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Started by upstream project "BIOFORMATS-test-repo" build number 41 originally caused by: Started by upstream project "Trigger" build number 47 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4 [BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins15210811656287263731.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_5841_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 02:28:07,992 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 02:28:07,994 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 02:28:07,994 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:28:07,996 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:28:07,996 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 02:28:07,996 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 02:28:07,996 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 02:28:07,996 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:28:07,997 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:28:07,997 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 02:28:07,997 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 02:28:07,997 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 02:28:08,263 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:28:08,264 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:28:08,299 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:28:08,299 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:28:08,309 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:28:08,310 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:28:08,310 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:28:08,310 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:28:08,310 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 02:28:08,311 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 02:28:08,312 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 314 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-04-22 02:28:08,326] [main] java.version = 1.8.0_342 [testng] 02:28:08,333 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:28:08,334 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:28:08,403 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-22_02-28-08.log] [testng] 02:28:08,405 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-04-22 02:28:08,407] [main] testng.directory = /data [testng] [2024-04-22 02:28:08,407] [main] testng.configDirectory = /config [testng] [2024-04-22 02:28:08,423] [main] testng.multiplier = 1.0 [testng] [2024-04-22 02:28:08,424] [main] testng.in-memory = false [testng] [2024-04-22 02:28:08,424] [main] testng.allow-missing = false [testng] [2024-04-22 02:28:08,424] [main] user.language = fr [testng] [2024-04-22 02:28:08,424] [main] user.country = FR [testng] [2024-04-22 02:28:08,424] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-04-22 02:29:10,481] [main] ---------------------------------------- [testng] [2024-04-22 02:29:10,481] [main] Total files: 15735 [testng] [2024-04-22 02:29:10,481] [main] Scan time: 62.057 s (3 ms/file) [testng] [2024-04-22 02:29:10,482] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-04-22 02:29:47,881] [pool-1-thread-1] Initializing /data/converted/converted/mri-stack.tif: [testng] 02:29:47,881 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:29:47,881 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:29:47,882 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-22_02-29-47.log] [testng] 02:29:47,883 |-INFO in ch.qos.logback.core.sift.SiftProcessor@11112447 - End of configuration. [testng] [2024-04-22 02:29:47,935] [pool-1-thread-12] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] 02:29:47,935 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:29:47,935 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:29:47,936 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-22_02-29-47.log] [testng] 02:29:47,937 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1490312e - End of configuration. [testng] [2024-04-22 02:29:48,012] [pool-1-thread-11] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] 02:29:48,012 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:29:48,012 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:29:48,013 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-22_02-29-48.log] [testng] 02:29:48,013 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6abba185 - End of configuration. [testng] [2024-04-22 02:29:48,204] [pool-1-thread-10] Initializing /data/converted/kelsey/432x342BW.tif: [testng] 02:29:48,204 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:29:48,204 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:29:48,205 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-22_02-29-48.log] [testng] 02:29:48,206 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15729cc5 - End of configuration. [testng] [2024-04-22 02:29:48,254] [pool-1-thread-9] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] 02:29:48,254 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:29:48,254 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:29:48,255 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-22_02-29-48.log] [testng] 02:29:48,255 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b0eadd4 - End of configuration. [testng] [2024-04-22 02:29:48,565] [pool-1-thread-8] Initializing /data/converted/converted/2chz.tif: [testng] 02:29:48,565 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:29:48,565 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:29:48,566 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-22_02-29-48.log] [testng] 