Started by upstream project "BIOFORMATS-test-repo" build number 365 originally caused by: Started by upstream project "Trigger" build number 391 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins15771964699461273462.sh + '[' olympus-oir = slidebook ']' ++ date +%u + '[' 3 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_58139_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 00:21:22,185 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 00:21:22,187 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - No custom configurators were discovered as a service. [testng] 00:21:22,187 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:21:22,188 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:21:22,188 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:21:22,188 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:21:22,189 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:21:22,189 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:21:22,189 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:21:22,190 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:21:22,191 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:21:22,192 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:21:22,397 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:21:22,397 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:21:22,419 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:21:22,419 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:21:22,425 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:21:22,425 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:21:22,425 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:21:22,426 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:21:22,426 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@3f6f6701 - End of configuration. [testng] 00:21:22,427 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@4f80542f - Registering current configuration as safe fallback point [testng] 00:21:22,427 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 238 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-05 00:21:22,436] [main] java.version = 17.0.2 [testng] 00:21:22,440 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:21:22,440 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:22,501 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-05_00-21-22.log] [testng] 00:21:22,503 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14bdbc74 - End of configuration. [testng] [2025-03-05 00:21:22,506] [main] testng.directory = /data [testng] [2025-03-05 00:21:22,506] [main] testng.configDirectory = /config [testng] [2025-03-05 00:21:22,520] [main] testng.multiplier = 1.0 [testng] [2025-03-05 00:21:22,522] [main] testng.in-memory = false [testng] [2025-03-05 00:21:22,522] [main] testng.allow-missing = false [testng] [2025-03-05 00:21:22,523] [main] user.language = en [testng] [2025-03-05 00:21:22,523] [main] user.country = ${user.country} [testng] [2025-03-05 00:21:22,523] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2025-03-05 00:21:49,574] [main] ---------------------------------------- [testng] [2025-03-05 00:21:49,575] [main] Total files: 320 [testng] [2025-03-05 00:21:49,575] [main] Scan time: 27.051 s (84 ms/file) [testng] [2025-03-05 00:21:49,575] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 196 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-05 00:33:05,490] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif: [testng] 00:33:05,491 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:33:05,491 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:05,492 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-05_00-33-05.log] [testng] 00:33:05,492 |-INFO in ch.qos.logback.core.sift.SiftProcessor@718c05de - End of configuration. [testng] [2025-03-05 00:33:06,036] [pool-1-thread-12] Initializing /data/qa-16881/P10D1 20150729.ome.tif: [testng] 00:33:06,036 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:33:06,036 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:06,037 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-05_00-33-06.log] [testng] 00:33:06,037 |-INFO in ch.qos.logback.core.sift.SiftProcessor@e1282e9 - End of configuration. [testng] [2025-03-05 00:33:06,623] [pool-1-thread-11] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: [testng] 00:33:06,623 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:33:06,623 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:06,624 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-05_00-33-06.log] [testng] 