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Started by upstream project "BIOFORMATS-test-repo" build number 366 originally caused by: Started by upstream project "Trigger" build number 392 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@9 [BIOFORMATS-test-folder@9] $ /bin/bash -xe /tmp/jenkins2160176150595896934.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_58335_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 00:49:54,771 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 00:49:54,772 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - No custom configurators were discovered as a service. [testng] 00:49:54,772 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:49:54,773 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:49:54,774 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:49:54,774 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:49:54,775 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:49:54,775 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:49:54,775 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:49:54,776 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:49:54,776 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:49:54,776 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:49:54,940 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:49:54,940 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:49:54,966 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:49:54,966 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:49:54,972 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:49:54,972 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:49:54,973 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:49:54,973 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:49:54,973 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@4310d43 - End of configuration. [testng] 00:49:54,974 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@1b11171f - Registering current configuration as safe fallback point [testng] 00:49:54,974 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 199 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-06 00:49:54,983] [main] java.version = 21 [testng] 00:49:54,986 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:49:54,987 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:49:55,053 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-06_00-49-55.log] [testng] 00:49:55,055 |-INFO in ch.qos.logback.core.sift.SiftProcessor@69504ae9 - End of configuration. [testng] [2025-03-06 00:49:55,058] [main] testng.directory = /data [testng] [2025-03-06 00:49:55,058] [main] testng.configDirectory = /config [testng] [2025-03-06 00:49:55,072] [main] testng.multiplier = 1.0 [testng] [2025-03-06 00:49:55,073] [main] testng.in-memory = false [testng] [2025-03-06 00:49:55,073] [main] testng.allow-missing = false [testng] [2025-03-06 00:49:55,073] [main] user.language = en [testng] [2025-03-06 00:49:55,073] [main] user.country = ${user.country} [testng] [2025-03-06 00:49:55,073] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2025-03-06 00:50:14,660] [main] ---------------------------------------- [testng] [2025-03-06 00:50:14,660] [main] Total files: 259 [testng] [2025-03-06 00:50:14,660] [main] Scan time: 19.587 s (75 ms/file) [testng] [2025-03-06 00:50:14,660] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-06 00:57:00,875] [pool-1-thread-1] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] 00:57:00,875 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:57:00,875 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:57:00,877 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-06_00-57-00.log] [testng] 00:57:00,877 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79d83bed - End of configuration. [testng] [2025-03-06 00:57:02,644] [pool-1-thread-12] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] 00:57:02,644 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:57:02,645 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:57:02,645 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-06_00-57-02.log] [testng] 00:57:02,646 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a18e47 - End of configuration. [testng] [2025-03-06 00:57:03,431] [pool-1-thread-11] Initializing /data/johannes/step1.bmp: [testng] 00:57:03,431 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:57:03,431 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:57:03,432 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-06_00-57-03.log] [testng] 00:57:03,432 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5890eee9 - End of configuration. [testng] [2025-03-06 00:57:03,525] [pool-1-thread-10] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] 00:57:03,525 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:57:03,525 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:57:03,526 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-06_00-57-03.log] [testng] 00:57:03,526 |-INFO in ch.qos.logback.core.sift.SiftProcessor@319f3339 - End of configuration. [testng] [2025-03-06 00:57:03,977] [pool-1-thread-9] Initializing /data/johannes/step3.bmp: [testng] 00:57:03,977 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:57:03,978 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:57:03,978 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-06_00-57-03.log] [testng] 00:57:03,979 |-INFO in ch.qos.logback.core.sift.SiftProcessor@78733ad1 - End of configuration. [testng] [2025-03-06 