Skip to content

Console Output

Started by upstream project "BIOFORMATS-test-repo" build number 41
originally caused by:
 Started by upstream project "Trigger" build number 47
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6
[BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins9621841845905618738.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_5723_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test

test-automated:
   [testng] File leak detector installed
   [testng] 01:22:23,517 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:22:23,519 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
   [testng] 01:22:23,519 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:22:23,520 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:22:23,520 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:22:23,520 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:22:23,520 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:22:23,520 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:22:23,521 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:22:23,521 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:22:23,521 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:22:23,521 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:22:23,798 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:22:23,798 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:22:23,828 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:22:23,828 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:22:23,838 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:22:23,838 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:22:23,838 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:22:23,838 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:22:23,839 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
   [testng] 01:22:23,839 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
   [testng] 01:22:23,840 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 319 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-04-22 01:22:23,850] [main] java.version = 1.8.0_342
   [testng] 01:22:23,854 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:22:23,854 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:22:23,902 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-22_01-22-23.log]
   [testng] 01:22:23,903 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
   [testng] [2024-04-22 01:22:23,906] [main] testng.directory = /data
   [testng] [2024-04-22 01:22:23,906] [main] testng.configDirectory = /config
   [testng] [2024-04-22 01:22:23,919] [main] testng.multiplier = 1.0
   [testng] [2024-04-22 01:22:23,919] [main] testng.in-memory = false
   [testng] [2024-04-22 01:22:23,919] [main] testng.allow-missing = false
   [testng] [2024-04-22 01:22:23,919] [main] user.language = fr
   [testng] [2024-04-22 01:22:23,919] [main] user.country = FR
   [testng] [2024-04-22 01:22:23,919] [main] Maximum heap size = 13653 MB
   [testng] Scanning for files...
   [testng] [2024-04-22 01:22:45,549] [main] ----------------------------------------
   [testng] [2024-04-22 01:22:45,550] [main] Total files: 283
   [testng] [2024-04-22 01:22:45,550] [main] Scan time: 21.629 s (76 ms/file)
   [testng] [2024-04-22 01:22:45,550] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 186 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-04-22 01:32:12,569] [pool-1-thread-1] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets: 
   [testng] 01:32:12,570 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:32:12,570 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:32:12,571 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-22_01-32-12.log]
   [testng] 01:32:12,571 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3b39e448 - End of configuration.
   [testng] [2024-04-22 01:32:12,604] [pool-1-thread-12] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif: 
   [testng] 01:32:12,604 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:32:12,604 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:32:12,605 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-22_01-32-12.log]
   [testng] 01:32:12,606 |-INFO in ch.qos.logback.core.sift.SiftProcessor@313529fd - End of configuration.
   [testng] [2024-04-22 01:32:12,775] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: 
   [testng] 01:32:12,776 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:32:12,776 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:32:12,777 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-22_01-32-12.log]
   [testng] 01:32:12,777 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e51245e - End of configuration.
   [testng] [2024-04-22 01:32:12,867] [pool-1-thread-10] Initializing /data/qa-17270/stack1.ome.tif: 
   [testng] 01:32:12,867 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:32:12,867 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:32:12,868 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-22_01-32-12.log]
   [testng] 01:32:12,869 |-INFO in ch.qos.logback.core.sift.SiftProcessor@280cbf00 - End of configuration.
   [testng] [2024-04-22 01:32:13,007] [pool-1-thread-9] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: 
   [testng] 01:32:13,008 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:32:13,008 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:32:13,008 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-22_01-32-13.log]
   [testng] 01:32:13,009 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b17e242 - End of configuration.
   [testng] [2024-04-22 01:32:13,149] [pool-1-thread-8] Initializing /data/public/etienne/coupe shg stack_0001.oir: 
   [testng] 01:32:13,150 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:32:13,150 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:32:13,151 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-22_01-32-13.log]
   [testng] 01:32:13,152 |-INFO in ch.qos.logback.core.sift.SiftProcessor@676b8366 - End of configuration.
   [testng] [2024-04-22 01:32:13,476] [pool-1-thread-7] Initializing /data/qa-16881/P10D1 20150729_0019.oir: 
   [testng] 01:32:13,477 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:32:13,477 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:32:13,477 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-22_01-32-13.log]
   [testng] 01:32:13,478 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f640948 - End of configuration.
   [testng] [2024-04-22 01:32:13,780] [pool-1-thread-6] Initializing /data/qa-16881/P10D1 20150729.oir: 
   [testng] 01:32:13,781 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:32:13,781 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:32:13,781 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-22_01-32-13.log]
   [testng] 01:32:13,782 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15be957d - End of configuration.