02:29:48,566 |-INFO in ch.qos.logback.core.sift.SiftProcessor@62bec62e - End of configuration. [testng] [2024-04-22 02:29:48,650] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] 02:29:48,650 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:29:48,650 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:29:48,651 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-22_02-29-48.log] [testng] 02:29:48,651 |-INFO in ch.qos.logback.core.sift.SiftProcessor@443effdc - End of configuration. [testng] [2024-04-22 02:29:48,899] [pool-1-thread-6] Initializing /data/converted/dietmar/138.tif: [testng] 02:29:48,900 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:29:48,900 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:29:48,901 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-22_02-29-48.log] [testng] 02:29:48,901 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2308e5d0 - End of configuration. [testng] [2024-04-22 02:29:49,110] [pool-1-thread-5] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] 02:29:49,110 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:29:49,110 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:29:49,111 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-22_02-29-49.log] [testng] 02:29:49,111 |-INFO in ch.qos.logback.core.sift.SiftProcessor@402ba6ee - End of configuration. [testng] [2024-04-22 02:29:49,976] [pool-1-thread-4] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] 02:29:49,977 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:29:49,977 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:29:49,977 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-22_02-29-49.log] [testng] 02:29:49,978 |-INFO in ch.qos.logback.core.sift.SiftProcessor@43985898 - End of configuration. [testng] [2024-04-22 02:29:50,130] [pool-1-thread-3] Initializing /data/converted/kelsey/650x514BW.tif: [testng] 02:29:50,130 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:29:50,130 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:29:50,131 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-22_02-29-50.log] [testng] 02:29:50,131 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e8cd0c7 - End of configuration. [testng] [2024-04-22 02:29:50,182] [pool-1-thread-2] Initializing /data/converted/converted/damian.tif: [testng] 02:29:50,182 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:29:50,182 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:29:50,183 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-22_02-29-50.log] [testng] 02:29:50,183 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14e0e3b5 - End of configuration. [testng] [2024-04-22 02:29:50,235] [pool-1-thread-3] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:29:50,235] [pool-1-thread-1] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:29:50,235] [pool-1-thread-8] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:29:50,235] [pool-1-thread-10] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:29:50,262] [pool-1-thread-2] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:29:52,338] [pool-1-thread-1] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2024-04-22 02:29:52,396] [pool-1-thread-2] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2024-04-22 02:29:52,714] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2024-04-22 02:29:53,013] [pool-1-thread-3] Initializing /data/scott/Slide133-04.tif: [testng] [2024-04-22 02:29:53,199] [pool-1-thread-1] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:29:55,226] [pool-1-thread-1] Initializing /data/converted/karsten/Bild1.tif: [testng] [2024-04-22 02:29:55,307] [pool-1-thread-3] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:29:55,390] [pool-1-thread-12] Initializing /data/converted/darren/section0002_w1.tif: [testng] [2024-04-22 02:29:57,230] [pool-1-thread-1] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2024-04-22 02:29:58,817] [pool-1-thread-12] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:29:59,210] [pool-1-thread-8] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2024-04-22 02:30:04,222] [pool-1-thread-3] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2024-04-22 02:30:06,836] [pool-1-thread-12] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2024-04-22 02:30:07,249] [pool-1-thread-11] Initializing /data/scott/Slide133-11.tif: [testng] [2024-04-22 02:30:09,510] [pool-1-thread-11] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:30:09,954] [pool-1-thread-2] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] [2024-04-22 02:30:10,277] [pool-1-thread-12] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2024-04-22 02:30:10,979] [pool-1-thread-2] ExposureTimes: FAILED (Series 0 plane 1 channel 1 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:30:11,130] [pool-1-thread-4] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2024-04-22 02:30:11,185] [pool-1-thread-4] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:30:11,760] [pool-1-thread-4] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2024-04-22 02:30:12,238] [pool-1-thread-4] ExposureTimes: FAILED (Series 0 plane 1 channel 1 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:30:13,497] [pool-1-thread-2] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2024-04-22 02:30:14,080] [pool-1-thread-12] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2024-04-22 02:30:15,177] [pool-1-thread-2] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] [2024-04-22 02:30:15,932] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2024-04-22 02:30:24,523] [pool-1-thread-6] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] [2024-04-22 