![[Jenkins]](/jenkins/static/316c2b55/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 364 originally caused by: Started by upstream project "Trigger" build number 390 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins3989834959517871203.sh + '[' olympus-oir = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_57974_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 00:21:36,316 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 00:21:36,318 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - No custom configurators were discovered as a service. [testng] 00:21:36,318 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:21:36,319 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:21:36,320 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:21:36,321 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:21:36,321 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:21:36,321 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:21:36,322 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:21:36,322 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:21:36,323 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:21:36,323 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:21:36,499 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:21:36,499 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:21:36,522 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:21:36,522 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:21:36,528 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:21:36,528 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:21:36,528 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:21:36,529 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:21:36,529 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@65c7a252 - End of configuration. [testng] 00:21:36,529 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@38cee291 - Registering current configuration as safe fallback point [testng] 00:21:36,529 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 207 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-04 00:21:36,538] [main] java.version = 11.0.16 [testng] 00:21:36,541 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:21:36,541 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:36,584 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-04_00-21-36.log] [testng] 00:21:36,585 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13d73f29 - End of configuration. [testng] [2025-03-04 00:21:36,587] [main] testng.directory = /data [testng] [2025-03-04 00:21:36,587] [main] testng.configDirectory = /config [testng] [2025-03-04 00:21:36,597] [main] testng.multiplier = 1.0 [testng] [2025-03-04 00:21:36,599] [main] testng.in-memory = false [testng] [2025-03-04 00:21:36,599] [main] testng.allow-missing = false [testng] [2025-03-04 00:21:36,599] [main] user.language = en [testng] [2025-03-04 00:21:36,599] [main] user.country = ${user.country} [testng] [2025-03-04 00:21:36,599] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2025-03-04 00:22:05,251] [main] ---------------------------------------- [testng] [2025-03-04 00:22:05,251] [main] Total files: 320 [testng] [2025-03-04 00:22:05,251] [main] Scan time: 28.651 s (89 ms/file) [testng] [2025-03-04 00:22:05,251] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 196 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-04 00:32:57,195] [pool-1-thread-1] Initializing /data/public/gh-4205/zenodo-13680725/Stitch_A01_G001.oir: [testng] 00:32:57,196 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:32:57,196 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:32:57,199 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-04_00-32-57.log] [testng] 00:32:57,199 |-INFO in ch.qos.logback.core.sift.SiftProcessor@34cf19ac - End of configuration. [testng] [2025-03-04 00:32:57,659] [pool-1-thread-12] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: [testng] 00:32:57,660 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:32:57,660 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:32:57,661 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-04_00-32-57.log] [testng] 00:32:57,661 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21a02e4f - End of configuration. [testng] [2025-03-04 00:32:58,090] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif: [testng] 00:32:58,090 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:32:58,090 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:32:58,091 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-04_00-32-58.log] [testng] 00:32:58,091 |-INFO in ch.qos.logback.core.sift.SiftProcessor@32833a16 - End of configuration. [testng] [2025-03-04 00:32:58,494] [pool-1-thread-10] Initializing /data/public/imagesc-105684/1202-interval_30sec_sequence_frame_z stack.oir: [testng] 00:32:58,495 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:32:58,495 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:32:58,495 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-04_00-32-58.log] [testng] 00:32:58,496 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2e274fdb - End of configuration. [testng] [2025-03-04 00:32:58,967] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: [testng] 00:32:58,967 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:32:58,967 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:32:58,968 