00:33:06,624 |-INFO in ch.qos.logback.core.sift.SiftProcessor@661aa2c0 - End of configuration. [testng] [2025-03-05 00:33:07,495] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: [testng] 00:33:07,496 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:33:07,496 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:07,497 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-05_00-33-07.log] [testng] 00:33:07,497 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1c736ec3 - End of configuration. [testng] [2025-03-05 00:33:08,038] [pool-1-thread-9] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info: [testng] 00:33:08,039 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:33:08,039 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:08,039 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-05_00-33-08.log] [testng] 00:33:08,040 |-INFO in ch.qos.logback.core.sift.SiftProcessor@62c78043 - End of configuration. [testng] [2025-03-05 00:33:08,469] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir: [testng] 00:33:08,469 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:33:08,469 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:08,470 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-05_00-33-08.log] [testng] 00:33:08,470 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4b2cd835 - End of configuration. [testng] [2025-03-05 00:33:09,030] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: [testng] 00:33:09,030 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:33:09,030 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:09,030 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-05_00-33-09.log] [testng] 00:33:09,031 |-INFO in ch.qos.logback.core.sift.SiftProcessor@50ecfb31 - End of configuration. [testng] [2025-03-05 00:33:09,597] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: [testng] 00:33:09,597 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:33:09,597 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:09,599 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-05_00-33-09.log] [testng] 00:33:09,599 |-INFO in ch.qos.logback.core.sift.SiftProcessor@65ed48ef - End of configuration. [testng] [2025-03-05 00:33:10,518] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: [testng] 00:33:10,519 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:33:10,519 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:10,519 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-05_00-33-10.log] [testng] 00:33:10,520 |-INFO in ch.qos.logback.core.sift.SiftProcessor@759d77a5 - End of configuration. [testng] [2025-03-05 00:33:11,327] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif: [testng] 00:33:11,327 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:33:11,328 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:11,328 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-05_00-33-11.log] [testng] 00:33:11,328 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b32ab7f - End of configuration. [testng] [2025-03-05 00:33:12,245] [pool-1-thread-3] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: [testng] 00:33:12,245 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:33:12,245 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:12,246 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-05_00-33-12.log] [testng] 00:33:12,246 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f65e4f6 - End of configuration. [testng] [2025-03-05 00:33:12,934] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir: [testng] 00:33:12,935 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:33:12,935 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:12,935 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-05_00-33-12.log] [testng] 00:33:12,935 |-INFO in ch.qos.logback.core.sift.SiftProcessor@60086230 - End of configuration. [testng] [2025-03-05 00:33:20,121] [pool-1-thread-7] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_4T_5Lambda-420-630-w10nm-s50nm.oir: [testng] [2025-03-05 00:33:20,698] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: [testng] [2025-03-05 00:33:21,843] [pool-1-thread-1] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif: [testng] [2025-03-05 00:33:22,874] [pool-1-thread-3] Initializing /data/qa-17331/60x zstack RS.ome.tif: [testng] [2025-03-05 00:33:23,563] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif: [testng] [2025-03-05 00:33:24,633] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi: [testng] [2025-03-05 