00:57:04,065] [pool-1-thread-8] Initializing /data/brian/Kaede15.oib: [testng] 00:57:04,065 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:57:04,066 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:57:04,066 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-06_00-57-04.log] [testng] 00:57:04,067 |-INFO in ch.qos.logback.core.sift.SiftProcessor@361567d0 - End of configuration. [testng] [2025-03-06 00:57:04,696] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] 00:57:04,696 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:57:04,696 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:57:04,697 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-06_00-57-04.log] [testng] 00:57:04,697 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56875248 - End of configuration. [testng] [2025-03-06 00:57:05,442] [pool-1-thread-6] Initializing /data/molly/11OCT3.OIF: [testng] 00:57:05,443 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:57:05,443 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:57:05,444 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-06_00-57-05.log] [testng] 00:57:05,444 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5ed926c1 - End of configuration. [testng] [2025-03-06 00:57:37,039] [pool-1-thread-5] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] 00:57:37,039 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:57:37,039 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:57:37,040 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-06_00-57-37.log] [testng] 00:57:37,040 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d727ce8 - End of configuration. [testng] [2025-03-06 00:57:41,086] [pool-1-thread-4] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] 00:57:41,087 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:57:41,087 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:57:41,087 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-06_00-57-41.log] [testng] 00:57:41,088 |-INFO in ch.qos.logback.core.sift.SiftProcessor@75efce7 - End of configuration. [testng] [2025-03-06 00:57:41,409] [pool-1-thread-3] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] 00:57:41,410 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:57:41,410 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:57:41,410 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-06_00-57-41.log] [testng] 00:57:41,411 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1286aed8 - End of configuration. [testng] [2025-03-06 00:57:42,343] [pool-1-thread-2] Initializing /data/dan/outerEV1solu6new.oib: [testng] 00:57:42,343 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:57:42,343 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:57:42,344 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-06_00-57-42.log] [testng] 00:57:42,345 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a6c22e5 - End of configuration. [testng] [2025-03-06 00:57:46,009] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2025-03-06 00:57:47,234] [pool-1-thread-9] Initializing /data/brian/PA-GFP-3.oib: [testng] [2025-03-06 00:57:48,638] [pool-1-thread-4] Initializing /data/glen/simulstack.oif: [testng] [2025-03-06 00:57:51,152] [pool-1-thread-10] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2025-03-06 00:57:52,615] [pool-1-thread-2] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2025-03-06 00:57:53,330] [pool-1-thread-8] Initializing /data/glen/singleseqframe.oib: [testng] [2025-03-06 00:57:53,873] [pool-1-thread-7] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2025-03-06 00:57:54,343] [pool-1-thread-12] Initializing /data/yoshihito/XY.oib: [testng] [2025-03-06 00:57:57,900] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2025-03-06 00:57:59,398] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2025-03-06 00:58:00,591] [pool-1-thread-2] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2025-03-06 00:58:01,198] [pool-1-thread-12] Initializing /data/glen/seqlinestack.oib: [testng] [2025-03-06 00:58:02,114] [pool-1-thread-8] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2025-03-06 00:58:02,728] [pool-1-thread-7] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2025-03-06 00:58:06,827] [pool-1-thread-9] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2025-03-06 00:58:07,355] [pool-1-thread-2] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] [2025-03-06 00:58:08,098] [pool-1-thread-8] Initializing /data/tom/zseries-test.oib: [testng] [2025-03-06 00:58:09,030] [pool-1-thread-7] Initializing /data/glen/singleseqframe.oif: [testng] [2025-03-06 00:58:09,698] [pool-1-thread-11] Initializing /data/glen/singlesimul.oib: [testng] [2025-03-06 00:58:10,187] [pool-1-thread-12] Initializing /data/molly/11OCT6.OIF: [testng] [2025-03-06 00:58:25,102] [pool-1-thread-9] Initializing /data/jae/Image0001.oib: [testng] [2025-03-06 00:58:26,214] [pool-1-thread-5] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2025-03-06 00:58:27,895] [pool-1-thread-11] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2025-03-06 00:58:33,888] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2025-03-06 00:58:35,786] [pool-1-thread-9] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2025-03-06 00:58:41,014] [pool-1-thread-5] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2025-03-06 00:58:46,944] [pool-1-thread-8] Initializing /data/stefan/yc2_live-03.oib: [testng] [2025-03-06 00:58:55,555] [pool-1-thread-8] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2025-03-06 00:58:59,664] [pool-1-thread-9] Initializing /data/stefan/cytosol_03e.oib: [testng] [2025-03-06 00:59:01,697] [pool-1-thread-8] Initializing /data/david/Image0016.oib: [testng] [2025-03-06 00:59:07,299] [pool-1-thread-8] Initializing /data/johannes/step5b.bmp: [testng] [2025-03-06 00:59:09,593] [pool-1-thread-9] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2025-03-06 00:59:10,985] [pool-1-thread-7] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2025-03-06 00:59:11,864] [pool-1-thread-2] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2025-03-06 00:59:14,741] [pool-1-thread-8] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2025-03-06 00:59:16,884] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] [2025-03-06 00:59:20,368] [pool-1-thread-7] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2025-03-06 00:59:23,431] [pool-1-thread-9] Initializing /data/tom/RGB-1.avi: [testng] [2025-03-06 00:59:25,936] [pool-1-thread-8] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2025-03-06 00:59:28,072] [pool-1-thread-7] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2025-03-06 00:59:29,374] [pool-1-thread-9] Initializing /data/chris/missegragation-15.oib: [testng] [2025-03-06 00:59:34,590] [pool-1-thread-7] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2025-03-06 00:59:35,722] [pool-1-thread-8] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2025-03-06 00:59:36,688] [pool-1-thread-9] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2025-03-06 00:59:43,262] [pool-1-thread-8] Initializing /data/brian/Lambda10nm.oib: [testng] [2025-03-06 00:59:44,718] [pool-1-thread-7] Initializing /data/johannes/step4b.bmp: [testng] [2025-03-06 00:59:47,485] [pool-1-thread-7] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2025-03-06 00:59:48,997] [pool-1-thread-8] Initializing /data/monica/Image0056.oif: [testng] [2025-03-06 00:59:51,603] [pool-1-thread-9] Initializing /data/glen/singlesimul.oif: [testng] [2025-03-06 00:59:55,904] [pool-1-thread-7] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2025-03-06 01:00:02,865] [pool-1-thread-7] Initializing /data/pedro/plv-test.oib: [testng] [2025-03-06 01:00:11,917] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2025-03-06 01:00:17,992] [pool-1-thread-7] Initializing /data/marc/V0606J.oib: [testng] [2025-03-06 01:00:22,279] [pool-1-thread-3] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2025-03-06 01:00:26,186] [pool-1-thread-3] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2025-03-06 01:00:31,713] [pool-1-thread-3] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2025-03-06 01:00:37,075] [pool-1-thread-7] Initializing /data/johannes/step4.bmp: [testng] [2025-03-06 01:00:39,888] [pool-1-thread-7] Initializing /data/marc/V0606L.oib: [testng] [2025-03-06 01:00:41,536] [pool-1-thread-8] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] [2025-03-06 01:00:43,036] [pool-1-thread-10] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2025-03-06 01:00:45,519] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2025-03-06 01:00:49,070] [pool-1-thread-8] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2025-03-06 01:00:49,952] [pool-1-thread-10] Initializing /data/simon/never_worked.oib: [testng] [2025-03-06 01:00:53,057] [pool-1-thread-9] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] [2025-03-06 01:00:55,283] [pool-1-thread-10] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2025-03-06 01:00:58,628] [pool-1-thread-9] Initializing /data/glen/4205basal106072.oif: [testng] [2025-03-06 01:01:04,594] [pool-1-thread-7] Initializing /data/brian/CFP-GFP2.oib: [testng] [2025-03-06 01:01:06,175] [pool-1-thread-10] Initializing /data/michael/CELL3.oib: [testng] [2025-03-06 01:01:12,833] [pool-1-thread-7] Initializing /data/glen/simulstack.oib: [testng] [2025-03-06 01:01:14,332] [pool-1-thread-10] Initializing /data/molly/11OCT11.OIF: [testng] [2025-03-06 01:01:33,342] [pool-1-thread-7] Initializing /data/christian/20min.oif: [testng] [2025-03-06 01:01:33,945] [pool-1-thread-8] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2025-03-06 01:01:38,536] [pool-1-thread-8] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2025-03-06 01:01:43,572] [pool-1-thread-8] Initializing /data/aryeh/030408 2 1.oib: [testng] [2025-03-06 01:01:48,448] [pool-1-thread-8] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] [2025-03-06 01:01:52,460] [pool-1-thread-8] Initializing /data/david/Image0016.oif: [testng] [2025-03-06 01:01:53,523] [pool-1-thread-7] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2025-03-06 01:01:57,488] [pool-1-thread-7] Initializing /data/molly/11OCT7.OIF: [testng] [2025-03-06 01:02:53,869] [pool-1-thread-2] Initializing /data/simon/used_to_work.oib: [testng] [2025-03-06 01:03:00,269] [pool-1-thread-2] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] [2025-03-06 01:03:14,901] [pool-1-thread-8] Initializing /data/brian/LILY POLLEN.oib: [testng] [2025-03-06 01:03:21,761] [pool-1-thread-8] Initializing /data/glen/111407.oif: [testng] [2025-03-06 01:06:12,953] [pool-1-thread-1] Initializing /data/brian/lambda02nm.oib: [testng] [2025-03-06 01:06:20,004] [pool-1-thread-1] Initializing /data/glen/Null file/test no change.oif: [testng] [2025-03-06 01:07:05,069] [pool-1-thread-1] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2025-03-06 01:07:12,415] [pool-1-thread-1] Initializing /data/stefan/cytosol_01a.oif: [testng] [2025-03-06 01:10:25,983] [pool-1-thread-5] Initializing /data/yoshihito/XY.oif: [testng] [2025-03-06 01:10:51,093] [pool-1-thread-5] Initializing /data/molly/11OCT8.OIF: [testng] [2025-03-06 01:13:24,362] [pool-1-thread-4] Initializing /data/molly/11OCT9.OIF: [testng] [2025-03-06 01:14:25,243] [pool-1-thread-11] Initializing /data/qa-17748/Image0098.oib: [testng] [2025-03-06 01:14:29,352] [pool-1-thread-11] Initializing /data/glen/notsaturated.oib: [testng] [2025-03-06 01:14:35,867] [pool-1-thread-11] Initializing /data/glen/Null file/test change.oif: [testng] [2025-03-06 01:15:24,251] [pool-1-thread-11] Initializing /data/allan/62909#1.oib: [testng] [2025-03-06 01:15:30,966] [pool-1-thread-11] Initializing /data/molly/11OCT4.OIF: [testng] [2025-03-06 01:15:57,516] [pool-1-thread-3] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2025-03-06 01:16:05,330] [pool-1-thread-3] Initializing /data/glen/seqlinestack.oif: [testng] [2025-03-06 01:23:04,700] [pool-1-thread-8] Initializing /data/karl/Image0009.oib: [testng] [2025-03-06 01:23:11,500] [pool-1-thread-8] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2025-03-06 01:24:03,545] [pool-1-thread-8] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2025-03-06 01:24:11,220] [pool-1-thread-8] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2025-03-06 01:25:53,756] [pool-1-thread-12] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] [2025-03-06 01:26:17,556] [pool-1-thread-7] Initializing /data/sten/01.oib: [testng] [2025-03-06 01:26:26,449] [pool-1-thread-7] Initializing /data/stefan/cytosol_08b.oif: [testng] [2025-03-06 01:31:21,267] [pool-1-thread-8] Initializing /data/aryeh/1h.oib: [testng] [2025-03-06 01:31:37,326] [pool-1-thread-8] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] [2025-03-06 01:33:00,590] [pool-1-thread-8] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2025-03-06 01:33:12,678] [pool-1-thread-8] Initializing /data/qa-17748/Image0079.oib: [testng] [2025-03-06 01:33:21,637] [pool-1-thread-8] Initializing /data/glen/singleseqline.oib: [testng] [2025-03-06 01:33:30,487] [pool-1-thread-8] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] [2025-03-06 01:33:42,661] [pool-1-thread-8] Initializing /data/aryeh/control_test.oib: [testng] [2025-03-06 01:33:49,537] [pool-1-thread-10] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2025-03-06 01:34:17,176] [pool-1-thread-8] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2025-03-06 01:34:28,081] [pool-1-thread-8] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2025-03-06 01:34:38,494] [pool-1-thread-8] Initializing /data/molly/11OCT10.OIF: [testng] [2025-03-06 01:36:19,071] [pool-1-thread-9] Initializing /data/brian/FLIP.oib: [testng] [2025-03-06 01:36:30,190] [pool-1-thread-9] Initializing /data/molly/11OCT5.OIF: [testng] [2025-03-06 01:38:35,701] [pool-1-thread-10] Initializing /data/yasunori/series_1.oib: [testng] [2025-03-06 01:38:43,785] [pool-1-thread-10] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2025-03-06 01:38:50,387] [pool-1-thread-10] Initializing /data/johannes/step2.bmp: [testng] [2025-03-06 01:38:53,396] [pool-1-thread-10] Initializing /data/kay/IM2pg.oib: [testng] [2025-03-06 01:39:01,574] [pool-1-thread-10] Initializing /data/glen/singleseqline.oif: [testng] [2025-03-06 01:40:03,455] [pool-1-thread-10] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2025-03-06 01:42:54,898] [pool-1-thread-12] Initializing /data/molly/11OCT2.OIF: [testng] [2025-03-06 01:43:57,395] [pool-1-thread-2] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2025-03-06 01:44:52,668] [pool-1-thread-5] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2025-03-06 01:44:59,341] [pool-1-thread-5] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2025-03-06 01:46:09,748] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2025-03-06 01:46:18,821] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2025-03-06 01:46:27,778] [pool-1-thread-5] Initializing /data/glen/Image0002.oif: [testng] [2025-03-06 01:47:02,213] [pool-1-thread-11] Initializing /data/glen/notsaturated.oif: [testng] [2025-03-06 01:53:24,763] [pool-1-thread-3] Initializing /data/francesco/fGfp.c15.oib: [testng] [2025-03-06 01:53:31,030] [pool-1-thread-3] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] 02:34:00,521 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:34:00,521 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:34:00,523 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-06_02-34-00.log] [testng] 02:34:00,523 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c8cff90 - End of configuration. [testng] 03:18:46,466 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 03:18:46,466 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:18:46,467 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-06_03-18-46.log] [testng] 03:18:46,468 |-INFO in ch.qos.logback.core.sift.SiftProcessor@306ac27f - End of configuration. [testng] 03:21:47,695 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 03:21:47,696 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:21:47,696 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-06_03-21-47.log] [testng] 03:21:47,696 |-INFO in ch.qos.logback.core.sift.SiftProcessor@64c9ccd1 - End of configuration. [testng] 03:40:27,518 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:40:27,518 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:40:27,519 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-06_03-40-27.log] [testng] 03:40:27,520 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71ef979e - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 170 minutes 35 seconds Finished: SUCCESS