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-04_00-32-58.log] [testng] 00:32:58,968 |-INFO in ch.qos.logback.core.sift.SiftProcessor@19e1ac6e - End of configuration. [testng] [2025-03-04 00:32:59,248] [pool-1-thread-8] Initializing /data/qa-16881/P10-50 D2_0019.oir: [testng] 00:32:59,249 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:32:59,249 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:32:59,249 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-04_00-32-59.log] [testng] 00:32:59,249 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d6d28ab - End of configuration. [testng] [2025-03-04 00:32:59,551] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/Clipboard.tif: [testng] 00:32:59,551 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:32:59,551 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:32:59,552 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-04_00-32-59.log] [testng] 00:32:59,552 |-INFO in ch.qos.logback.core.sift.SiftProcessor@38290595 - End of configuration. [testng] [2025-03-04 00:32:59,865] [pool-1-thread-6] Initializing /data/qa-16881/P10D1 20150729.oir: [testng] 00:32:59,865 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:32:59,865 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:32:59,866 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-04_00-32-59.log] [testng] 00:32:59,866 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13ce71b4 - End of configuration. [testng] [2025-03-04 00:33:00,180] [pool-1-thread-5] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.vsi: [testng] 00:33:00,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:33:00,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:00,181 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-04_00-33-00.log] [testng] 00:33:00,182 |-INFO in ch.qos.logback.core.sift.SiftProcessor@61a21a78 - End of configuration. [testng] [2025-03-04 00:33:00,324] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: [testng] 00:33:00,324 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:33:00,324 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:00,324 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-04_00-33-00.log] [testng] 00:33:00,325 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b61f46f - End of configuration. [testng] [2025-03-04 00:33:00,639] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: [testng] 00:33:00,640 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:33:00,640 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:00,640 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-04_00-33-00.log] [testng] 00:33:00,641 |-INFO in ch.qos.logback.core.sift.SiftProcessor@60b52390 - End of configuration. [testng] [2025-03-04 00:33:00,914] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir: [testng] 00:33:00,914 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:33:00,914 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:00,915 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-04_00-33-00.log] [testng] 00:33:00,915 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18907f43 - End of configuration. [testng] [2025-03-04 00:33:04,837] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: [testng] [2025-03-04 00:33:05,640] [pool-1-thread-5] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: [testng] [2025-03-04 00:33:06,213] [pool-1-thread-2] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif: [testng] [2025-03-04 00:33:06,912] [pool-1-thread-3] Initializing /data/olympus/Clipboard-XYZt.tif: [testng] [2025-03-04 00:33:07,218] [pool-1-thread-11] Initializing /data/qa-16871/XY_0003.ome.tif: [testng] [2025-03-04 00:33:07,401] [pool-1-thread-4] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif: [testng] [2025-03-04 00:33:07,627] [pool-1-thread-7] Initializing /data/qa-16881/P10D1 20150729.ome.tif: [testng] [2025-03-04 00:33:07,812] [pool-1-thread-12] Initializing /data/olympus/spectral_scan_XYL.oir: [testng] [2025-03-04 00:33:08,279] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif: [testng] [2025-03-04 00:33:08,498] [pool-1-thread-8] Initializing /data/qa-17335/Clipboard-OSR-Z.tif: [testng] [2025-03-04 00:33:10,361] [pool-1-thread-9] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif: [testng] [2025-03-04 00:33:12,000] [pool-1-thread-1] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif: [testng] [2025-03-04 00:33:12,422] [pool-1-thread-10] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: [testng] [2025-03-04 00:33:16,737] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir: [testng] [2025-03-04 00:33:17,075] [pool-1-thread-11] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif: [testng] [2025-03-04 00:33:17,691] [pool-1-thread-2] Initializing /data/olympus/Stitched_XYZ.ome.tif: [testng] [2025-03-04 00:33:18,275] [pool-1-thread-7] Initializing /data/qa-17270/Clipboard-stack1.tif: [testng] [2025-03-04 00:33:18,901] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: [testng] [2025-03-04 00:33:19,323] [pool-1-thread-3] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: [testng] [2025-03-04 00:33:19,687] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: [testng] [2025-03-04 00:33:20,271] [pool-1-thread-8] Initializing /data/olympus/Stitched_XYZ.oir: [testng] [2025-03-04 00:33:22,769] [pool-1-thread-9] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir: [testng] [2025-03-04 00:33:25,103] [pool-1-thread-5] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif: [testng] [2025-03-04 00:33:25,787] [pool-1-thread-1] Initializing /data/public/gh-4205/zenodo-13680725/matl.omp2info: [testng] [2025-03-04 00:33:36,430] [pool-1-thread-2] Initializing /data/qa-17409/Stitch_A01_G001.oir: [testng] [2025-03-04 00:33:36,970] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: [testng] [2025-03-04 00:33:37,345] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: [testng] [2025-03-04 00:33:37,706] [pool-1-thread-11] Initializing /data/qa-17335/OSR-Z.oir: [testng] [2025-03-04 00:33:37,937] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif: [testng] [2025-03-04 00:33:38,142] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: [testng] [2025-03-04 00:33:38,902] [pool-1-thread-8] Initializing /data/olympus/Stitched_XYZ.vsi: [testng] [2025-03-04 00:33:40,321] [pool-1-thread-9] Initializing /data/qa-17293/Clipboard.tif: [testng] [2025-03-04 00:33:41,497] [pool-1-thread-3] Initializing /data/olympus/40X_4CH_XY.ome.tif: [testng] [2025-03-04 00:33:41,877] [pool-1-thread-7] Initializing /data/olympus/40X_4CH_XY.oir: [testng] [2025-03-04 00:33:42,209] [pool-1-thread-5] Initializing /data/qa-17331/60x zstack RS.oir: [testng] [2025-03-04 00:33:42,628] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif: [testng] [2025-03-04 00:33:43,126] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif: [testng] [2025-03-04 00:33:43,595] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif: [testng] [2025-03-04 00:33:44,122] [pool-1-thread-8] Initializing /data/qa-16881/P10D1 20150729_0019.oir: [testng] [2025-03-04 00:33:46,466] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: [testng] [2025-03-04 00:33:46,837] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: [testng] [2025-03-04 00:33:48,926] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif: [testng] [2025-03-04 00:33:49,961] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: [testng] [2025-03-04 00:33:50,519] [pool-1-thread-3] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir: [testng] [2025-03-04 00:33:50,916] [pool-1-thread-6] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif: [testng] [2025-03-04 00:33:51,451] [pool-1-thread-11] Initializing /data/qa-17270/Clipboard-alexa488.tif: [testng] [2025-03-04 00:33:52,558] [pool-1-thread-8] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif: [testng] [2025-03-04 00:33:55,619] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif: [testng] [2025-03-04 00:33:56,106] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif: [testng] [2025-03-04 00:33:56,874] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: [testng] [2025-03-04 00:33:58,708] [pool-1-thread-12] Initializing /data/qa-16881/P10-50 D2.ome.tif: [testng] [2025-03-04 00:33:59,404] [pool-1-thread-6] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_22Lambda-420-630-w10nm-s10nm.oir: [testng] [2025-03-04 00:33:59,747] [pool-1-thread-5] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: [testng] [2025-03-04 00:34:00,693] [pool-1-thread-11] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: [testng] [2025-03-04 00:34:01,314] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: [testng] [2025-03-04 00:34:01,717] [pool-1-thread-3] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: [testng] [2025-03-04 00:34:03,618] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif: [testng] [2025-03-04 00:34:04,478] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif: [testng] [2025-03-04 00:34:05,491] [pool-1-thread-9] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: [testng] [2025-03-04 00:34:06,307] [pool-1-thread-2] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_4T_5Lambda-420-630-w10nm-s50nm.oir: [testng] [2025-03-04 00:34:07,689] [pool-1-thread-8] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir: [testng] [2025-03-04 00:34:08,008] [pool-1-thread-5] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: [testng] [2025-03-04 00:34:09,482] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif: [testng] [2025-03-04 00:34:10,728] [pool-1-thread-4] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: [testng] [2025-03-04 00:34:11,419] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: [testng] [2025-03-04 00:34:12,598] [pool-1-thread-9] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir: [testng] [2025-03-04 00:35:12,250] [pool-1-thread-8] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif: [testng] [2025-03-04 00:35:14,566] [pool-1-thread-3] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir: [testng] [2025-03-04 00:35:15,718] [pool-1-thread-12] Initializing /data/olympus/XYZt.oir: [testng] [2025-03-04 00:35:18,322] [pool-1-thread-4] Initializing /data/public/etienne/amy slice z stack_0001.oir: [testng] [2025-03-04 00:35:20,126] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: [testng] [2025-03-04 00:35:21,351] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: [testng] [2025-03-04 00:35:21,986] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir: [testng] [2025-03-04 00:35:24,673] [pool-1-thread-11] Initializing /data/qa-17335/1.oir: [testng] [2025-03-04 00:35:25,614] [pool-1-thread-2] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_4Z_5Lambda-420-630-w10nm-s50nm.oir: [testng] [2025-03-04 00:35:29,671] [pool-1-thread-4] Initializing /data/olympus/calcium sparks_XYt.vsi: [testng] [2025-03-04 00:35:32,092] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir: [testng] [2025-03-04 