00:33:25,137] [pool-1-thread-4] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir: [testng] [2025-03-05 00:34:16,272] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif: [testng] [2025-03-05 00:34:19,967] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: [testng] [2025-03-05 00:34:20,621] [pool-1-thread-11] Initializing /data/qa-16871/XY_0003.oir: [testng] [2025-03-05 00:34:21,157] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif: [testng] [2025-03-05 00:34:22,772] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif: [testng] [2025-03-05 00:34:23,659] [pool-1-thread-12] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: [testng] [2025-03-05 00:34:24,343] [pool-1-thread-2] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif: [testng] [2025-03-05 00:34:25,675] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: [testng] [2025-03-05 00:34:29,071] [pool-1-thread-6] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.vsi: [testng] [2025-03-05 00:34:29,891] [pool-1-thread-7] Initializing /data/qa-17335/Clipboard-1.tif: [testng] [2025-03-05 00:34:31,741] [pool-1-thread-3] Initializing /data/qa-17331/60x zstack RS.oir: [testng] [2025-03-05 00:34:32,341] [pool-1-thread-1] Initializing /data/qa-17409/Stitch_A01_G001.oir: [testng] [2025-03-05 00:34:33,082] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: [testng] [2025-03-05 00:34:33,862] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/zebra shg.oir: [testng] [2025-03-05 00:34:35,618] [pool-1-thread-10] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir: [testng] [2025-03-05 00:34:39,981] [pool-1-thread-5] Initializing /data/olympus/40X_4CH_XY.oir: [testng] [2025-03-05 00:34:40,600] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: [testng] [2025-03-05 00:34:43,480] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: [testng] [2025-03-05 00:34:44,743] [pool-1-thread-2] Initializing /data/qa-17270/stack1.oir: [testng] [2025-03-05 00:34:47,235] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir: [testng] [2025-03-05 00:34:48,203] [pool-1-thread-3] Initializing /data/olympus/calcium sparks_XYt.vsi: [testng] [2025-03-05 00:34:48,857] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir: [testng] [2025-03-05 00:34:50,931] [pool-1-thread-12] Initializing /data/qa-16881/P10-50 D2_0019.oir: [testng] [2025-03-05 00:34:52,179] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif: [testng] [2025-03-05 00:34:53,116] [pool-1-thread-1] Initializing /data/public/etienne/venus stack.oir: [testng] [2025-03-05 00:34:53,927] [pool-1-thread-3] Initializing /data/public/gh-4205/zenodo-13680725/matl.omp2info: [testng] [2025-03-05 00:35:04,093] [pool-1-thread-8] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_22Lambda-420-630-w10nm-s10nm.oir: [testng] [2025-03-05 00:35:04,933] [pool-1-thread-9] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: [testng] [2025-03-05 00:35:06,149] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: [testng] [2025-03-05 00:35:07,323] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif: [testng] [2025-03-05 00:35:09,418] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir: [testng] [2025-03-05 00:35:12,512] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: [testng] [2025-03-05 00:35:13,124] [pool-1-thread-7] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir: [testng] [2025-03-05 00:35:14,767] [pool-1-thread-12] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: [testng] [2025-03-05 00:35:15,778] [pool-1-thread-6] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif: [testng] [2025-03-05 00:35:16,362] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: [testng] [2025-03-05 00:35:17,593] [pool-1-thread-1] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: [testng] [2025-03-05 00:35:18,869] [pool-1-thread-9] Initializing /data/public/etienne/Clipboard-venus stack.tif: [testng] [2025-03-05 00:35:20,108] [pool-1-thread-2] Initializing /data/olympus/40X_4CH_XY.vsi: [testng] [2025-03-05 00:35:21,365] [pool-1-thread-7] Initializing /data/qa-17335/1.ome.tif: [testng] [2025-03-05 00:35:21,930] [pool-1-thread-12] Initializing /data/qa-17270/image1.oir: [testng] [2025-03-05 00:35:22,278] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: [testng] [2025-03-05 00:35:25,246] [pool-1-thread-1] Initializing /data/qa-17409/Clipboard.tif: [testng] [2025-03-05 00:35:26,166] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: [testng] [2025-03-05 00:35:27,032] [pool-1-thread-9] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif: [testng] [2025-03-05 00:35:27,577] [pool-1-thread-6] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif: [testng] [2025-03-05 00:35:29,563] [pool-1-thread-7] Initializing /data/public/imagesc-105684/1202-interval_30sec_sequence_frame_z stack.oir: [testng] [2025-03-05 00:35:30,312] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: [testng] [2025-03-05 00:35:32,415] [pool-1-thread-9] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif: [testng] [2025-03-05 00:35:33,319] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2.oir: [testng] [2025-03-05 00:35:33,779] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: [testng] [2025-03-05 00:35:34,402] [pool-1-thread-2] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: [testng] [2025-03-05 00:35:40,127] [pool-1-thread-8] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: [testng] [2025-03-05 00:35:42,630] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: [testng] [2025-03-05 00:35:45,480] [pool-1-thread-9] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: [testng] [2025-03-05 00:35:46,361] [pool-1-thread-1] Initializing /data/qa-17335/OSR-Z.ome.tif: [testng] [2025-03-05 00:35:50,764] [pool-1-thread-7] Initializing /data/qa-17293/Clipboard.tif: [testng] [2025-03-05 00:35:51,810] [pool-1-thread-6] Initializing /data/qa-16881/P10-50 D2.ome.tif: [testng] [2025-03-05 00:35:52,534] [pool-1-thread-8] Initializing /data/qa-17270/alexa488.oir: [testng] [2025-03-05 00:35:54,755] [pool-1-thread-1] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir: [testng] [2025-03-05 00:35:56,467] [pool-1-thread-9] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif: [testng] [2025-03-05 00:35:58,541] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: [testng] [2025-03-05 00:35:59,128] [pool-1-thread-5] Initializing /data/public/gh-4205/zenodo-13680725/Stitch_A01_G001.oir: [testng] [2025-03-05 00:35:59,816] [pool-1-thread-7] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: [testng] [2025-03-05 00:36:03,585] [pool-1-thread-9] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info: [testng] [2025-03-05 00:36:07,165] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir: [testng] [2025-03-05 00:36:08,881] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: [testng] [2025-03-05 00:36:11,742] [pool-1-thread-7] Initializing /data/qa-17335/1.oir: [testng] [2025-03-05 00:36:13,557] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: [testng] [2025-03-05 00:36:14,734] [pool-1-thread-5] Initializing /data/qa-17335/OSR-Z.oir: [testng] [2025-03-05 00:36:15,842] [pool-1-thread-10] Initializing /data/public/imagesc-105684/1202-interval_freeRun_sequence_frame.oir: [testng] [2025-03-05 00:36:17,812] [pool-1-thread-7] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir: [testng] [2025-03-05 00:36:20,814] [pool-1-thread-6] Initializing /data/qa-16881/P10-50 D2_0006.oir: [testng] [2025-03-05 00:36:21,779] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir: [testng] [2025-03-05 00:36:27,128] [pool-1-thread-6] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif: [testng] [2025-03-05 00:36:27,868] [pool-1-thread-5] Initializing /data/public/etienne/amy slice z stack_0001.oir: [testng] [2025-03-05 00:36:31,421] [pool-1-thread-10] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: [testng] [2025-03-05 00:36:32,696] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif: [testng] [2025-03-05 00:36:33,763] [pool-1-thread-7] Initializing /data/qa-17919/f10187.oir: [testng] [2025-03-05 00:36:53,432] [pool-1-thread-5] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: [testng] [2025-03-05 00:36:55,037] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif: [testng] [2025-03-05 00:36:57,849] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif: [testng] [2025-03-05 00:36:59,568] [pool-1-thread-10] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir: [testng] [2025-03-05 00:37:01,364] [pool-1-thread-8] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: [testng] [2025-03-05 00:37:02,009] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif: [testng] [2025-03-05 00:37:03,047] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif: [testng] [2025-03-05 00:37:05,379] [pool-1-thread-6] Initializing /data/olympus/calcium sparks_XYt.ome.tif: [testng] [2025-03-05 00:37:06,913] [pool-1-thread-10] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir: [testng] [2025-03-05 00:37:08,032] [pool-1-thread-12] Initializing /data/qa-17922/example_multipart.oir: [testng] [2025-03-05 