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Started by upstream project "BIOFORMATS-test-repo" build number 358
originally caused by:
 Started by upstream project "Trigger" build number 384
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4
[BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins12640820117028120710.sh
+ '[' afi = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_57054_merge_ci -v /uod/idr/repos/curated/afi:/data -v /uod/idr-scratch/merge-ci/curated/afi:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 01:36:09,353 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15
   [testng] 01:36:09,354 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - No custom configurators were discovered as a service.
   [testng] 01:36:09,354 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:36:09,355 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:36:09,356 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:36:09,356 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:36:09,357 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:36:09,357 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:36:09,357 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:36:09,357 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:36:09,358 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:36:09,358 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:36:09,522 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:36:09,522 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:36:09,545 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:36:09,545 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:36:09,550 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:36:09,551 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:36:09,551 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:36:09,551 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:36:09,551 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@3f6f6701 - End of configuration.
   [testng] 01:36:09,552 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@4f80542f - Registering current configuration as safe fallback point
   [testng] 01:36:09,552 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 195 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2025-02-26 01:36:09,562] [main] java.version = 17.0.2
   [testng] 01:36:09,565 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:36:09,565 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:09,606 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-02-26_01-36-09.log]
   [testng] 01:36:09,607 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14bdbc74 - End of configuration.
   [testng] [2025-02-26 01:36:09,609] [main] testng.directory = /data
   [testng] [2025-02-26 01:36:09,610] [main] testng.configDirectory = /config
   [testng] [2025-02-26 01:36:09,619] [main] testng.multiplier = 1.0
   [testng] [2025-02-26 01:36:09,620] [main] testng.in-memory = false
   [testng] [2025-02-26 01:36:09,620] [main] testng.allow-missing = false
   [testng] [2025-02-26 01:36:09,620] [main] user.language = en
   [testng] [2025-02-26 01:36:09,620] [main] user.country = ${user.country}
   [testng] [2025-02-26 01:36:09,620] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2025-02-26 01:36:11,912] [main] ----------------------------------------
   [testng] [2025-02-26 01:36:11,912] [main] Total files: 16
   [testng] [2025-02-26 01:36:11,912] [main] Scan time: 2.292 s (143 ms/file)
   [testng] [2025-02-26 01:36:11,912] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 15 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2025-02-26 01:36:29,501] [pool-1-thread-1] Initializing /data/samples/5343.afi: 
   [testng] 01:36:29,502 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:36:29,502 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:29,503 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-02-26_01-36-29.log]
   [testng] 01:36:29,504 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c62aebd - End of configuration.
   [testng] [2025-02-26 01:36:30,015] [pool-1-thread-12] Initializing /data/samples/5400.afi: 
   [testng] 01:36:30,015 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:36:30,015 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:30,016 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-02-26_01-36-30.log]
   [testng] 01:36:30,016 |-INFO in ch.qos.logback.core.sift.SiftProcessor@10cc5309 - End of configuration.
   [testng] [2025-02-26 01:36:30,593] [pool-1-thread-11] Initializing /data/samples/5347.afi: 
   [testng] 01:36:30,594 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:36:30,594 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:30,594 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-02-26_01-36-30.log]
   [testng] 01:36:30,595 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6712bb1 - End of configuration.
   [testng] [2025-02-26 01:36:31,036] [pool-1-thread-10] Initializing /data/samples/5446.afi: 
   [testng] 01:36:31,036 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:36:31,036 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:31,037 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-02-26_01-36-31.log]
   [testng] 01:36:31,037 |-INFO in ch.qos.logback.core.sift.SiftProcessor@74b2f251 - End of configuration.
   [testng] [2025-02-26 01:36:31,523] [pool-1-thread-9] Initializing /data/samples/5339.afi: 
   [testng] 01:36:31,523 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:36:31,523 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:31,523 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-02-26_01-36-31.log]
   [testng] 01:36:31,524 |-INFO in ch.qos.logback.core.sift.SiftProcessor@323d77ff - End of configuration.
   [testng] [2025-02-26 01:36:32,001] [pool-1-thread-8] Initializing /data/samples/5371.afi: 
   [testng] 01:36:32,002 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:36:32,002 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:32,003 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-02-26_01-36-32.log]
   [testng] 01:36:32,003 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6ed7a0df - End of configuration.
   [testng] [2025-02-26 01:36:32,502] [pool-1-thread-7] Initializing /data/samples/5414.afi: 
   [testng] 01:36:32,503 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:36:32,503 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:32,504 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-02-26_01-36-32.log]
   [testng] 01:36:32,504 |-INFO in ch.qos.logback.core.sift.SiftProcessor@73cf3d77 - End of configuration.
   [testng] [2025-02-26 01:36:33,001] [pool-1-thread-6] Initializing /data/samples/5351.afi: 
   [testng] 01:36:33,001 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:36:33,001 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:33,002 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-02-26_01-36-33.log]
   [testng] 01:36:33,003 |-INFO in ch.qos.logback.core.sift.SiftProcessor@515407a2 - End of configuration.
   [testng] [2025-02-26 01:36:33,485] [pool-1-thread-5] Initializing /data/samples/5358.afi: 
   [testng] 01:36:33,485 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:36:33,485 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:33,486 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-02-26_01-36-33.log]
   [testng] 01:36:33,486 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3dc529dc - End of configuration.
   [testng] [2025-02-26 01:36:33,976] [pool-1-thread-4] Initializing /data/samples/5440.afi: 
   [testng] 01:36:33,976 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:36:33,976 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:33,977 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-02-26_01-36-33.log]
   [testng] 01:36:33,978 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4ff97b8d - End of configuration.
   [testng] [2025-02-26 01:36:34,543] [pool-1-thread-3] Initializing /data/samples/5365.afi: 
   [testng] 01:36:34,543 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:36:34,543 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:34,544 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-02-26_01-36-34.log]
   [testng] 01:36:34,544 |-INFO in ch.qos.logback.core.sift.SiftProcessor@76f6c096 - End of configuration.
   [testng] [2025-02-26 01:36:35,022] [pool-1-thread-2] Initializing /data/samples/5383.afi: 
   [testng] 01:36:35,022 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:36:35,022 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:35,023 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-02-26_01-36-35.log]
   [testng] 01:36:35,023 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15aec80c - End of configuration.
   [testng] [2025-02-26 01:37:17,742] [pool-1-thread-7] Initializing /data/samples/5407.afi: 
   [testng] [2025-02-26 01:37:21,506] [pool-1-thread-10] Initializing /data/samples/5387.afi: 
   [testng] [2025-02-26 01:37:22,279] [pool-1-thread-5] Initializing /data/samples/5306.afi: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 795, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 2 minutes 6 seconds
Finished: SUCCESS