   [testng] [2024-04-22 01:32:14,027] [pool-1-thread-5] Initializing /data/olympus/spectral_scan_XYL.oir: 
   [testng] 01:32:14,027 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:32:14,027 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:32:14,028 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-22_01-32-14.log]
   [testng] 01:32:14,028 |-INFO in ch.qos.logback.core.sift.SiftProcessor@163034f8 - End of configuration.
   [testng] [2024-04-22 01:32:14,922] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif: 
   [testng] 01:32:14,923 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:32:14,923 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:32:14,923 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-22_01-32-14.log]
   [testng] 01:32:14,924 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13007a2f - End of configuration.
   [testng] [2024-04-22 01:32:14,964] [pool-1-thread-3] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: 
   [testng] 01:32:14,964 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:32:14,964 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:32:14,965 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-22_01-32-14.log]
   [testng] 01:32:14,966 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5fef2c15 - End of configuration.
   [testng] [2024-04-22 01:32:15,011] [pool-1-thread-2] Initializing /data/qa-17270/alexa488.oir: 
   [testng] 01:32:15,011 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:32:15,012 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:32:15,012 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-22_01-32-15.log]
   [testng] 01:32:15,013 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f7a125c - End of configuration.
   [testng] [2024-04-22 01:32:17,942] [pool-1-thread-11] Initializing /data/olympus/2017-04-20/Clipboard.tif: 
   [testng] [2024-04-22 01:32:17,994] [pool-1-thread-10] Initializing /data/olympus/Clipboard-XYZt.tif: 
   [testng] [2024-04-22 01:32:18,044] [pool-1-thread-4] Initializing /data/qa-16881/P10-50 D2.ome.tif: 
   [testng] [2024-04-22 01:32:18,450] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: 
   [testng] [2024-04-22 01:32:18,701] [pool-1-thread-1] Initializing /data/qa-17270/Clipboard-alexa488.tif: 
   [testng] [2024-04-22 01:32:18,862] [pool-1-thread-2] Initializing /data/public/etienne/Clipboard-venus stack.tif: 
   [testng] [2024-04-22 01:32:19,841] [pool-1-thread-10] Initializing /data/qa-17270/image1.oir: 
   [testng] [2024-04-22 01:32:19,963] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif: 
   [testng] [2024-04-22 01:32:20,023] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: 
   [testng] [2024-04-22 01:32:20,588] [pool-1-thread-3] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir: 
   [testng] [2024-04-22 01:32:21,923] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: 
   [testng] [2024-04-22 01:32:22,828] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: 
   [testng] [2024-04-22 01:32:22,878] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: 
   [testng] [2024-04-22 01:32:22,921] [pool-1-thread-8] Initializing /data/qa-16871/Clipboard.tif: 
   [testng] [2024-04-22 01:32:23,008] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif: 
   [testng] [2024-04-22 01:32:23,067] [pool-1-thread-1] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif: 
   [testng] [2024-04-22 01:32:23,203] [pool-1-thread-9] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: 
   [testng] [2024-04-22 01:32:23,771] [pool-1-thread-10] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: 
   [testng] [2024-04-22 01:32:24,361] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: 
   [testng] [2024-04-22 01:32:24,886] [pool-1-thread-7] Initializing /data/qa-17270/alexa488.ome.tif: 
   [testng] [2024-04-22 01:32:25,159] [pool-1-thread-12] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info: 
   [testng] [2024-04-22 01:32:28,961] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: 
   [testng] [2024-04-22 01:32:29,197] [pool-1-thread-8] Initializing /data/olympus/40X_4CH_XY.oir: 
   [testng] [2024-04-22 01:32:29,473] [pool-1-thread-2] Initializing /data/qa-17270/stack1.oir: 
   [testng] [2024-04-22 01:32:32,392] [pool-1-thread-4] Initializing /data/qa-17335/OSR-Z.oir: 
   [testng] [2024-04-22 01:32:32,529] [pool-1-thread-1] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: 
   [testng] [2024-04-22 01:32:32,784] [pool-1-thread-6] Initializing /data/olympus/Stitched_XYZ.vsi: 
   [testng] [2024-04-22 01:32:33,679] [pool-1-thread-11] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: 
   [testng] [2024-04-22 01:32:37,963] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: 
   [testng] [2024-04-22 01:32:39,092] [pool-1-thread-7] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: 
   [testng] [2024-04-22 01:32:39,480] [pool-1-thread-9] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: 
