Skip to content

Console Output

Started by upstream project "BIOFORMATS-test-repo" build number 367
originally caused by:
 Started by upstream project "Trigger" build number 393
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7
[BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins12864334927877518703.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_58469_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test

test-automated:
   [testng] File leak detector installed
   [testng] 00:24:31,304 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15
   [testng] 00:24:31,306 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - No custom configurators were discovered as a service.
   [testng] 00:24:31,306 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 00:24:31,307 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 00:24:31,307 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 00:24:31,307 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 00:24:31,308 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 00:24:31,308 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 00:24:31,308 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 00:24:31,308 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 00:24:31,309 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 00:24:31,309 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 00:24:31,540 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 00:24:31,540 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 00:24:31,569 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 00:24:31,569 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 00:24:31,577 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 00:24:31,578 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 00:24:31,578 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 00:24:31,578 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 00:24:31,578 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@63355449 - End of configuration.
   [testng] 00:24:31,579 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48ae9b55 - Registering current configuration as safe fallback point
   [testng] 00:24:31,579 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 271 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2025-03-07 00:24:31,589] [main] java.version = 1.8.0_342
   [testng] 00:24:31,593 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 00:24:31,593 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:24:31,639 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-07_00-24-31.log]
   [testng] 00:24:31,640 |-INFO in ch.qos.logback.core.sift.SiftProcessor@765d7657 - End of configuration.
   [testng] [2025-03-07 00:24:31,642] [main] testng.directory = /data
   [testng] [2025-03-07 00:24:31,643] [main] testng.configDirectory = /config
   [testng] [2025-03-07 00:24:31,654] [main] testng.multiplier = 1.0
   [testng] [2025-03-07 00:24:31,655] [main] testng.in-memory = false
   [testng] [2025-03-07 00:24:31,655] [main] testng.allow-missing = false
   [testng] [2025-03-07 00:24:31,655] [main] user.language = en
   [testng] [2025-03-07 00:24:31,655] [main] user.country = ${user.country}
   [testng] [2025-03-07 00:24:31,655] [main] Maximum heap size = 13653 MB
   [testng] Scanning for files...
   [testng] [2025-03-07 00:25:05,747] [main] ----------------------------------------
   [testng] [2025-03-07 00:25:05,747] [main] Total files: 320
   [testng] [2025-03-07 00:25:05,747] [main] Scan time: 34.092 s (106 ms/file)
   [testng] [2025-03-07 00:25:05,747] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 196 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2025-03-07 00:41:41,321] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir: 
   [testng] 00:41:41,322 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 00:41:41,322 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:41:41,323 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-07_00-41-41.log]
   [testng] 00:41:41,324 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f42e5d9 - End of configuration.
   [testng] [2025-03-07 00:41:42,463] [pool-1-thread-12] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir: 
   [testng] 00:41:42,463 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 00:41:42,463 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:41:42,464 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-07_00-41-42.log]
   [testng] 00:41:42,465 |-INFO in ch.qos.logback.core.sift.SiftProcessor@337801db - End of configuration.
   [testng] [2025-03-07 00:41:43,381] [pool-1-thread-11] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_22Lambda-420-630-w10nm-s10nm.oir: 
   [testng] 00:41:43,381 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 00:41:43,381 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:41:43,382 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-07_00-41-43.log]
   [testng] 00:41:43,382 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3413f8a6 - End of configuration.
   [testng] [2025-03-07 00:41:44,645] [pool-1-thread-10] Initializing /data/olympus/calcium sparks_XYt.vsi: 
   [testng] 00:41:44,645 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 00:41:44,645 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:41:44,646 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-07_00-41-44.log]
   [testng] 00:41:44,646 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41951d46 - End of configuration.
