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Started by upstream project "BIOFORMATS-test-repo" build number 362 originally caused by: Started by upstream project "Trigger" build number 388 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins6404027957296617344.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_57675_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 00:44:50,870 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 00:44:50,872 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - No custom configurators were discovered as a service. [testng] 00:44:50,872 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:44:50,873 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:44:50,873 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:44:50,873 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:44:50,874 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:44:50,874 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:44:50,875 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:44:50,875 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:44:50,875 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:44:50,876 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:44:51,054 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:44:51,054 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:44:51,080 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:44:51,080 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:44:51,086 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:44:51,086 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:44:51,086 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:44:51,087 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:44:51,087 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@3f6f6701 - End of configuration. [testng] 00:44:51,088 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@4f80542f - Registering current configuration as safe fallback point [testng] 00:44:51,088 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 213 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-02 00:44:51,097] [main] java.version = 17.0.2 [testng] 00:44:51,102 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:44:51,102 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:44:51,148 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-02_00-44-51.log] [testng] 00:44:51,150 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14bdbc74 - End of configuration. [testng] [2025-03-02 00:44:51,152] [main] testng.directory = /data [testng] [2025-03-02 00:44:51,152] [main] testng.configDirectory = /config [testng] [2025-03-02 00:44:51,161] [main] testng.multiplier = 1.0 [testng] [2025-03-02 00:44:51,162] [main] testng.in-memory = false [testng] [2025-03-02 00:44:51,162] [main] testng.allow-missing = false [testng] [2025-03-02 00:44:51,162] [main] user.language = en [testng] [2025-03-02 00:44:51,162] [main] user.country = ${user.country} [testng] [2025-03-02 00:44:51,163] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2025-03-02 00:45:11,299] [main] ---------------------------------------- [testng] [2025-03-02 00:45:11,300] [main] Total files: 259 [testng] [2025-03-02 00:45:11,300] [main] Scan time: 20.136 s (77 ms/file) [testng] [2025-03-02 00:45:11,300] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-02 00:51:35,175] [pool-1-thread-1] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] 00:51:35,175 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:51:35,175 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:51:35,176 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-02_00-51-35.log] [testng] 00:51:35,177 |-INFO in ch.qos.logback.core.sift.SiftProcessor@493e6d11 - End of configuration. [testng] [2025-03-02 00:51:35,365] [pool-1-thread-12] Initializing /data/stefan/yc2_live-03.oib: [testng] 00:51:35,365 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:51:35,365 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:51:35,366 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-02_00-51-35.log] [testng] 00:51:35,367 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4dbe3b09 - End of configuration. [testng] [2025-03-02 00:51:36,233] [pool-1-thread-11] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] 00:51:36,233 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:51:36,233 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:51:36,234 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-02_00-51-36.log] [testng] 00:51:36,234 |-INFO in ch.qos.logback.core.sift.SiftProcessor@361b4519 - End of configuration. [testng] [2025-03-02 00:51:36,371] [pool-1-thread-10] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] 00:51:36,371 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:51:36,371 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:51:36,372 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-02_00-51-36.log] [testng] 00:51:36,372 |-INFO in ch.qos.logback.core.sift.SiftProcessor@686787ad - End of configuration. [testng] [2025-03-02 00:51:36,525] [pool-1-thread-9] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] 00:51:36,525 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:51:36,525 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:51:36,526 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-02_00-51-36.log] [testng] 