [testng] [2025-02-24 00:22:06,202] [main] user.language = fr [testng] [2025-02-24 00:22:06,202] [main] user.country = FR [testng] [2025-02-24 00:22:06,202] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2025-02-24 00:22:09,589] [main] ---------------------------------------- [testng] [2025-02-24 00:22:09,589] [main] Total files: 103 [testng] [2025-02-24 00:22:09,589] [main] Scan time: 3.387 s (32 ms/file) [testng] [2025-02-24 00:22:09,589] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-02-24 00:22:24,252] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] 00:22:24,252 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:22:24,252 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:24,253 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-02-24_00-22-24.log] [testng] 00:22:24,253 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3eb14b4b - End of configuration. [testng] [2025-02-24 00:22:24,380] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] 00:22:24,381 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:22:24,381 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:24,381 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-02-24_00-22-24.log] [testng] 00:22:24,382 |-INFO in ch.qos.logback.core.sift.SiftProcessor@525c9df7 - End of configuration. [testng] [2025-02-24 00:22:24,499] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] 00:22:24,499 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:22:24,499 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:24,500 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-02-24_00-22-24.log] [testng] 00:22:24,500 |-INFO in ch.qos.logback.core.sift.SiftProcessor@50ed886d - End of configuration. [testng] [2025-02-24 00:22:24,600] [pool-1-thread-10] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] 00:22:24,600 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:22:24,600 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:24,601 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-02-24_00-22-24.log] [testng] 00:22:24,601 |-INFO in ch.qos.logback.core.sift.SiftProcessor@33509868 - End of configuration. [testng] [2025-02-24 00:22:25,187] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] 00:22:25,187 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:22:25,187 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:25,188 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-02-24_00-22-25.log] [testng] 00:22:25,188 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e6a3ecd - End of configuration. [testng] [2025-02-24 00:22:25,287] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] 00:22:25,287 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:22:25,287 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:25,288 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-02-24_00-22-25.log] [testng] 00:22:25,288 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7461f431 - End of configuration. [testng] [2025-02-24 00:22:26,062] [pool-1-thread-7] Initializing /data/qa-7642/8.dm4: [testng] 00:22:26,062 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:22:26,062 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:26,063 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-02-24_00-22-26.log] [testng] 00:22:26,063 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52c8ffb1 - End of configuration. [testng] [2025-02-24 00:22:26,212] [pool-1-thread-6] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] 00:22:26,212 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:22:26,212 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:26,213 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-02-24_00-22-26.log] [testng] 00:22:26,213 |-INFO in ch.qos.logback.core.sift.SiftProcessor@33963deb - End of configuration. [testng] [2025-02-24 00:22:27,028] [pool-1-thread-5] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] 00:22:27,029 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:22:27,029 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:27,029 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-02-24_00-22-27.log] [testng] 00:22:27,030 |-INFO in ch.qos.logback.core.sift.SiftProcessor@62b9cdda - End of configuration. [testng] [2025-02-24 00:22:27,146] [pool-1-thread-4] Initializing /data/jay/dnasample.tif: [testng] 00:22:27,146 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:22:27,146 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:27,147 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-02-24_00-22-27.log] [testng] 00:22:27,147 |-INFO in ch.qos.logback.core.sift.SiftProcessor@520038fc - End of configuration. [testng] [2025-02-24 00:22:28,419] [pool-1-thread-3] Initializing /data/jay/biosamplefullframetif.tif: [testng] 00:22:28,419 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:22:28,419 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:28,420 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-02-24_00-22-28.log] [testng] 00:22:28,420 |-INFO in ch.qos.logback.core.sift.SiftProcessor@34f0d812 - End of configuration. [testng] [2025-02-24 00:22:29,538] [pool-1-thread-2] Initializing /data/jay/DMtest2.dm3: [testng] 00:22:29,538 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:22:29,538 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:29,539 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-02-24_00-22-29.log] [testng] 00:22:29,539 |-INFO in ch.qos.logback.core.sift.SiftProcessor@531da48e - End of configuration. [testng] [2025-02-24 00:22:33,301] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2025-02-24 00:22:33,433] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2025-02-24 00:22:34,115] [pool-1-thread-7] Initializing /data/jay/ViewDMtest.dm3: [testng] [2025-02-24 00:22:34,348] [pool-1-thread-12] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2025-02-24 00:22:34,531] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2025-02-24 00:22:36,209] [pool-1-thread-2] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2025-02-24 00:22:37,817] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2025-02-24 00:22:38,204] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] [2025-02-24 00:22:38,443] [pool-1-thread-6] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2025-02-24 00:22:39,691] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2025-02-24 00:22:40,366] [pool-1-thread-11] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2025-02-24 00:22:42,061] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2025-02-24 