   [testng] [2025-03-07 00:41:45,945] [pool-1-thread-9] Initializing /data/qa-17335/Clipboard-OSR-Z.tif: 
   [testng] 00:41:45,946 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 00:41:45,946 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:41:45,946 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-07_00-41-45.log]
   [testng] 00:41:45,947 |-INFO in ch.qos.logback.core.sift.SiftProcessor@29fb94ac - End of configuration.
   [testng] [2025-03-07 00:41:49,196] [pool-1-thread-8] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir: 
   [testng] 00:41:49,196 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 00:41:49,196 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:41:49,197 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-07_00-41-49.log]
   [testng] 00:41:49,197 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e669fa6 - End of configuration.
   [testng] [2025-03-07 00:41:50,513] [pool-1-thread-7] Initializing /data/qa-17919/f10187.oir: 
   [testng] 00:41:50,513 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 00:41:50,513 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:41:50,513 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-07_00-41-50.log]
   [testng] 00:41:50,514 |-INFO in ch.qos.logback.core.sift.SiftProcessor@69f0005c - End of configuration.
   [testng] [2025-03-07 00:42:11,229] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi: 
   [testng] 00:42:11,230 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 00:42:11,230 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:42:11,230 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-07_00-42-11.log]
   [testng] 00:42:11,231 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4142accf - End of configuration.
   [testng] [2025-03-07 00:42:12,332] [pool-1-thread-5] Initializing /data/qa-17270/Clipboard-image1.tif: 
   [testng] 00:42:12,332 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 00:42:12,332 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:42:12,333 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-07_00-42-12.log]
   [testng] 00:42:12,334 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4959c8d7 - End of configuration.
   [testng] [2025-03-07 00:42:15,175] [pool-1-thread-4] Initializing /data/qa-16881/P10-50 D2.ome.tif: 
   [testng] 00:42:15,175 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 00:42:15,175 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:42:15,175 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-07_00-42-15.log]
   [testng] 00:42:15,176 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5398ecb7 - End of configuration.
   [testng] [2025-03-07 00:42:17,132] [pool-1-thread-3] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif: 
   [testng] 00:42:17,132 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 00:42:17,132 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:42:17,133 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-07_00-42-17.log]
   [testng] 00:42:17,133 |-INFO in ch.qos.logback.core.sift.SiftProcessor@59271ee - End of configuration.
   [testng] [2025-03-07 00:42:18,565] [pool-1-thread-2] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif: 
   [testng] 00:42:18,565 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 00:42:18,565 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:42:18,566 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-07_00-42-18.log]
   [testng] 00:42:18,566 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a8643b8 - End of configuration.
   [testng] [2025-03-07 00:42:26,982] [pool-1-thread-6] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: 
   [testng] [2025-03-07 00:42:28,065] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir: 
   [testng] [2025-03-07 00:42:28,979] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: 
   [testng] [2025-03-07 00:42:29,724] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif: 
   [testng] [2025-03-07 00:42:34,652] [pool-1-thread-3] Initializing /data/qa-16881/P10D1 20150729_0019.oir: 
   [testng] [2025-03-07 00:42:36,625] [pool-1-thread-8] Initializing /data/olympus/Stitched_XYZ.vsi: 