02:30:26,242] [pool-1-thread-6] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2024-04-22 02:30:26,405] [pool-1-thread-6] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:30:27,641] [pool-1-thread-6] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2024-04-22 02:30:29,173] [pool-1-thread-9] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2024-04-22 02:30:30,418] [pool-1-thread-6] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:30:32,323] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2024-04-22 02:30:36,462] [pool-1-thread-6] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2024-04-22 02:30:41,540] [pool-1-thread-10] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2024-04-22 02:30:43,183] [pool-1-thread-9] Initializing /data/othmar/mozaic.tif: [testng] [2024-04-22 02:30:43,362] [pool-1-thread-4] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2024-04-22 02:30:43,825] [pool-1-thread-4] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:30:44,528] [pool-1-thread-9] ExposureTimes: FAILED (Series 0 plane 1 channel 1 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:30:51,297] [pool-1-thread-3] Initializing /data/converted/othmar/z-stack.tif: [testng] [2024-04-22 02:30:52,159] [pool-1-thread-3] ExposureTimes: FAILED (Series 0 plane 1 channel 1 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:30:53,167] [pool-1-thread-12] Initializing /data/converted/sebastien/F1.tif: [testng] [2024-04-22 02:30:53,724] [pool-1-thread-12] ExposureTimes: FAILED (Series 0 plane 1 channel 1 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:31:00,935] [pool-1-thread-11] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] [2024-04-22 02:31:02,710] [pool-1-thread-11] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2024-04-22 02:31:06,561] [pool-1-thread-12] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2024-04-22 02:31:06,730] [pool-1-thread-12] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:31:07,670] [pool-1-thread-12] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2024-04-22 02:31:08,318] [pool-1-thread-9] Initializing /data/converted/dan/adultnr1.tif: [testng] [2024-04-22 02:31:10,893] [pool-1-thread-6] Initializing /data/scott/Slide133-01.tif: [testng] [2024-04-22 02:31:12,977] [pool-1-thread-6] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:31:18,150] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2024-04-22 02:31:18,378] [pool-1-thread-7] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2024-04-22 02:31:18,457] [pool-1-thread-7] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:31:19,452] [pool-1-thread-7] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2024-04-22 02:31:21,159] [pool-1-thread-9] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2024-04-22 02:31:21,465] [pool-1-thread-9] ExposureTimes: FAILED (Series 0 plane 1 channel 1 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:31:34,364] [pool-1-thread-11] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] [2024-04-22 02:31:35,354] [pool-1-thread-9] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2024-04-22 02:31:36,488] [pool-1-thread-11] Initializing /data/converted/vladan/vladan.tif: [testng] [2024-04-22 02:31:53,280] [pool-1-thread-6] Initializing /data/converted/karsten/Bild2.tif: [testng] [2024-04-22 02:31:53,316] [pool-1-thread-4] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2024-04-22 02:31:53,632] [pool-1-thread-4] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:31:54,250] [pool-1-thread-6] Initializing /data/converted/dietmar/137.tif: [testng] [2024-04-22 02:31:55,110] [pool-1-thread-4] Initializing /data/converted/converted/2chzt.tif: [testng] [2024-04-22 02:31:55,661] [pool-1-thread-4] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:32:01,942] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2024-04-22 02:32:04,772] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2024-04-22 02:32:19,191] [pool-1-thread-6] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2024-04-22 02:32:26,214] [pool-1-thread-3] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2024-04-22 02:32:38,026] [pool-1-thread-11] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2024-04-22 02:32:39,560] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2024-04-22 02:32:41,142] [pool-1-thread-3] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2024-04-22 02:32:48,099] [pool-1-thread-3] Initializing /data/converted/sebastien/test.tif: [testng] [2024-04-22 02:32:56,162] [pool-1-thread-6] Initializing /data/converted/stephan/notok2.tif: [testng] [2024-04-22 02:32:58,578] [pool-1-thread-2] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] [2024-04-22 02:33:02,144] [pool-1-thread-6] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2024-04-22 02:33:06,188] [pool-1-thread-11] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2024-04-22 02:33:08,769] [pool-1-thread-12] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2024-04-22 02:33:09,359] [pool-1-thread-6] Initializing /data/converted/michel/c.tif: [testng] [2024-04-22 02:33:11,143] [pool-1-thread-6] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2024-04-22 02:33:15,573] [pool-1-thread-10] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2024-04-22 02:33:16,257] [pool-1-thread-10] ExposureTimes: FAILED (Series 0 plane 1 channel 1 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:33:18,013] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2024-04-22 02:33:21,454] [pool-1-thread-3] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2024-04-22 02:33:23,186] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2024-04-22 