00:22:43,027] [pool-1-thread-4] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2025-02-24 00:22:43,325] [pool-1-thread-7] Initializing /data/chip/Nanogold-1.dm3: [testng] [2025-02-24 00:22:44,012] [pool-1-thread-3] Initializing /data/jay/samples/APC2a-e4.tif: [testng] [2025-02-24 00:22:46,293] [pool-1-thread-4] Initializing /data/jay/recAmaghi.dm3: [testng] [2025-02-24 00:22:46,452] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2025-02-24 00:22:46,871] [pool-1-thread-5] Initializing /data/jay/DMtest.dm3: [testng] [2025-02-24 00:22:47,202] [pool-1-thread-1] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2025-02-24 00:22:48,422] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2025-02-24 00:22:48,834] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2025-02-24 00:22:50,267] [pool-1-thread-7] Initializing /data/qa-21761/example.dm4: [testng] [2025-02-24 00:22:51,124] [pool-1-thread-10] Initializing /data/ofra/lowloss.dm3: [testng] [2025-02-24 00:22:51,318] [pool-1-thread-3] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2025-02-24 00:22:52,184] [pool-1-thread-2] Initializing /data/melissa/annotation-test.dm3: [testng] [2025-02-24 00:22:52,331] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2025-02-24 00:22:52,820] [pool-1-thread-6] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2025-02-24 00:22:53,702] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2025-02-24 00:22:53,837] [pool-1-thread-1] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2025-02-24 00:22:53,964] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2025-02-24 00:22:54,150] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] [2025-02-24 00:22:54,293] [pool-1-thread-10] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] [2025-02-24 00:22:54,450] [pool-1-thread-9] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2025-02-24 00:22:54,631] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] [2025-02-24 00:22:55,902] [pool-1-thread-2] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] [2025-02-24 00:22:57,636] [pool-1-thread-4] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] [2025-02-24 00:22:58,604] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2025-02-24 00:22:58,733] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2025-02-24 00:22:58,966] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] [2025-02-24 00:22:59,770] [pool-1-thread-12] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] [2025-02-24 00:23:01,605] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2025-02-24 00:23:01,888] [pool-1-thread-10] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2025-02-24 00:23:02,036] [pool-1-thread-3] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2025-02-24 00:23:02,974] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2025-02-24 00:23:03,221] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2025-02-24 00:23:03,590] [pool-1-thread-5] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2025-02-24 00:23:04,516] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2025-02-24 00:23:05,274] [pool-1-thread-2] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2025-02-24 00:23:06,463] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2025-02-24 00:23:07,468] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2025-02-24 00:23:07,639] [pool-1-thread-12] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2025-02-24 00:23:07,988] [pool-1-thread-1] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2025-02-24 00:23:09,129] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2025-02-24 00:23:09,246] [pool-1-thread-9] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2025-02-24 00:23:10,455] [pool-1-thread-7] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2025-02-24 00:23:10,606] [pool-1-thread-4] Initializing /data/samples/test-tiles.dm3: [testng] [2025-02-24 00:23:12,858] [pool-1-thread-4] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2025-02-24 00:23:13,058] [pool-1-thread-3] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2025-02-24 00:23:13,487] [pool-1-thread-10] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2025-02-24 00:23:15,903] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2025-02-24 00:23:16,058] [pool-1-thread-8] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2025-02-24 00:23:16,244] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2025-02-24 00:23:16,471] [pool-1-thread-12] Initializing /data/melissa/annotation-test.tif: [testng] [2025-02-24 00:23:17,507] [pool-1-thread-9] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2025-02-24 00:23:17,691] [pool-1-thread-7] Initializing /data/jay/graphitedm3.dm3: [testng] [2025-02-24 00:23:19,353] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [2025-02-24 00:23:20,336] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2025-02-24 00:23:20,650] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2025-02-24 00:23:20,913] [pool-1-thread-10] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2025-02-24 00:23:22,326] [pool-1-thread-3] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2025-02-24 00:23:22,461] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2025-02-24 00:23:22,645] [pool-1-thread-4] Initializing /data/jay/Carbon.34.dm3: [testng] [2025-02-24 00:23:23,562] [pool-1-thread-8] Initializing /data/jay/smallerfile.dm3: [testng] [2025-02-24 00:23:24,194] [pool-1-thread-7] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2025-02-24 00:23:25,121] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] [2025-02-24 00:23:25,585] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2025-02-24 00:23:26,015] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2025-02-24 00:23:27,138] [pool-1-thread-12] Initializing /data/jay/camtest1.dm3: [testng] [2025-02-24 00:23:27,506] [pool-1-thread-2] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] [2025-02-24 00:23:28,624] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] [2025-02-24 00:23:29,201] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2025-02-24 00:23:29,466] [pool-1-thread-4] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] [2025-02-24 00:23:31,000] [pool-1-thread-7] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2025-02-24 00:23:32,267] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2025-02-24 00:23:32,463] [pool-1-thread-8] Initializing /data/jay/dnasample1.dm3: [testng] [2025-02-24 00:23:32,875] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 44 seconds Finished: SUCCESS