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Started by upstream project "BIOFORMATS-test-repo" build number 366 originally caused by: Started by upstream project "Trigger" build number 392 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins15407143127406098533.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_58295_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 00:22:52,658 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 00:22:52,659 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - No custom configurators were discovered as a service. [testng] 00:22:52,659 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:22:52,660 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:22:52,660 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:22:52,661 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:22:52,661 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:22:52,661 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:22:52,661 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:22:52,662 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:22:52,662 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:22:52,662 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:22:52,822 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:22:52,822 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:22:52,847 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:22:52,847 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:22:52,853 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:22:52,853 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:22:52,853 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:22:52,854 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:22:52,854 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@47d9a273 - End of configuration. [testng] 00:22:52,854 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@4659191b - Registering current configuration as safe fallback point [testng] 00:22:52,855 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 194 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-06 00:22:52,863] [main] java.version = 21 [testng] 00:22:52,866 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:22:52,866 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:52,907 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-06_00-22-52.log] [testng] 00:22:52,908 |-INFO in ch.qos.logback.core.sift.SiftProcessor@69504ae9 - End of configuration. [testng] [2025-03-06 00:22:52,910] [main] testng.directory = /data [testng] [2025-03-06 00:22:52,910] [main] testng.configDirectory = /config [testng] [2025-03-06 00:22:52,919] [main] testng.multiplier = 1.0 [testng] [2025-03-06 00:22:52,919] [main] testng.in-memory = false [testng] [2025-03-06 00:22:52,920] [main] testng.allow-missing = false [testng] [2025-03-06 00:22:52,920] [main] user.language = en [testng] [2025-03-06 00:22:52,920] [main] user.country = ${user.country} [testng] [2025-03-06 00:22:52,920] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2025-03-06 00:22:56,366] [main] ---------------------------------------- [testng] [2025-03-06 00:22:56,366] [main] Total files: 103 [testng] [2025-03-06 00:22:56,366] [main] Scan time: 3.446 s (33 ms/file) [testng] [2025-03-06 00:22:56,367] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-06 00:23:16,228] [pool-1-thread-1] Initializing /data/jay/dnasample.tif: [testng] 00:23:16,229 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:23:16,229 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:16,231 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-06_00-23-16.log] [testng] 00:23:16,231 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ae96745 - End of configuration. [testng] [2025-03-06 00:23:16,628] [pool-1-thread-12] Initializing /data/jay/DMtest2.dm3: [testng] 00:23:16,628 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:23:16,628 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:16,629 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-06_00-23-16.log] [testng] 00:23:16,629 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17559e68 - End of configuration. [testng] [2025-03-06 00:23:16,726] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] 00:23:16,726 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:23:16,726 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:16,727 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-06_00-23-16.log] [testng] 00:23:16,728 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a0e9321 - End of configuration. [testng] [2025-03-06 00:23:16,834] [pool-1-thread-10] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] 00:23:16,834 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:23:16,835 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:16,835 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-06_00-23-16.log] [testng] 00:23:16,836 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49df892d - End of configuration. [testng] [2025-03-06 00:23:16,900] [pool-1-thread-9] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] 00:23:16,900 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:23:16,900 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:16,901 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-06_00-23-16.log] [testng] 00:23:16,901 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5272c96d - End of configuration. [testng] [2025-03-06 00:23:17,217] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] 00:23:17,218 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:23:17,218 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:17,220 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-06_00-23-17.log] [testng] 00:23:17,221 |-INFO in ch.qos.logback.core.sift.SiftProcessor@65752038 - End of configuration. [testng] [2025-03-06 00:23:17,377] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] 00:23:17,377 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:23:17,378 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:17,379 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-06_00-23-17.log] [testng] 00:23:17,379 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3bc9ab94 - End of configuration. [testng] [2025-03-06 00:23:17,863] [pool-1-thread-6] Initializing /data/chip/Nanogold-1.dm3: [testng] 00:23:17,863 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:23:17,863 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:17,864 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-06_00-23-17.log] [testng] 00:23:17,865 |-INFO in ch.qos.logback.core.sift.SiftProcessor@28b099e6 - End of configuration. [testng] [2025-03-06 00:23:18,055] [pool-1-thread-5] Initializing /data/qa-7642/8.dm4: [testng] 00:23:18,056 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:23:18,056 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:18,057 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-06_00-23-18.log] [testng] 00:23:18,057 |-INFO in ch.qos.logback.core.sift.SiftProcessor@ecba638 - End of configuration. [testng] [2025-03-06 00:23:18,273] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] 00:23:18,274 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:23:18,274 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:18,274 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-06_00-23-18.log] [testng] 00:23:18,275 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21e2bb20 - End of configuration. [testng] [2025-03-06 00:23:18,386] [pool-1-thread-3] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] 00:23:18,386 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:23:18,386 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:18,387 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-06_00-23-18.log] [testng] 00:23:18,388 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7987611c - End of configuration. [testng] [2025-03-06 