00:35:36,267] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir: [testng] [2025-03-04 00:35:36,901] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: [testng] [2025-03-04 00:35:38,560] [pool-1-thread-12] Initializing /data/public/etienne/coupe shg stack_0001.oir: [testng] [2025-03-04 00:35:42,126] [pool-1-thread-5] Initializing /data/qa-17270/alexa488.ome.tif: [testng] [2025-03-04 00:35:46,195] [pool-1-thread-11] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir: [testng] [2025-03-04 00:35:47,737] [pool-1-thread-4] Initializing /data/olympus/calcium sparks.jpg: [testng] [2025-03-04 00:35:48,634] [pool-1-thread-12] Initializing /data/public/etienne/Clipboard-venus stack.tif: [testng] [2025-03-04 00:35:50,587] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif: [testng] [2025-03-04 00:35:52,655] [pool-1-thread-5] Initializing /data/qa-17409/Clipboard.tif: [testng] [2025-03-04 00:35:54,277] [pool-1-thread-2] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: [testng] [2025-03-04 00:35:57,162] [pool-1-thread-4] Initializing /data/qa-16881/P10D1 20150729_0024.oir: [testng] [2025-03-04 00:35:59,818] [pool-1-thread-11] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: [testng] [2025-03-04 00:36:01,886] [pool-1-thread-12] Initializing /data/qa-17270/image1.oir: [testng] [2025-03-04 00:36:02,479] [pool-1-thread-7] Initializing /data/qa-17922/example_multipart.oir: [testng] [2025-03-04 00:36:27,443] [pool-1-thread-5] Initializing /data/public/imagesc-105684/1202-interval_10sec_sequence_frame.oir: [testng] [2025-03-04 00:36:28,652] [pool-1-thread-2] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: [testng] [2025-03-04 00:36:31,300] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif: [testng] [2025-03-04 00:36:33,413] [pool-1-thread-8] Initializing /data/qa-17335/1.ome.tif: [testng] [2025-03-04 00:36:37,973] [pool-1-thread-4] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif: [testng] [2025-03-04 00:36:39,579] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif: [testng] [2025-03-04 00:36:43,269] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir: [testng] [2025-03-04 00:36:44,668] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir: [testng] [2025-03-04 00:36:45,467] [pool-1-thread-11] Initializing /data/olympus/calcium sparks_XYt.oir: [testng] [2025-03-04 00:36:48,377] [pool-1-thread-5] Initializing /data/olympus/2017-04-20/Clipboard.tif: [testng] [2025-03-04 00:36:49,512] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif: [testng] [2025-03-04 00:36:50,673] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif: [testng] [2025-03-04 00:36:52,490] [pool-1-thread-2] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir: [testng] [2025-03-04 00:36:53,961] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir: [testng] [2025-03-04 00:36:56,143] [pool-1-thread-8] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif: [testng] [2025-03-04 00:36:59,119] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2_0006.oir: [testng] [2025-03-04 00:37:00,303] [pool-1-thread-5] Initializing /data/olympus/XYZt.vsi: [testng] [2025-03-04 00:37:00,681] [pool-1-thread-6] Initializing /data/public/imagesc-105684/1202-interval_freeRun_sequence_frame.oir: [testng] [2025-03-04 00:37:01,280] [pool-1-thread-4] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: [testng] [2025-03-04 00:37:02,398] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif: [testng] [2025-03-04 00:37:04,619] [pool-1-thread-3] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif: [testng] [2025-03-04 00:37:07,729] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/zebra shg.oir: [testng] [2025-03-04 00:37:10,478] [pool-1-thread-8] Initializing /data/qa-16871/Clipboard.tif: [testng] [2025-03-04 00:37:11,962] [pool-1-thread-11] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: [testng] [2025-03-04 00:37:13,034] [pool-1-thread-3] Initializing /data/qa-17270/alexa488.oir: [testng] [2025-03-04 00:37:14,126] [pool-1-thread-2] Initializing /data/qa-17335/stimulation_0001_LSM.oir: [testng] [2025-03-04 00:37:14,932] [pool-1-thread-4] Initializing /data/qa-17917/f10010.oir: [testng] [2025-03-04 00:37:49,276] [pool-1-thread-11] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif: [testng] [2025-03-04 00:37:49,816] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi: [testng] [2025-03-04 00:37:50,230] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: [testng] [2025-03-04 00:37:54,096] [pool-1-thread-2] Initializing /data/cudmore/20190401__0005.oir: [testng] [2025-03-04 00:38:00,489] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif: [testng] [2025-03-04 00:38:01,350] [pool-1-thread-11] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: [testng] [2025-03-04 00:38:02,912] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: [testng] [2025-03-04 00:38:05,406] [pool-1-thread-8] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: [testng] [2025-03-04 00:38:10,577] [pool-1-thread-11] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: [testng] [2025-03-04 00:38:17,489] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir: [testng] [2025-03-04 00:38:23,251] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir: [testng] [2025-03-04 00:38:24,317] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: [testng] [2025-03-04 00:38:25,654] [pool-1-thread-6] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir: [testng] [2025-03-04 