   [testng] [2025-03-07 00:42:37,882] [pool-1-thread-9] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.vsi: 
   [testng] [2025-03-07 00:42:39,013] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: 
   [testng] [2025-03-07 00:42:41,175] [pool-1-thread-5] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: 
   [testng] [2025-03-07 00:42:44,723] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif: 
   [testng] [2025-03-07 00:42:57,441] [pool-1-thread-8] Initializing /data/olympus/XYZt.ome.tif: 
   [testng] [2025-03-07 00:43:00,068] [pool-1-thread-10] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir: 
   [testng] [2025-03-07 00:43:02,529] [pool-1-thread-9] Initializing /data/qa-17335/OSR-Z.ome.tif: 
   [testng] [2025-03-07 00:43:04,536] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: 
   [testng] [2025-03-07 00:43:07,512] [pool-1-thread-2] Initializing /data/qa-17270/stack1.oir: 
   [testng] [2025-03-07 00:43:14,766] [pool-1-thread-1] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif: 
   [testng] [2025-03-07 00:43:17,648] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: 
   [testng] [2025-03-07 00:43:28,348] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: 
   [testng] [2025-03-07 00:43:30,776] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir: 
   [testng] [2025-03-07 00:43:39,929] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir: 
   [testng] [2025-03-07 00:43:41,238] [pool-1-thread-9] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: 
   [testng] [2025-03-07 00:43:52,737] [pool-1-thread-8] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: 
   [testng] [2025-03-07 00:43:53,855] [pool-1-thread-4] Initializing /data/qa-17293/Clipboard.tif: 
   [testng] [2025-03-07 00:43:55,530] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir: 
   [testng] [2025-03-07 00:43:56,171] [pool-1-thread-5] Initializing /data/qa-17331/60x zstack RS.oir: 
   [testng] [2025-03-07 00:44:00,480] [pool-1-thread-3] Initializing /data/qa-17335/1.ome.tif: 
   [testng] [2025-03-07 00:44:05,565] [pool-1-thread-8] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir: 
   [testng] [2025-03-07 00:45:18,735] [pool-1-thread-6] Initializing /data/qa-16871/Clipboard.tif: 
   [testng] [2025-03-07 00:45:21,017] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif: 
   [testng] [2025-03-07 00:45:23,247] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif: 
   [testng] [2025-03-07 00:45:24,592] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/zebra shg.oir: 
   [testng] [2025-03-07 00:45:32,913] [pool-1-thread-5] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: 
   [testng] [2025-03-07 00:45:36,679] [pool-1-thread-3] Initializing /data/public/etienne/coupe shg stack_0001.oir: 
   [testng] [2025-03-07 00:45:39,712] [pool-1-thread-1] Initializing /data/qa-17270/image1.ome.tif: 
   [testng] [2025-03-07 00:45:47,005] [pool-1-thread-11] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: 
   [testng] [2025-03-07 00:45:49,614] [pool-1-thread-6] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: 
   [testng] [2025-03-07 00:46:00,863] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: 
   [testng] [2025-03-07 00:46:09,217] [pool-1-thread-11] Initializing /data/public/imagesc-105684/1202-interval_30sec_sequence_frame.oir: 
   [testng] [2025-03-07 00:46:11,526] [pool-1-thread-1] Initializing /data/olympus/XYZt.oir: 
   [testng] [2025-03-07 00:46:20,133] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif: 
   [testng] [2025-03-07 00:46:22,840] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif: 
   [testng] [2025-03-07 00:46:29,691] [pool-1-thread-3] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif: 
   [testng] [2025-03-07 00:46:33,387] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: 
   [testng] [2025-03-07 00:46:34,776] [pool-1-thread-2] Initializing /data/public/etienne/Clipboard-venus stack.tif: 
   [testng] [2025-03-07 00:46:38,390] [pool-1-thread-12] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir: 
   [testng] [2025-03-07 00:46:47,948] [pool-1-thread-5] Initializing /data/olympus/XYZt.vsi: 
   [testng] [2025-03-07 00:46:49,398] [pool-1-thread-10] Initializing /data/qa-17270/stack1.ome.tif: 