00:23:18,449] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e4.tif: [testng] 00:23:18,450 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:23:18,450 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:18,451 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-06_00-23-18.log] [testng] 00:23:18,451 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a841d3a - End of configuration. [testng] [2025-03-06 00:23:21,842] [pool-1-thread-10] Initializing /data/melissa/annotation-test.dm3: [testng] [2025-03-06 00:23:22,432] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2025-03-06 00:23:23,061] [pool-1-thread-2] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2025-03-06 00:23:23,721] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] [2025-03-06 00:23:23,803] [pool-1-thread-12] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2025-03-06 00:23:24,313] [pool-1-thread-4] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2025-03-06 00:23:24,549] [pool-1-thread-7] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2025-03-06 00:23:26,841] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2025-03-06 00:23:27,477] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2025-03-06 00:23:27,702] [pool-1-thread-3] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] [2025-03-06 00:23:28,763] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2025-03-06 00:23:29,884] [pool-1-thread-6] Initializing /data/samples/test-tiles.dm3: [testng] [2025-03-06 00:23:31,001] [pool-1-thread-1] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2025-03-06 00:23:31,913] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [2025-03-06 00:23:32,121] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2025-03-06 00:23:32,297] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] [2025-03-06 00:23:32,457] [pool-1-thread-5] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2025-03-06 00:23:34,839] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2025-03-06 00:23:35,490] [pool-1-thread-5] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2025-03-06 00:23:35,879] [pool-1-thread-1] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] [2025-03-06 00:23:37,120] [pool-1-thread-3] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] [2025-03-06 00:23:37,612] [pool-1-thread-12] Initializing /data/melissa/annotation-test.tif: [testng] [2025-03-06 00:23:38,782] [pool-1-thread-11] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2025-03-06 00:23:39,012] [pool-1-thread-8] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2025-03-06 00:23:39,847] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2025-03-06 00:23:40,869] [pool-1-thread-4] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2025-03-06 00:23:42,237] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2025-03-06 00:23:42,608] [pool-1-thread-10] Initializing /data/jay/camtest1.dm3: [testng] [2025-03-06 00:23:43,094] [pool-1-thread-5] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2025-03-06 00:23:44,891] [pool-1-thread-8] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2025-03-06 00:23:45,281] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2025-03-06 00:23:45,905] [pool-1-thread-2] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] [2025-03-06 00:23:46,540] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2025-03-06 00:23:47,203] [pool-1-thread-7] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2025-03-06 00:23:47,793] [pool-1-thread-8] Initializing /data/jay/dnasample1.dm3: [testng] [2025-03-06 00:23:48,008] [pool-1-thread-1] Initializing /data/jay/Carbon.34.dm3: [testng] [2025-03-06 00:23:48,595] [pool-1-thread-9] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2025-03-06 00:23:49,904] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2025-03-06 00:23:50,141] [pool-1-thread-6] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2025-03-06 00:23:51,415] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2025-03-06 00:23:51,806] [pool-1-thread-10] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2025-03-06 00:23:52,386] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2025-03-06 00:23:52,630] [pool-1-thread-3] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] [2025-03-06 00:23:55,314] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2025-03-06 00:23:55,988] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2025-03-06 00:23:56,269] [pool-1-thread-10] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2025-03-06 00:23:56,612] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2025-03-06 00:23:56,988] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2025-03-06 00:23:57,803] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2025-03-06 00:23:59,377] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2025-03-06 00:23:59,607] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2025-03-06 00:24:01,294] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] [2025-03-06 00:24:02,013] [pool-1-thread-2] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2025-03-06 00:24:02,286] [pool-1-thread-5] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2025-03-06 00:24:04,596] [pool-1-thread-7] Initializing /data/jay/graphitedm3.dm3: [testng] [2025-03-06 00:24:05,495] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2025-03-06 00:24:05,939] [pool-1-thread-4] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] [2025-03-06 00:24:06,395] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2025-03-06 00:24:06,671] [pool-1-thread-3] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2025-03-06 00:24:07,841] [pool-1-thread-6] Initializing /data/jay/smallerfile.dm3: [testng] [2025-03-06 00:24:08,290] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [2025-03-06 00:24:08,497] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2025-03-06 00:24:09,250] [pool-1-thread-4] Initializing /data/jay/ViewDMtest.dm3: [testng] [2025-03-06 00:24:09,517] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] [2025-03-06 00:24:10,093] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2025-03-06 00:24:10,408] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2025-03-06 00:24:11,129] [pool-1-thread-7] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2025-03-06 00:24:12,892] [pool-1-thread-6] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2025-03-06 00:24:14,366] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2025-03-06 00:24:15,208] [pool-1-thread-3] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2025-03-06 00:24:15,929] [pool-1-thread-11] Initializing /data/jay/recAmaghi.dm3: [testng] [2025-03-06 00:24:16,219] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2025-03-06 00:24:16,588] [pool-1-thread-10] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2025-03-06 00:24:16,965] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2025-03-06 00:24:17,168] [pool-1-thread-8] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2025-03-06 00:24:19,073] [pool-1-thread-4] Initializing /data/ofra/lowloss.dm3: [testng] [2025-03-06 00:24:19,227] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2025-03-06 00:24:20,346] [pool-1-thread-1] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2025-03-06 00:24:20,499] [pool-1-thread-3] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] [2025-03-06 00:24:21,230] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2025-03-06 00:24:22,317] [pool-1-thread-4] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2025-03-06 00:24:23,690] [pool-1-thread-3] Initializing /data/jay/DMtest.dm3: [testng] [2025-03-06 00:24:23,867] [pool-1-thread-5] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2025-03-06 00:24:25,062] [pool-1-thread-10] Initializing /data/qa-21761/example.dm4: [testng] [2025-03-06 00:24:25,226] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2025-03-06 00:24:25,449] [pool-1-thread-11] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 45 seconds Finished: SUCCESS