   [testng] [2024-04-22 01:32:40,000] [pool-1-thread-6] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: 
   [testng] [2024-04-22 01:32:50,758] [pool-1-thread-8] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir: 
   [testng] [2024-04-22 01:32:51,053] [pool-1-thread-4] Initializing /data/qa-21508/Stitch_A01_G008.oir: 
   [testng] [2024-04-22 01:32:52,063] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif: 
   [testng] [2024-04-22 01:32:52,870] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir: 
   [testng] [2024-04-22 01:32:53,139] [pool-1-thread-5] Initializing /data/qa-17331/60x zstack RS.ome.tif: 
   [testng] [2024-04-22 01:32:53,224] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: 
   [testng] [2024-04-22 01:32:53,953] [pool-1-thread-7] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif: 
   [testng] [2024-04-22 01:32:54,278] [pool-1-thread-8] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets: 
   [testng] [2024-04-22 01:32:54,355] [pool-1-thread-1] Initializing /data/olympus/calcium sparks_XYt.ome.tif: 
   [testng] [2024-04-22 01:32:54,993] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif: 
   [testng] [2024-04-22 01:32:55,240] [pool-1-thread-7] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif: 
   [testng] [2024-04-22 01:32:55,404] [pool-1-thread-9] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info: 
   [testng] [2024-04-22 01:33:04,664] [pool-1-thread-8] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif: 
   [testng] [2024-04-22 01:33:05,943] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: 
   [testng] [2024-04-22 01:33:06,082] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2_0019.oir: 
   [testng] [2024-04-22 01:33:07,193] [pool-1-thread-7] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: 
   [testng] [2024-04-22 01:33:08,711] [pool-1-thread-8] Initializing /data/olympus/Stitched_XYZ.ome.tif: 
   [testng] [2024-04-22 01:33:09,340] [pool-1-thread-10] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir: 
   [testng] [2024-04-22 01:33:10,531] [pool-1-thread-5] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif: 
   [testng] [2024-04-22 01:33:12,666] [pool-1-thread-5] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif: 
   [testng] [2024-04-22 01:33:12,713] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: 
   [testng] [2024-04-22 01:33:13,523] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: 
   [testng] [2024-04-22 01:33:16,238] [pool-1-thread-10] Initializing /data/public/etienne/venus stack.ome.tif: 
   [testng] [2024-04-22 01:33:16,319] [pool-1-thread-5] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: 
   [testng] [2024-04-22 01:33:21,155] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif: 
   [testng] [2024-04-22 01:33:22,312] [pool-1-thread-10] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif: 
   [testng] [2024-04-22 01:33:23,016] [pool-1-thread-1] Initializing /data/qa-17331/60x zstack RS.oir: 
   [testng] [2024-04-22 01:33:23,647] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/Clipboard.tif: 
   [testng] [2024-04-22 01:33:24,112] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir: 
   [testng] [2024-04-22 01:33:25,002] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir: 
   [testng] [2024-04-22 01:33:25,091] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: 
   [testng] [2024-04-22 01:33:28,589] [pool-1-thread-8] Initializing /data/qa-17335/1.ome.tif: 
   [testng] [2024-04-22 01:33:29,104] [pool-1-thread-3] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir: 
   [testng] [2024-04-22 01:33:29,778] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif: 
   [testng] [2024-04-22 01:33:31,082] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir: 
   [testng] [2024-04-22 01:33:31,327] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: 
   [testng] [2024-04-22 01:33:31,584] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir: 
   [testng] [2024-04-22 01:33:32,184] [pool-1-thread-8] Initializing /data/olympus/40X_4CH_XY.ome.tif: 
   [testng] [2024-04-22 01:33:32,671] [pool-1-thread-3] Initializing /data/qa-17270/Clipboard-stack1.tif: 
   [testng] [2024-04-22 01:33:32,906] [pool-1-thread-1] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir: 
   [testng] [2024-04-22 01:37:01,957] [pool-1-thread-7] Initializing /data/qa-17335/Clipboard-1.tif: 
   [testng] [2024-04-22 01:37:04,004] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: 
   [testng] [2024-04-22 01:37:04,446] [pool-1-thread-7] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif: 
   [testng] [2024-04-22 01:37:05,811] [pool-1-thread-3] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif: 
   [testng] [2024-04-22 01:37:06,106] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif: 
   [testng] [2024-04-22 01:37:07,240] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif: 
   [testng] [2024-04-22 01:37:07,492] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif: 