00:37:30,966] [pool-1-thread-1] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: [testng] [2025-03-05 00:37:32,772] [pool-1-thread-6] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif: [testng] [2025-03-05 00:37:33,184] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: [testng] [2025-03-05 00:37:34,019] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: [testng] [2025-03-05 00:37:36,966] [pool-1-thread-5] Initializing /data/olympus/Clipboard-XYZt.tif: [testng] [2025-03-05 00:37:37,495] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir: [testng] [2025-03-05 00:37:38,964] [pool-1-thread-1] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_4Z_5Lambda-420-630-w10nm-s50nm.oir: [testng] [2025-03-05 00:37:41,401] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: [testng] [2025-03-05 00:37:41,866] [pool-1-thread-8] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info: [testng] [2025-03-05 00:37:44,902] [pool-1-thread-5] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: [testng] [2025-03-05 00:37:49,961] [pool-1-thread-6] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir: [testng] [2025-03-05 00:37:51,051] [pool-1-thread-5] Initializing /data/qa-17270/Clipboard-image1.tif: [testng] [2025-03-05 00:37:56,168] [pool-1-thread-1] Initializing /data/public/imagesc-105684/1202-interval_10sec_sequence_frame.oir: [testng] [2025-03-05 00:37:57,376] [pool-1-thread-6] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: [testng] [2025-03-05 00:37:59,930] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: [testng] [2025-03-05 00:38:06,029] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: [testng] [2025-03-05 00:38:08,000] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif: [testng] [2025-03-05 00:38:12,940] [pool-1-thread-1] Initializing /data/qa-16881/P10D1 20150729_0019.oir: [testng] [2025-03-05 00:38:13,538] [pool-1-thread-10] Initializing /data/public/etienne/venus stack.ome.tif: [testng] [2025-03-05 00:38:14,217] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif: [testng] [2025-03-05 00:38:18,301] [pool-1-thread-5] Initializing /data/olympus/Stitched_XYZ.ome.tif: [testng] [2025-03-05 00:38:19,130] [pool-1-thread-11] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif: [testng] [2025-03-05 00:38:22,527] [pool-1-thread-10] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: [testng] [2025-03-05 00:38:24,686] [pool-1-thread-1] Initializing /data/qa-17917/f10010.oir: [testng] [2025-03-05 00:38:53,675] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: [testng] [2025-03-05 00:38:58,313] [pool-1-thread-11] Initializing /data/qa-17331/Clipboard.tif: [testng] [2025-03-05 00:39:00,930] [pool-1-thread-5] Initializing /data/public/etienne/coupe shg stack_0001.oir: [testng] [2025-03-05 00:39:07,848] [pool-1-thread-6] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir: [testng] [2025-03-05 00:39:11,889] [pool-1-thread-11] Initializing /data/olympus/40X_4CH_XY.ome.tif: [testng] [2025-03-05 00:39:13,223] [pool-1-thread-3] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif: [testng] [2025-03-05 00:39:15,685] [pool-1-thread-5] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif: [testng] [2025-03-05 00:39:17,761] [pool-1-thread-10] Initializing /data/olympus/XYZt.oir: [testng] [2025-03-05 00:39:23,353] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif: [testng] [2025-03-05 00:39:26,011] [pool-1-thread-3] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: [testng] [2025-03-05 00:39:27,421] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif: [testng] [2025-03-05 00:39:28,512] [pool-1-thread-11] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif: [testng] [2025-03-05 00:39:31,845] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir: [testng] [2025-03-05 00:39:36,866] [pool-1-thread-3] Initializing /data/olympus/Stitched_XYZ.vsi: [testng] [2025-03-05 00:39:37,400] [pool-1-thread-6] Initializing /data/qa-17335/stimulation_0001_LSM.oir: [testng] [2025-03-05 00:39:40,063] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif: [testng] [2025-03-05 00:39:42,960] [pool-1-thread-5] Initializing /data/qa-16881/P10D1 20150729_0024.oir: [testng] [2025-03-05 00:39:44,507] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif: [testng] [2025-03-05 00:39:45,973] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif: [testng] [2025-03-05 00:39:49,513] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif: [testng] [2025-03-05 00:39:52,752] [pool-1-thread-6] Initializing /data/cudmore/20190401__0005.oir: [testng] [2025-03-05 