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Started by upstream project "BIOFORMATS-test-repo" build number 365 originally caused by: Started by upstream project "Trigger" build number 391 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3 [BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins1357519144776819259.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 3 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_58130_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 00:20:52,053 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 00:20:52,054 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - No custom configurators were discovered as a service. [testng] 00:20:52,054 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:20:52,055 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:20:52,055 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:20:52,056 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:20:52,056 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:20:52,056 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:20:52,056 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:20:52,057 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:20:52,057 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:20:52,057 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:20:52,208 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:20:52,208 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:20:52,228 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:20:52,228 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:20:52,233 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:20:52,233 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:20:52,233 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:20:52,233 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:20:52,233 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@3f6f6701 - End of configuration. [testng] 00:20:52,234 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@4f80542f - Registering current configuration as safe fallback point [testng] 00:20:52,234 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 178 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-05 00:20:52,242] [main] java.version = 17.0.2 [testng] 00:20:52,245 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:20:52,245 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:20:52,283 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-05_00-20-52.log] [testng] 00:20:52,285 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14bdbc74 - End of configuration. [testng] [2025-03-05 00:20:52,287] [main] testng.directory = /data [testng] [2025-03-05 00:20:52,287] [main] testng.configDirectory = /config [testng] [2025-03-05 00:20:52,295] [main] testng.multiplier = 1.0 [testng] [2025-03-05 00:20:52,296] [main] testng.in-memory = false [testng] [2025-03-05 00:20:52,296] [main] testng.allow-missing = false [testng] [2025-03-05 00:20:52,296] [main] user.language = en [testng] [2025-03-05 00:20:52,296] [main] user.country = ${user.country} [testng] [2025-03-05 00:20:52,296] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2025-03-05 00:20:58,437] [main] ---------------------------------------- [testng] [2025-03-05 00:20:58,437] [main] Total files: 103 [testng] [2025-03-05 00:20:58,437] [main] Scan time: 6.141 s (59 ms/file) [testng] [2025-03-05 00:20:58,437] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-05 00:21:13,800] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] 00:21:13,801 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:21:13,801 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:13,802 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-05_00-21-13.log] [testng] 00:21:13,802 |-INFO in ch.qos.logback.core.sift.SiftProcessor@61a0f108 - End of configuration. [testng] [2025-03-05 00:21:13,867] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] 00:21:13,868 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:21:13,868 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:13,869 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-05_00-21-13.log] [testng] 00:21:13,869 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1af81b55 - End of configuration. [testng] [2025-03-05 00:21:13,945] [pool-1-thread-11] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] 00:21:13,945 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:21:13,945 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:13,946 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-05_00-21-13.log] [testng] 00:21:13,947 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5d06f91a - End of configuration. [testng] [2025-03-05 00:21:14,358] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] 00:21:14,358 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:21:14,358 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:14,358 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-05_00-21-14.log] [testng] 00:21:14,359 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a273322 - End of configuration. [testng] [2025-03-05 00:21:14,432] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] 00:21:14,432 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:21:14,432 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:14,433 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-05_00-21-14.log] [testng] 00:21:14,433 |-INFO in ch.qos.logback.core.sift.SiftProcessor@372fb45b - End of configuration. [testng] [2025-03-05 00:21:14,499] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] 00:21:14,499 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:21:14,499 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:14,500 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-05_00-21-14.log] [testng] 00:21:14,500 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e16f3af - End of configuration. [testng] [2025-03-05 00:21:14,596] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] 00:21:14,596 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:21:14,596 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:14,597 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-05_00-21-14.log] [testng] 00:21:14,597 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51053046 - End of configuration. [testng] [2025-03-05 00:21:14,722] [pool-1-thread-6] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] 00:21:14,722 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:21:14,722 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:14,723 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-05_00-21-14.log] [testng] 00:21:14,724 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f2cb98 - End of configuration. [testng] [2025-03-05 00:21:15,493] [pool-1-thread-5] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] 00:21:15,493 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:21:15,494 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:15,494 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-05_00-21-15.log] [testng] 00:21:15,494 |-INFO in ch.qos.logback.core.sift.SiftProcessor@77c0b2f1 - End of configuration. [testng] [2025-03-05 00:21:15,537] [pool-1-thread-4] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] 00:21:15,537 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:21:15,537 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:15,537 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-05_00-21-15.log] [testng] 00:21:15,538 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1e8e3637 - End of configuration. [testng] [2025-03-05 00:21:15,889] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] 00:21:15,889 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:21:15,890 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:15,890 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-05_00-21-15.log] [testng] 00:21:15,890 |-INFO in ch.qos.logback.core.sift.SiftProcessor@129520eb - End of configuration. [testng] [2025-03-05 