00:38:33,125] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: [testng] [2025-03-04 00:38:36,243] [pool-1-thread-11] Initializing /data/olympus/calcium sparks_XYt.ome.tif: [testng] [2025-03-04 00:38:38,042] [pool-1-thread-1] Initializing /data/qa-16871/XY_0003.oir: [testng] [2025-03-04 00:38:38,930] [pool-1-thread-12] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: [testng] [2025-03-04 00:38:39,897] [pool-1-thread-12] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info: [testng] [2025-03-04 00:38:43,891] [pool-1-thread-3] Initializing /data/olympus/XYZt.ome.tif: [testng] [2025-03-04 00:38:47,912] [pool-1-thread-11] Initializing /data/qa-17270/Clipboard-image1.tif: [testng] [2025-03-04 00:38:49,691] [pool-1-thread-2] Initializing /data/olympus/40X_4CH_XY.vsi: [testng] [2025-03-04 00:38:54,185] [pool-1-thread-1] Initializing /data/qa-17919/f10187.oir: [testng] [2025-03-04 00:39:14,626] [pool-1-thread-3] Initializing /data/public/etienne/venus stack.ome.tif: [testng] [2025-03-04 00:39:16,588] [pool-1-thread-2] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info: [testng] [2025-03-04 00:39:21,327] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir: [testng] [2025-03-04 00:39:25,270] [pool-1-thread-8] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif: [testng] [2025-03-04 00:39:26,148] [pool-1-thread-3] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif: [testng] [2025-03-04 00:39:29,874] [pool-1-thread-11] Initializing /data/qa-17331/Clipboard.tif: [testng] [2025-03-04 00:39:32,993] [pool-1-thread-8] Initializing /data/qa-21508/Stitch_A01_G008.oir: [testng] [2025-03-04 00:39:35,075] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: [testng] [2025-03-04 00:39:38,167] [pool-1-thread-11] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: [testng] [2025-03-04 00:39:40,527] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif: [testng] [2025-03-04 00:39:45,137] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: [testng] [2025-03-04 00:39:49,610] [pool-1-thread-3] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif: [testng] [2025-03-04 00:39:52,008] [pool-1-thread-11] Initializing /data/qa-17335/OSR-Z.ome.tif: [testng] [2025-03-04 00:39:55,187] [pool-1-thread-3] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir: [testng] [2025-03-04 00:39:58,546] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: [testng] [2025-03-04 00:40:03,739] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2.oir: [testng] [2025-03-04 00:40:05,240] [pool-1-thread-8] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: [testng] [2025-03-04 00:40:10,502] [pool-1-thread-8] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif: [testng] [2025-03-04 00:40:11,067] [pool-1-thread-11] Initializing /data/qa-17331/60x zstack RS.ome.tif: [testng] [2025-03-04 00:40:15,628] [pool-1-thread-8] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: [testng] [2025-03-04 00:40:16,221] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: [testng] [2025-03-04 00:40:23,509] [pool-1-thread-11] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: [testng] [2025-03-04 00:40:30,421] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif: [testng] [2025-03-04 00:40:32,139] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: [testng] [2025-03-04 00:40:37,859] [pool-1-thread-6] Initializing /data/olympus/spectral_scan_XYL.ome.tif: [testng] [2025-03-04 00:40:39,084] [pool-1-thread-11] Initializing /data/qa-17270/stack1.ome.tif: [testng] [2025-03-04 00:40:42,598] [pool-1-thread-6] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif: [testng] [2025-03-04 00:40:44,380] [pool-1-thread-11] Initializing /data/public/imagesc-105684/1202-interval_30sec_sequence_frame.oir: [testng] [2025-03-04 00:40:49,479] [pool-1-thread-6] Initializing /data/qa-17270/image1.ome.tif: [testng] [2025-03-04 00:40:55,152] [pool-1-thread-6] Initializing /data/public/gh-4205/zenodo-12773657/DAPI-mCherry_3T_4Z_5Lambda-420-630-w10nm-s50nm.oir: [testng] [2025-03-04 00:40:57,561] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif: [testng] [2025-03-04 00:40:58,184] [pool-1-thread-11] Initializing /data/qa-17270/stack1.oir: [testng] [2025-03-04 00:41:00,697] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: [testng] [2025-03-04 00:41:05,146] [pool-1-thread-5] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: [testng] [2025-03-04 00:41:05,699] [pool-1-thread-8] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: [testng] [2025-03-04 00:41:07,860] [pool-1-thread-7] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info: [testng] [2025-03-04 00:41:12,931] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: [testng] [2025-03-04 00:41:13,604] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif: [testng] [2025-03-04 00:41:14,662] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: [testng] [2025-03-04 00:41:16,171] [pool-1-thread-8] Initializing /data/public/etienne/venus stack.oir: [testng] [2025-03-04 00:41:19,302] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif: [testng] [2025-03-04 00:41:22,203] [pool-1-thread-5] Initializing /data/qa-17335/Clipboard-1.tif: [testng] [2025-03-04 00:41:23,409] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: [testng] [2025-03-04 00:41:23,900] [pool-1-thread-3] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 10388, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 53 minutes 16 seconds Finished: SUCCESS