   [testng] [2025-03-07 00:46:51,957] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: 
   [testng] [2025-03-07 00:46:55,633] [pool-1-thread-5] Initializing /data/qa-17331/60x zstack RS.ome.tif: 
   [testng] [2025-03-07 00:46:56,866] [pool-1-thread-12] Initializing /data/cudmore/20190401__0005.oir: 
   [testng] [2025-03-07 00:47:11,100] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: 
   [testng] [2025-03-07 00:47:12,583] [pool-1-thread-2] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir: 
   [testng] [2025-03-07 00:47:17,024] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif: 
   [testng] [2025-03-07 00:47:19,502] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: 
   [testng] [2025-03-07 00:47:21,346] [pool-1-thread-10] Initializing /data/olympus/Stitched_XYZ.ome.tif: 
   [testng] [2025-03-07 00:47:29,329] [pool-1-thread-5] Initializing /data/olympus/40X_4CH_XY.vsi: 
   [testng] [2025-03-07 00:47:30,343] [pool-1-thread-3] Initializing /data/qa-16881/P10D1 20150729.ome.tif: 
   [testng] [2025-03-07 00:47:33,882] [pool-1-thread-2] Initializing /data/qa-16881/P10-50 D2.oir: 
   [testng] [2025-03-07 00:47:38,114] [pool-1-thread-11] Initializing /data/olympus/spectral_scan_XYL.oir: 
   [testng] [2025-03-07 00:47:45,721] [pool-1-thread-10] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: 
   [testng] [2025-03-07 00:47:49,353] [pool-1-thread-6] Initializing /data/public/imagesc-105684/1202-interval_30sec_sequence_frame_z stack.oir: 
   [testng] [2025-03-07 00:47:53,002] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: 
   [testng] [2025-03-07 00:47:57,876] [pool-1-thread-3] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif: 
   [testng] [2025-03-07 00:48:06,518] [pool-1-thread-2] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif: 
   [testng] [2025-03-07 00:48:16,752] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif: 
   [testng] [2025-03-07 00:48:18,004] [pool-1-thread-3] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif: 
   [testng] [2025-03-07 00:48:21,642] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: 
   [testng] [2025-03-07 00:48:25,034] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: 
   [testng] [2025-03-07 00:48:30,767] [pool-1-thread-5] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif: 
   [testng] [2025-03-07 00:48:32,731] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: 
   [testng] [2025-03-07 00:48:34,533] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: 
   [testng] [2025-03-07 00:48:36,067] [pool-1-thread-3] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif: 
   [testng] [2025-03-07 00:48:42,358] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif: 
   [testng] [2025-03-07 00:48:44,940] [pool-1-thread-9] Initializing /data/qa-17409/Stitch_A01_G001.oir: 
   [testng] [2025-03-07 00:48:53,865] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: 
   [testng] [2025-03-07 00:48:56,884] [pool-1-thread-6] Initializing /data/public/gh-4205/zenodo-13680725/matl.omp2info: 
   [testng] [2025-03-07 00:49:21,479] [pool-1-thread-1] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: 
   [testng] [2025-03-07 00:49:27,316] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif: 
   [testng] [2025-03-07 00:49:28,855] [pool-1-thread-3] Initializing /data/qa-16871/XY_0003.oir: 
   [testng] [2025-03-07 00:49:34,109] [pool-1-thread-10] Initializing /data/qa-17335/stimulation_0001_LSM.oir: 
   [testng] [2025-03-07 00:49:43,793] [pool-1-thread-11] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: 
   [testng] [2025-03-07 00:49:47,641] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif: 
   [testng] [2025-03-07 00:49:51,882] [pool-1-thread-3] Initializing /data/qa-17335/1.oir: 
   [testng] [2025-03-07 00:49:55,291] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif: 
   [testng] [2025-03-07 00:49:57,873] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif: 
   [testng] [2025-03-07 00:50:00,766] [pool-1-thread-9] Initializing /data/qa-17409/Clipboard.tif: 
   [testng] [2025-03-07 00:50:04,640] [pool-1-thread-3] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: 