   [testng] [2024-04-22 01:37:07,794] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: 
   [testng] [2024-04-22 01:37:07,997] [pool-1-thread-4] Initializing /data/qa-16881/P10-50 D2_0006.oir: 
   [testng] [2024-04-22 01:37:09,140] [pool-1-thread-8] Initializing /data/qa-16881/P10-50 D2.oir: 
   [testng] [2024-04-22 01:37:10,185] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/zebra shg.oir: 
   [testng] [2024-04-22 01:37:19,214] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif: 
   [testng] [2024-04-22 01:37:20,365] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif: 
   [testng] [2024-04-22 01:37:21,268] [pool-1-thread-2] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir: 
   [testng] [2024-04-22 01:37:47,472] [pool-1-thread-7] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir: 
   [testng] [2024-04-22 01:37:49,017] [pool-1-thread-4] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif: 
   [testng] [2024-04-22 01:37:49,956] [pool-1-thread-8] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: 
   [testng] [2024-04-22 01:37:50,527] [pool-1-thread-4] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: 
   [testng] [2024-04-22 01:37:55,003] [pool-1-thread-5] Initializing /data/olympus/XYZt.vsi: 
   [testng] [2024-04-22 01:37:55,745] [pool-1-thread-5] Initializing /data/qa-17409/Stitch_A01_G001.oir: 
   [testng] [2024-04-22 01:37:59,668] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: 
   [testng] [2024-04-22 01:38:00,225] [pool-1-thread-10] Initializing /data/olympus/Stitched_XYZ.oir: 
   [testng] [2024-04-22 01:38:03,456] [pool-1-thread-11] Initializing /data/qa-17270/Clipboard-image1.tif: 
   [testng] [2024-04-22 01:38:04,178] [pool-1-thread-8] Initializing /data/qa-17293/Clipboard.tif: 
   [testng] [2024-04-22 01:38:04,821] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif: 
   [testng] [2024-04-22 01:38:05,368] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif: 
   [testng] [2024-04-22 01:38:05,647] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: 
   [testng] [2024-04-22 01:38:06,134] [pool-1-thread-11] Initializing /data/qa-17922/example_multipart.oir: 
   [testng] [2024-04-22 01:38:48,914] [pool-1-thread-8] Initializing /data/qa-17335/OSR-Z.ome.tif: 
   [testng] [2024-04-22 01:38:48,967] [pool-1-thread-7] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir: 
   [testng] [2024-04-22 01:38:51,625] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: 
   [testng] [2024-04-22 01:38:51,925] [pool-1-thread-8] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif: 
   [testng] [2024-04-22 01:38:53,427] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir: 
   [testng] [2024-04-22 01:39:00,619] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif: 
   [testng] [2024-04-22 01:39:01,659] [pool-1-thread-7] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: 
   [testng] [2024-04-22 01:39:02,257] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif: 
   [testng] [2024-04-22 01:39:03,391] [pool-1-thread-10] Initializing /data/qa-17335/Clipboard-OSR-Z.tif: 
   [testng] [2024-04-22 01:39:03,481] [pool-1-thread-4] Initializing /data/olympus/calcium sparks.jpg: 
   [testng] [2024-04-22 01:39:04,882] [pool-1-thread-10] Initializing /data/cudmore/20190401__0005.oir: 
   [testng] [2024-04-22 01:39:22,086] [pool-1-thread-2] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir: 
   [testng] [2024-04-22 01:40:23,986] [pool-1-thread-3] Initializing /data/qa-17270/image1.ome.tif: 
   [testng] [2024-04-22 01:40:24,149] [pool-1-thread-4] Initializing /data/public/etienne/amy slice z stack_0001.oir: 
   [testng] [2024-04-22 01:40:25,795] [pool-1-thread-7] Initializing /data/qa-17919/f10187.oir: 
   [testng] [2024-04-22 01:41:33,123] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: 
   [testng] [2024-04-22 01:41:33,216] [pool-1-thread-6] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif: 
   [testng] [2024-04-22 01:41:33,513] [pool-1-thread-12] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info: 
   [testng] [2024-04-22 01:41:33,609] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: 
   [testng] [2024-04-22 01:41:34,505] [pool-1-thread-8] Initializing /data/olympus/40X_4CH_XY.vsi: 
   [testng] [2024-04-22 01:41:34,631] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: 
   [testng] [2024-04-22 01:41:34,717] [pool-1-thread-3] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir: 
   [testng] [2024-04-22 01:41:35,113] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: 
   [testng] [2024-04-22 01:41:36,188] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif: 
   [testng] [2024-04-22 01:41:37,077] [pool-1-thread-4] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: 
   [testng] [2024-04-22 01:41:38,659] [pool-1-thread-8] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: 