00:51:36,527 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35e0638d - End of configuration. [testng] [2025-03-02 00:51:36,741] [pool-1-thread-8] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] 00:51:36,741 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:51:36,741 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:51:36,742 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-02_00-51-36.log] [testng] 00:51:36,742 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4fcb720b - End of configuration. [testng] [2025-03-02 00:51:41,272] [pool-1-thread-7] Initializing /data/yasunori/series_1.oib: [testng] 00:51:41,272 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:51:41,272 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:51:41,273 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-02_00-51-41.log] [testng] 00:51:41,273 |-INFO in ch.qos.logback.core.sift.SiftProcessor@168b0460 - End of configuration. [testng] [2025-03-02 00:51:42,024] [pool-1-thread-6] Initializing /data/johannes/step5b.bmp: [testng] 00:51:42,024 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:51:42,024 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:51:42,025 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-02_00-51-42.log] [testng] 00:51:42,025 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6ddc5575 - End of configuration. [testng] [2025-03-02 00:51:42,837] [pool-1-thread-5] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] 00:51:42,837 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:51:42,838 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:51:42,838 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-02_00-51-42.log] [testng] 00:51:42,839 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39d07b87 - End of configuration. [testng] [2025-03-02 00:51:43,913] [pool-1-thread-4] Initializing /data/aryeh/030408 2 1.oib: [testng] 00:51:43,913 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:51:43,913 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:51:43,913 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-02_00-51-43.log] [testng] 00:51:43,914 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4917ba06 - End of configuration. [testng] [2025-03-02 00:51:46,218] [pool-1-thread-3] Initializing /data/glen/singlesimul.oif: [testng] 00:51:46,219 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:51:46,219 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:51:46,220 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-02_00-51-46.log] [testng] 00:51:46,220 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5af2dfdf - End of configuration. [testng] [2025-03-02 00:51:48,216] [pool-1-thread-2] Initializing /data/glen/simulstack.oib: [testng] 00:51:48,216 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:51:48,216 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:51:48,217 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-02_00-51-48.log] [testng] 00:51:48,217 |-INFO in ch.qos.logback.core.sift.SiftProcessor@65af82f8 - End of configuration. [testng] [2025-03-02 00:51:52,663] [pool-1-thread-6] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2025-03-02 00:51:53,194] [pool-1-thread-5] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2025-03-02 00:51:53,843] [pool-1-thread-4] Initializing /data/qa-17748/Image0079.oib: [testng] [2025-03-02 00:51:54,010] [pool-1-thread-1] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2025-03-02 00:51:54,686] [pool-1-thread-2] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2025-03-02 00:51:55,097] [pool-1-thread-7] Initializing /data/yoshihito/XY.oif: [testng] [2025-03-02 00:51:55,271] [pool-1-thread-10] Initializing /data/molly/11OCT6.OIF: [testng] [2025-03-02 00:51:59,761] [pool-1-thread-4] Initializing /data/brian/FLIP.oib: [testng] [2025-03-02 00:52:01,392] [pool-1-thread-12] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2025-03-02 00:52:03,299] [pool-1-thread-5] Initializing /data/molly/11OCT11.OIF: [testng] [2025-03-02 00:52:08,298] [pool-1-thread-6] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] [2025-03-02 00:52:08,847] [pool-1-thread-2] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2025-03-02 00:52:13,690] [pool-1-thread-11] Initializing /data/molly/11OCT5.OIF: [testng] [2025-03-02 00:52:21,125] [pool-1-thread-3] Initializing /data/jae/Image0001.oib: [testng] [2025-03-02 00:52:21,657] [pool-1-thread-9] Initializing /data/glen/notsaturated.oif: [testng] [2025-03-02 00:52:24,092] [pool-1-thread-4] Initializing /data/johannes/step3.bmp: [testng] [2025-03-02 00:52:25,477] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2025-03-02 00:52:27,193] [pool-1-thread-4] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2025-03-02 00:52:28,725] [pool-1-thread-6] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2025-03-02 00:52:55,720] [pool-1-thread-2] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2025-03-02 00:52:56,545] [pool-1-thread-2] Initializing /data/glen/singlesimul.oib: [testng] [2025-03-02 00:52:57,588] [pool-1-thread-3] Initializing /data/simon/used_to_work.oib: [testng] [2025-03-02 00:52:58,704] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] [2025-03-02 00:53:00,108] [pool-1-thread-8] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2025-03-02 00:53:00,391] [pool-1-thread-2] Initializing /data/tom/RGB-1.avi: [testng] [2025-03-02 00:53:02,659] [pool-1-thread-2] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2025-03-02 00:53:03,647] [pool-1-thread-3] Initializing /data/yoshihito/XY.oib: [testng] [2025-03-02 00:53:04,003] [pool-1-thread-8] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2025-03-02 00:53:04,408] [pool-1-thread-7] Initializing /data/glen/Image0002.oif: [testng] [2025-03-02 00:53:08,674] [pool-1-thread-3] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2025-03-02 00:53:10,691] [pool-1-thread-8] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2025-03-02 00:53:16,111] [pool-1-thread-8] Initializing /data/glen/4205basal106072.oif: [testng] [2025-03-02 00:53:20,068] [pool-1-thread-3] Initializing /data/molly/11OCT8.OIF: [testng] [2025-03-02 00:55:25,334] [pool-1-thread-2] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2025-03-02 00:55:33,027] [pool-1-thread-2] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2025-03-02 00:55:39,301] [pool-1-thread-2] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2025-03-02 00:55:43,881] [pool-1-thread-2] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2025-03-02 00:55:48,802] [pool-1-thread-2] Initializing /data/qa-17748/Image0098.oib: [testng] [2025-03-02 00:55:54,381] [pool-1-thread-2] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2025-03-02 00:55:59,911] [pool-1-thread-2] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] [2025-03-02 00:56:49,977] [pool-1-thread-2] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2025-03-02 00:58:59,367] [pool-1-thread-9] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2025-03-02 00:59:04,264] [pool-1-thread-9] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2025-03-02 00:59:09,862] [pool-1-thread-9] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2025-03-02 00:59:15,109] [pool-1-thread-9] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2025-03-02 01:00:12,265] [pool-1-thread-2] Initializing /data/glen/simulstack.oif: [testng] [2025-03-02 01:02:37,284] [pool-1-thread-9] Initializing /data/stefan/cytosol_08b.oif: [testng] [2025-03-02 01:03:53,611] [pool-1-thread-1] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2025-03-02 01:03:57,608] [pool-1-thread-1] Initializing /data/johannes/step4b.bmp: [testng] [2025-03-02 01:03:59,680] [pool-1-thread-1] Initializing /data/glen/singleseqframe.oib: [testng] [2025-03-02 01:04:02,949] [pool-1-thread-1] Initializing /data/marc/V0606L.oib: [testng] [2025-03-02 01:04:27,868] [pool-1-thread-1] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2025-03-02 01:04:45,590] [pool-1-thread-4] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2025-03-02 01:04:56,564] [pool-1-thread-4] Initializing /data/christian/20min.oif: [testng] [2025-03-02 01:05:10,078] [pool-1-thread-4] Initializing /data/brian/CFP-GFP2.oib: [testng] [2025-03-02 01:05:13,967] [pool-1-thread-4] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2025-03-02 01:05:16,965] [pool-1-thread-4] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2025-03-02 01:05:20,322] [pool-1-thread-4] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2025-03-02 01:05:24,149] [pool-1-thread-4] Initializing /data/monica/Image0056.oif: [testng] [2025-03-02 01:05:50,667] [pool-1-thread-4] Initializing /data/johannes/step1.bmp: [testng] [2025-03-02 01:05:52,342] [pool-1-thread-4] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2025-03-02 01:06:07,603] [pool-1-thread-1] Initializing /data/sten/01.oib: [testng] [2025-03-02 01:06:11,458] [pool-1-thread-1] Initializing /data/stefan/cytosol_01a.oif: [testng] [2025-03-02 01:07:07,039] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2025-03-02 01:07:13,004] [pool-1-thread-7] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2025-03-02 01:07:17,005] [pool-1-thread-7] Initializing /data/simon/never_worked.oib: [testng] [2025-03-02 01:07:20,772] [pool-1-thread-7] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2025-03-02 01:07:24,027] [pool-1-thread-7] Initializing /data/glen/Null file/test no change.oif: [testng] [2025-03-02 01:07:44,487] [pool-1-thread-11] Initializing /data/glen/111407.oif: [testng] [2025-03-02 01:08:00,471] [pool-1-thread-12] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] [2025-03-02 01:08:01,288] [pool-1-thread-7] Initializing /data/molly/11OCT10.OIF: [testng] [2025-03-02 01:08:24,256] [pool-1-thread-12] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] [2025-03-02 01:08:27,733] [pool-1-thread-4] Initializing /data/brian/LILY POLLEN.oib: [testng] [2025-03-02 01:08:29,387] [pool-1-thread-12] Initializing /data/johannes/step2.bmp: [testng] [2025-03-02 01:08:32,298] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2025-03-02 01:08:36,536] [pool-1-thread-4] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] [2025-03-02 01:08:41,666] [pool-1-thread-12] Initializing /data/glen/singleseqframe.oif: [testng] [2025-03-02 01:09:23,277] [pool-1-thread-12] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2025-03-02 01:09:28,051] [pool-1-thread-12] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2025-03-02 01:09:30,156] [pool-1-thread-10] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2025-03-02 01:09:31,937] [pool-1-thread-12] Initializing /data/glen/seqlinestack.oif: [testng] [2025-03-02 01:09:41,300] [pool-1-thread-10] Initializing /data/david/Image0016.oif: [testng] [2025-03-02 01:10:32,017] [pool-1-thread-5] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2025-03-02 01:10:52,108] [pool-1-thread-10] Initializing /data/glen/singleseqline.oib: [testng] [2025-03-02 01:10:56,136] [pool-1-thread-10] Initializing /data/stefan/cytosol_03e.oib: [testng] [2025-03-02 01:11:05,309] [pool-1-thread-10] Initializing /data/brian/lambda02nm.oib: [testng] [2025-03-02 01:11:06,116] [pool-1-thread-5] Initializing /data/johannes/step4.bmp: [testng] [2025-03-02 01:11:08,760] [pool-1-thread-5] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2025-03-02 01:11:10,877] [pool-1-thread-2] Initializing /data/karl/Image0009.oib: [testng] [2025-03-02 01:11:12,759] [pool-1-thread-10] Initializing /data/allan/62909#1.oib: [testng] [2025-03-02 01:11:15,077] [pool-1-thread-2] Initializing /data/glen/Null file/test change.oif: [testng] [2025-03-02 01:11:17,079] [pool-1-thread-10] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2025-03-02 01:11:28,313] [pool-1-thread-3] Initializing /data/francesco/fGfp.c15.oib: [testng] [2025-03-02 01:11:33,805] [pool-1-thread-3] Initializing /data/molly/11OCT4.OIF: [testng] [2025-03-02 01:12:03,857] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2025-03-02 01:12:06,915] [pool-1-thread-2] Initializing /data/molly/11OCT7.OIF: [testng] [2025-03-02 01:12:22,105] [pool-1-thread-10] Initializing /data/brian/PA-GFP-3.oib: [testng] [2025-03-02 01:12:30,279] [pool-1-thread-10] Initializing /data/brian/Kaede15.oib: [testng] [2025-03-02 01:12:37,925] [pool-1-thread-10] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2025-03-02 01:13:28,891] [pool-1-thread-8] Initializing /data/pedro/plv-test.oib: [testng] [2025-03-02 01:13:32,927] [pool-1-thread-8] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2025-03-02 01:13:36,817] [pool-1-thread-8] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2025-03-02 01:13:38,144] [pool-1-thread-8] Initializing /data/molly/11OCT3.OIF: [testng] [2025-03-02 01:17:44,706] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2025-03-02 01:17:52,737] [pool-1-thread-4] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2025-03-02 01:18:38,185] [pool-1-thread-4] Initializing /data/chris/missegragation-15.oib: [testng] [2025-03-02 01:18:45,063] [pool-1-thread-4] Initializing /data/glen/notsaturated.oib: [testng] [2025-03-02 01:18:52,716] [pool-1-thread-4] Initializing /data/marc/V0606J.oib: [testng] [2025-03-02 01:19:13,054] [pool-1-thread-4] Initializing /data/glen/seqlinestack.oib: [testng] [2025-03-02 01:19:22,725] [pool-1-thread-4] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2025-03-02 01:19:31,012] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2025-03-02 01:19:41,781] [pool-1-thread-4] Initializing /data/molly/11OCT9.OIF: [testng] [2025-03-02 01:22:02,526] [pool-1-thread-10] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] [2025-03-02 01:22:17,342] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2025-03-02 01:22:25,047] [pool-1-thread-11] Initializing /data/michael/CELL3.oib: [testng] [2025-03-02 01:22:29,972] [pool-1-thread-11] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] [2025-03-02 01:22:35,983] [pool-1-thread-11] Initializing /data/brian/Lambda10nm.oib: [testng] [2025-03-02 01:22:39,879] [pool-1-thread-11] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2025-03-02 01:22:45,298] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2025-03-02 01:22:51,537] [pool-1-thread-11] Initializing /data/aryeh/1h.oib: [testng] [2025-03-02 01:23:00,649] [pool-1-thread-11] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2025-03-02 01:23:04,991] [pool-1-thread-11] Initializing /data/tom/zseries-test.oib: [testng] [2025-03-02 01:23:13,371] [pool-1-thread-11] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2025-03-02 01:23:18,811] [pool-1-thread-5] Initializing /data/glen/singleseqline.oif: [testng] [2025-03-02 01:23:20,640] [pool-1-thread-11] Initializing /data/molly/11OCT2.OIF: [testng] [2025-03-02 01:24:37,969] [pool-1-thread-5] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2025-03-02 01:24:54,668] [pool-1-thread-9] Initializing /data/aryeh/control_test.oib: [testng] [2025-03-02 01:24:59,887] [pool-1-thread-5] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] [2025-03-02 01:25:06,792] [pool-1-thread-5] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2025-03-02 01:25:12,898] [pool-1-thread-5] Initializing /data/david/Image0016.oib: [testng] [2025-03-02 01:25:19,568] [pool-1-thread-5] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2025-03-02 01:25:28,860] [pool-1-thread-9] Initializing /data/kay/IM2pg.oib: [testng] 02:27:51,753 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:27:51,753 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:27:51,754 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-02_02-27-51.log] [testng] 02:27:51,754 |-INFO in ch.qos.logback.core.sift.SiftProcessor@786fa6f2 - End of configuration. [testng] 02:36:05,252 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:36:05,252 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:36:05,254 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-02_02-36-05.log] [testng] 02:36:05,254 |-INFO in ch.qos.logback.core.sift.SiftProcessor@40190f7f - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 111 minutes 19 seconds Finished: SUCCESS