02:33:32,500] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2024-04-22 02:33:44,990] [pool-1-thread-5] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2024-04-22 02:33:47,567] [pool-1-thread-5] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:33:52,072] [pool-1-thread-4] Initializing /data/converted/michel/e.tif: [testng] [2024-04-22 02:33:53,077] [pool-1-thread-10] Initializing /data/converted/nicolas/image.tif: [testng] [2024-04-22 02:33:53,291] [pool-1-thread-10] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:33:53,724] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2024-04-22 02:33:54,396] [pool-1-thread-4] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2024-04-22 02:33:54,557] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2024-04-22 02:33:54,844] [pool-1-thread-6] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2024-04-22 02:33:56,576] [pool-1-thread-5] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2024-04-22 02:33:57,416] [pool-1-thread-4] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2024-04-22 02:33:58,788] [pool-1-thread-5] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:34:00,535] [pool-1-thread-6] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2024-04-22 02:34:01,912] [pool-1-thread-4] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2024-04-22 02:34:02,699] [pool-1-thread-6] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:34:02,739] [pool-1-thread-3] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2024-04-22 02:34:03,267] [pool-1-thread-4] Initializing /data/converted/michel/a.tif: [testng] [2024-04-22 02:34:03,690] [pool-1-thread-4] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2024-04-22 02:34:04,300] [pool-1-thread-5] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2024-04-22 02:34:05,591] [pool-1-thread-3] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2024-04-22 02:34:05,645] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2024-04-22 02:34:05,957] [pool-1-thread-3] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:34:06,455] [pool-1-thread-3] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2024-04-22 02:34:08,043] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2024-04-22 02:34:08,678] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2024-04-22 02:34:09,325] [pool-1-thread-3] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2024-04-22 02:34:12,450] [pool-1-thread-11] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] [2024-04-22 02:34:12,758] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2024-04-22 02:34:13,226] [pool-1-thread-11] ExposureTimes: FAILED (Series 0 plane 1 channel 1 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:34:14,508] [pool-1-thread-11] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2024-04-22 02:34:26,888] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2024-04-22 02:34:32,305] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2024-04-22 02:34:36,692] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2024-04-22 02:34:39,999] [pool-1-thread-5] Initializing /data/converted/michel/b.tif: [testng] [2024-04-22 02:34:40,435] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2024-04-22 02:34:41,741] [pool-1-thread-5] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2024-04-22 02:34:44,738] [pool-1-thread-5] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:34:47,517] [pool-1-thread-9] Initializing /data/converted/michel/d.tif: [testng] [2024-04-22 02:34:48,583] [pool-1-thread-9] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2024-04-22 02:34:48,780] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2024-04-22 02:34:49,276] [pool-1-thread-9] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:34:50,384] [pool-1-thread-2] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2024-04-22 02:34:50,870] [pool-1-thread-9] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2024-04-22 02:34:51,670] [pool-1-thread-9] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] [2024-04-22 02:34:53,412] [pool-1-thread-2] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:34:53,461] [pool-1-thread-3] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2024-04-22 02:34:54,049] [pool-1-thread-5] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] [2024-04-22 02:34:58,241] [pool-1-thread-3] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2024-04-22 02:35:02,111] [pool-1-thread-2] Initializing /data/converted/stephan/notok1.tif: [testng] [2024-04-22 02:35:04,674] [pool-1-thread-11] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2024-04-22 02:35:05,883] [pool-1-thread-11] Initializing /data/scott/Slide133-08.tif: [testng] [2024-04-22 02:35:07,893] [pool-1-thread-8] Initializing /data/converted/othmar/mozaic.tif: [testng] [2024-04-22 02:35:08,152] [pool-1-thread-11] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [2024-04-22 02:35:08,482] [pool-1-thread-2] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2024-04-22 02:35:08,898] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2024-04-22 02:35:09,900] [pool-1-thread-3] Initializing /data/converted/lior/live+cf5b.tif: [testng] [2024-04-22 02:35:10,706] [pool-1-thread-8] ExposureTimes: FAILED (Series 0 plane 1 channel 1 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double)) [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 36, Skips: 0 [testng] =============================================== [testng] [testng] The tests failed. BUILD FAILED /bio-formats-build/bioformats/components/test-suite/build.xml:270: if=failedTest Total time: 15 minutes 20 seconds Build step 'Execute shell' marked build as failure Finished: FAILURE