   [testng] [2024-04-22 01:41:38,668] [pool-1-thread-5] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir: 
   [testng] [2024-04-22 01:41:39,190] [pool-1-thread-8] Initializing /data/olympus/calcium sparks_XYt.oir: 
   [testng] [2024-04-22 01:41:42,953] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: 
   [testng] [2024-04-22 01:41:44,450] [pool-1-thread-3] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: 
   [testng] [2024-04-22 01:41:44,759] [pool-1-thread-12] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif: 
   [testng] [2024-04-22 01:41:45,684] [pool-1-thread-5] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: 
   [testng] [2024-04-22 01:41:47,407] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir: 
   [testng] [2024-04-22 01:41:50,547] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif: 
   [testng] [2024-04-22 01:41:50,890] [pool-1-thread-12] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: 
   [testng] [2024-04-22 01:41:52,466] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif: 
   [testng] [2024-04-22 01:41:53,453] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif: 
   [testng] [2024-04-22 01:41:54,240] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi: 
   [testng] [2024-04-22 01:41:55,204] [pool-1-thread-12] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif: 
   [testng] [2024-04-22 01:41:55,280] [pool-1-thread-4] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: 
   [testng] [2024-04-22 01:41:56,127] [pool-1-thread-3] Initializing /data/olympus/XYZt.ome.tif: 
   [testng] [2024-04-22 01:42:01,276] [pool-1-thread-12] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: 
   [testng] [2024-04-22 01:42:02,269] [pool-1-thread-4] Initializing /data/qa-16881/P10D1 20150729_0024.oir: 
   [testng] [2024-04-22 01:42:03,846] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif: 
   [testng] [2024-04-22 01:42:05,485] [pool-1-thread-5] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif: 
   [testng] [2024-04-22 01:42:06,597] [pool-1-thread-3] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: 
   [testng] [2024-04-22 01:42:07,686] [pool-1-thread-5] Initializing /data/qa-16881/P10D1 20150729.ome.tif: 
   [testng] [2024-04-22 01:42:08,711] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif: 
   [testng] [2024-04-22 01:42:09,073] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif: 
   [testng] [2024-04-22 01:42:10,490] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir: 
   [testng] [2024-04-22 01:42:16,993] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir: 
   [testng] [2024-04-22 01:42:17,958] [pool-1-thread-12] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif: 
   [testng] [2024-04-22 01:42:18,221] [pool-1-thread-3] Initializing /data/olympus/XYZt.oir: 
   [testng] [2024-04-22 01:42:32,422] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: 
   [testng] [2024-04-22 01:42:32,485] [pool-1-thread-4] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: 
   [testng] [2024-04-22 01:42:32,591] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: 
   [testng] [2024-04-22 01:42:33,847] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir: 
   [testng] [2024-04-22 01:42:34,198] [pool-1-thread-9] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: 
   [testng] [2024-04-22 01:42:34,735] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: 
   [testng] [2024-04-22 01:42:35,350] [pool-1-thread-4] Initializing /data/olympus/spectral_scan_XYL.ome.tif: 
   [testng] [2024-04-22 01:42:36,315] [pool-1-thread-6] Initializing /data/qa-17335/stimulation_0001_LSM.oir: 
   [testng] [2024-04-22 01:42:38,519] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: 
   [testng] [2024-04-22 01:42:40,410] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: 
   [testng] [2024-04-22 01:42:40,910] [pool-1-thread-4] Initializing /data/qa-16871/XY_0003.oir: 
   [testng] [2024-04-22 01:42:41,432] [pool-1-thread-9] Initializing /data/qa-16871/XY_0003.ome.tif: 
   [testng] [2024-04-22 01:42:41,543] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: 
   [testng] [2024-04-22 01:42:44,397] [pool-1-thread-12] Initializing /data/qa-17409/Clipboard.tif: 
   [testng] [2024-04-22 01:42:44,759] [pool-1-thread-4] Initializing /data/qa-17917/f10010.oir: 
   [testng] [2024-04-22 01:44:00,340] [pool-1-thread-9] Initializing /data/qa-17335/1.oir: 
   [testng] [2024-04-22 01:44:00,883] [pool-1-thread-12] Initializing /data/qa-17331/Clipboard.tif: 
   [testng] [2024-04-22 01:44:01,189] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif: 
   [testng] [2024-04-22 01:44:02,079] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif: 
   [testng] [2024-04-22 01:44:02,400] [pool-1-thread-9] Initializing /data/public/etienne/venus stack.oir: 
   [testng] [2024-04-22 01:44:07,529] [pool-1-thread-12] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 9858, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 68 minutes 37 seconds
Finished: SUCCESS