   [testng] [2025-03-07 00:50:08,985] [pool-1-thread-10] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: 
   [testng] [2025-03-07 00:50:11,137] [pool-1-thread-2] Initializing /data/olympus/Stitched_XYZ.oir: 
   [testng] [2025-03-07 00:50:13,250] [pool-1-thread-5] Initializing /data/public/gh-4205/zenodo-13680725/Stitch_A01_G001.oir: 
   [testng] [2025-03-07 00:50:17,367] [pool-1-thread-11] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: 
   [testng] [2025-03-07 00:50:20,962] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif: 
   [testng] [2025-03-07 00:50:25,413] [pool-1-thread-12] Initializing /data/qa-17270/Clipboard-stack1.tif: 
   [testng] [2025-03-07 00:50:29,976] [pool-1-thread-3] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: 
   [testng] [2025-03-07 00:50:36,320] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: 
   [testng] [2025-03-07 00:50:43,117] [pool-1-thread-11] Initializing /data/olympus/2017-04-20/Clipboard.tif: 
   [testng] [2025-03-07 00:50:45,925] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir: 
   [testng] [2025-03-07 00:50:48,715] [pool-1-thread-7] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: 
   [testng] [2025-03-07 00:50:49,757] [pool-1-thread-9] Initializing /data/qa-16881/P10D1 20150729_0024.oir: 
   [testng] [2025-03-07 00:50:51,022] [pool-1-thread-12] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif: 
   [testng] [2025-03-07 00:50:52,708] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: 
   [testng] [2025-03-07 00:51:06,433] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: 
   [testng] [2025-03-07 00:51:08,889] [pool-1-thread-10] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: 
   [testng] [2025-03-07 00:51:12,157] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: 
   [testng] [2025-03-07 00:51:14,397] [pool-1-thread-11] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: 
   [testng] [2025-03-07 00:51:14,464] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif: 
   [testng] [2025-03-07 00:51:16,659] [pool-1-thread-9] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif: 
   [testng] [2025-03-07 00:51:18,257] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/Clipboard.tif: 
   [testng] [2025-03-07 00:51:21,821] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif: 
   [testng] [2025-03-07 00:51:24,771] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif: 
   [testng] [2025-03-07 00:51:27,824] [pool-1-thread-9] Initializing /data/qa-17270/alexa488.oir: 
   [testng] [2025-03-07 00:51:30,543] [pool-1-thread-5] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info: 
   [testng] [2025-03-07 00:51:37,408] [pool-1-thread-7] Initializing /data/qa-21508/Stitch_A01_G008.oir: 
   [testng] [2025-03-07 00:51:38,283] [pool-1-thread-11] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir: 
   [testng] [2025-03-07 00:51:44,570] [pool-1-thread-2] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir: 
   [testng] [2025-03-07 00:51:50,155] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif: 
   [testng] [2025-03-07 00:52:06,352] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: 
   [testng] [2025-03-07 00:52:12,747] [pool-1-thread-10] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir: 
   [testng] [2025-03-07 00:52:17,423] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2_0019.oir: 
   [testng] [2025-03-07 00:52:21,656] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif: 
   [testng] [2025-03-07 00:52:25,871] [pool-1-thread-7] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir: 
   [testng] [2025-03-07 00:52:30,104] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif: 
   [testng] [2025-03-07 00:52:37,072] [pool-1-thread-11] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: 
   [testng] [2025-03-07 00:52:40,515] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: 
   [testng] [2025-03-07 00:52:48,562] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif: 
   [testng] [2025-03-07 00:52:50,018] [pool-1-thread-12] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif: 
   [testng] [2025-03-07 00:52:54,597] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: 
   [testng] [2025-03-07 00:52:58,148] [pool-1-thread-12] Initializing /data/olympus/Clipboard-XYZt.tif: 