00:40:01,745] [pool-1-thread-3] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif: [testng] [2025-03-05 00:40:02,949] [pool-1-thread-5] Initializing /data/olympus/2017-04-20/Clipboard.tif: [testng] [2025-03-05 00:40:04,631] [pool-1-thread-11] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: [testng] [2025-03-05 00:40:09,031] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: [testng] [2025-03-05 00:40:18,729] [pool-1-thread-7] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif: [testng] [2025-03-05 00:40:20,793] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif: [testng] [2025-03-05 00:40:23,375] [pool-1-thread-5] Initializing /data/olympus/calcium sparks_XYt.oir: [testng] [2025-03-05 00:40:24,445] [pool-1-thread-10] Initializing /data/olympus/spectral_scan_XYL.ome.tif: [testng] [2025-03-05 00:40:29,955] [pool-1-thread-7] Initializing /data/qa-17270/stack1.ome.tif: [testng] [2025-03-05 00:40:32,463] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir: [testng] [2025-03-05 00:40:33,028] [pool-1-thread-10] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: [testng] [2025-03-05 00:40:36,055] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif: [testng] [2025-03-05 00:40:38,610] [pool-1-thread-7] Initializing /data/public/gh-4205/zenodo-12773657/DAPI-mCherry_3T_4Z_5Lambda-420-630-w10nm-s50nm.oir: [testng] [2025-03-05 00:40:42,092] [pool-1-thread-10] Initializing /data/qa-17270/image1.ome.tif: [testng] [2025-03-05 00:40:43,924] [pool-1-thread-3] Initializing /data/public/imagesc-105684/1202-interval_30sec_sequence_frame.oir: [testng] [2025-03-05 00:40:46,462] [pool-1-thread-6] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: [testng] [2025-03-05 00:40:49,012] [pool-1-thread-5] Initializing /data/qa-17270/alexa488.ome.tif: [testng] [2025-03-05 00:40:53,672] [pool-1-thread-10] Initializing /data/qa-17270/Clipboard-stack1.tif: [testng] [2025-03-05 00:40:57,040] [pool-1-thread-11] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: [testng] [2025-03-05 00:40:58,558] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif: [testng] [2025-03-05 00:40:59,732] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: [testng] [2025-03-05 00:41:03,945] [pool-1-thread-10] Initializing /data/qa-16871/Clipboard.tif: [testng] [2025-03-05 00:41:05,658] [pool-1-thread-11] Initializing /data/qa-16871/XY_0003.ome.tif: [testng] [2025-03-05 00:41:06,461] [pool-1-thread-3] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: [testng] [2025-03-05 00:41:07,141] [pool-1-thread-7] Initializing /data/qa-17270/Clipboard-alexa488.tif: [testng] [2025-03-05 00:41:09,221] [pool-1-thread-5] Initializing /data/qa-16881/P10D1 20150729.oir: [testng] [2025-03-05 00:41:11,111] [pool-1-thread-6] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir: [testng] [2025-03-05 00:41:14,243] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: [testng] [2025-03-05 00:41:15,252] [pool-1-thread-10] Initializing /data/qa-17335/Clipboard-OSR-Z.tif: [testng] [2025-03-05 00:41:17,186] [pool-1-thread-7] Initializing /data/qa-21508/Stitch_A01_G008.oir: [testng] [2025-03-05 00:41:18,636] [pool-1-thread-5] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: [testng] [2025-03-05 00:41:23,787] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/Clipboard.tif: [testng] [2025-03-05 00:41:25,036] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir: [testng] [2025-03-05 00:41:28,925] [pool-1-thread-5] Initializing /data/olympus/XYZt.vsi: [testng] [2025-03-05 00:41:32,595] [pool-1-thread-11] Initializing /data/olympus/calcium sparks.jpg: [testng] [2025-03-05 00:41:33,306] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: [testng] [2025-03-05 00:41:33,804] [pool-1-thread-5] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif: [testng] [2025-03-05 00:41:35,446] [pool-1-thread-12] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif: [testng] [2025-03-05 00:41:38,291] [pool-1-thread-11] Initializing /data/olympus/Stitched_XYZ.oir: [testng] [2025-03-05 00:41:41,244] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif: [testng] [2025-03-05 00:41:42,294] [pool-1-thread-12] Initializing /data/olympus/spectral_scan_XYL.oir: [testng] [2025-03-05 00:41:43,019] [pool-1-thread-5] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: [testng] [2025-03-05 00:41:47,722] [pool-1-thread-11] Initializing /data/olympus/XYZt.ome.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 10388, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 49 minutes 4 seconds Finished: SUCCESS