00:21:15,980] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] 00:21:15,980 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:21:15,980 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:15,982 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-05_00-21-15.log] [testng] 00:21:15,982 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39200458 - End of configuration. [testng] [2025-03-05 00:21:18,593] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] [2025-03-05 00:21:18,661] [pool-1-thread-12] Initializing /data/jay/ViewDMtest.dm3: [testng] [2025-03-05 00:21:18,900] [pool-1-thread-7] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] [2025-03-05 00:21:18,995] [pool-1-thread-2] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2025-03-05 00:21:19,419] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2025-03-05 00:21:19,473] [pool-1-thread-9] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2025-03-05 00:21:19,823] [pool-1-thread-1] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2025-03-05 00:21:20,148] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2025-03-05 00:21:21,071] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2025-03-05 00:21:21,818] [pool-1-thread-1] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2025-03-05 00:21:21,954] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e4.tif: [testng] [2025-03-05 00:21:22,469] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2025-03-05 00:21:23,128] [pool-1-thread-6] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2025-03-05 00:21:23,762] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2025-03-05 00:21:23,937] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2025-03-05 00:21:24,121] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2025-03-05 00:21:24,407] [pool-1-thread-2] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] [2025-03-05 00:21:25,036] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] [2025-03-05 00:21:25,230] [pool-1-thread-5] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2025-03-05 00:21:26,257] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2025-03-05 00:21:26,581] [pool-1-thread-9] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2025-03-05 00:21:26,704] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2025-03-05 00:21:26,798] [pool-1-thread-11] Initializing /data/jay/recAmaghi.dm3: [testng] [2025-03-05 00:21:28,309] [pool-1-thread-6] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] [2025-03-05 00:21:29,152] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2025-03-05 00:21:29,585] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2025-03-05 00:21:31,163] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] [2025-03-05 00:21:31,275] [pool-1-thread-9] Initializing /data/jay/dnasample.tif: [testng] [2025-03-05 00:21:31,692] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2025-03-05 00:21:32,149] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2025-03-05 00:21:33,624] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2025-03-05 00:21:33,822] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2025-03-05 00:21:34,346] [pool-1-thread-10] Initializing /data/jay/Carbon.34.dm3: [testng] [2025-03-05 00:21:34,763] [pool-1-thread-5] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2025-03-05 00:21:35,160] [pool-1-thread-8] Initializing /data/ofra/lowloss.dm3: [testng] [2025-03-05 00:21:35,791] [pool-1-thread-3] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2025-03-05 00:21:36,033] [pool-1-thread-8] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2025-03-05 00:21:38,024] [pool-1-thread-9] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2025-03-05 00:21:38,724] [pool-1-thread-5] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2025-03-05 00:21:39,236] [pool-1-thread-8] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] [2025-03-05 00:21:39,821] [pool-1-thread-10] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2025-03-05 00:21:39,934] [pool-1-thread-4] Initializing /data/melissa/annotation-test.dm3: [testng] [2025-03-05 00:21:40,174] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2025-03-05 00:21:40,514] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2025-03-05 00:21:40,840] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2025-03-05 00:21:40,926] [pool-1-thread-6] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2025-03-05 00:21:41,436] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2025-03-05 00:21:41,738] [pool-1-thread-1] Initializing /data/jay/dnasample1.dm3: [testng] [2025-03-05 00:21:42,257] [pool-1-thread-9] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2025-03-05 00:21:43,730] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2025-03-05 00:21:43,790] [pool-1-thread-2] Initializing /data/jay/DMtest2.dm3: [testng] [2025-03-05 00:21:43,855] [pool-1-thread-8] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2025-03-05 00:21:43,947] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2025-03-05 00:21:44,434] [pool-1-thread-10] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2025-03-05 00:21:44,624] [pool-1-thread-12] Initializing /data/jay/DMtest.dm3: [testng] [2025-03-05 00:21:44,976] [pool-1-thread-8] Initializing /data/qa-7642/8.dm4: [testng] [2025-03-05 00:21:45,327] [pool-1-thread-6] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] [2025-03-05 00:21:45,659] [pool-1-thread-10] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2025-03-05 00:21:45,864] [pool-1-thread-3] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2025-03-05 00:21:45,954] [pool-1-thread-5] Initializing /data/samples/test-tiles.dm3: [testng] [2025-03-05 00:21:46,082] [pool-1-thread-4] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2025-03-05 00:21:46,159] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2025-03-05 00:21:46,779] [pool-1-thread-11] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] [2025-03-05 00:21:47,009] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2025-03-05 00:21:47,092] [pool-1-thread-8] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2025-03-05 00:21:47,171] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2025-03-05 00:21:47,217] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2025-03-05 00:21:47,574] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2025-03-05 00:21:48,042] [pool-1-thread-2] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2025-03-05 00:21:48,196] [pool-1-thread-7] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2025-03-05 00:21:48,823] [pool-1-thread-12] Initializing /data/jay/smallerfile.dm3: [testng] [2025-03-05 00:21:49,057] [pool-1-thread-8] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2025-03-05 00:21:49,461] [pool-1-thread-9] Initializing /data/melissa/annotation-test.tif: [testng] [2025-03-05 00:21:50,006] [pool-1-thread-3] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] [2025-03-05 00:21:50,460] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [2025-03-05 00:21:50,573] [pool-1-thread-10] Initializing /data/jay/camtest1.dm3: [testng] [2025-03-05 00:21:50,662] [pool-1-thread-1] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2025-03-05 00:21:50,786] [pool-1-thread-7] Initializing /data/qa-21761/example.dm4: [testng] [2025-03-05 00:21:51,118] [pool-1-thread-11] Initializing /data/jay/graphitedm3.dm3: [testng] [2025-03-05 00:21:51,493] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2025-03-05 00:21:52,595] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2025-03-05 00:21:53,179] [pool-1-thread-6] Initializing /data/chip/Nanogold-1.dm3: [testng] [2025-03-05 00:21:53,457] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [2025-03-05 00:21:53,654] [pool-1-thread-7] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2025-03-05 00:21:54,146] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2025-03-05 00:21:54,444] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 21 seconds Finished: SUCCESS