   [testng] [2025-03-07 00:53:00,526] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir: 
   [testng] [2025-03-07 00:53:06,075] [pool-1-thread-2] Initializing /data/qa-17331/Clipboard.tif: 
   [testng] [2025-03-07 00:53:09,024] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: 
   [testng] [2025-03-07 00:53:09,935] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir: 
   [testng] [2025-03-07 00:53:18,766] [pool-1-thread-2] Initializing /data/olympus/40X_4CH_XY.ome.tif: 
   [testng] [2025-03-07 00:53:20,211] [pool-1-thread-9] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: 
   [testng] [2025-03-07 00:53:21,963] [pool-1-thread-11] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: 
   [testng] [2025-03-07 00:53:23,577] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif: 
   [testng] [2025-03-07 00:53:27,085] [pool-1-thread-12] Initializing /data/qa-17270/image1.oir: 
   [testng] [2025-03-07 00:53:32,627] [pool-1-thread-2] Initializing /data/qa-17917/f10010.oir: 
   [testng] [2025-03-07 00:54:34,240] [pool-1-thread-3] Initializing /data/qa-16881/P10-50 D2_0006.oir: 
   [testng] [2025-03-07 00:54:35,350] [pool-1-thread-9] Initializing /data/public/imagesc-105684/1202-interval_freeRun_sequence_frame.oir: 
   [testng] [2025-03-07 00:54:37,183] [pool-1-thread-11] Initializing /data/qa-17335/OSR-Z.oir: 
   [testng] [2025-03-07 00:54:44,083] [pool-1-thread-7] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif: 
   [testng] [2025-03-07 00:54:48,873] [pool-1-thread-7] Initializing /data/olympus/spectral_scan_XYL.ome.tif: 
   [testng] [2025-03-07 00:54:50,187] [pool-1-thread-11] Initializing /data/qa-17270/alexa488.ome.tif: 
   [testng] [2025-03-07 00:54:51,286] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir: 
   [testng] [2025-03-07 00:55:00,405] [pool-1-thread-4] Initializing /data/public/etienne/venus stack.ome.tif: 
   [testng] [2025-03-07 00:55:01,266] [pool-1-thread-11] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: 
   [testng] [2025-03-07 00:55:03,595] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif: 
   [testng] [2025-03-07 00:55:06,437] [pool-1-thread-9] Initializing /data/olympus/40X_4CH_XY.oir: 
   [testng] [2025-03-07 00:55:11,795] [pool-1-thread-4] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info: 
   [testng] [2025-03-07 00:55:21,354] [pool-1-thread-11] Initializing /data/public/etienne/amy slice z stack_0001.oir: 
   [testng] [2025-03-07 00:55:22,291] [pool-1-thread-7] Initializing /data/olympus/calcium sparks.jpg: 
   [testng] [2025-03-07 00:55:23,960] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif: 
   [testng] [2025-03-07 00:55:27,759] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: 
   [testng] [2025-03-07 00:55:34,553] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: 
   [testng] [2025-03-07 00:55:35,366] [pool-1-thread-11] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: 
   [testng] [2025-03-07 00:55:40,571] [pool-1-thread-3] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_4Z_5Lambda-420-630-w10nm-s50nm.oir: 
   [testng] [2025-03-07 00:55:43,202] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif: 
   [testng] [2025-03-07 00:55:43,897] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir: 
   [testng] [2025-03-07 00:55:48,632] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: 
   [testng] [2025-03-07 00:55:49,924] [pool-1-thread-11] Initializing /data/olympus/calcium sparks_XYt.ome.tif: 
   [testng] [2025-03-07 00:55:56,082] [pool-1-thread-10] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif: 
   [testng] [2025-03-07 00:55:56,587] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: 
   [testng] [2025-03-07 00:55:57,377] [pool-1-thread-7] Initializing /data/qa-16871/XY_0003.ome.tif: 
   [testng] [2025-03-07 00:56:00,857] [pool-1-thread-12] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_4T_5Lambda-420-630-w10nm-s50nm.oir: 
   [testng] [2025-03-07 00:56:02,515] [pool-1-thread-7] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif: 
   [testng] [2025-03-07 00:56:03,081] [pool-1-thread-3] Initializing /data/qa-17270/Clipboard-alexa488.tif: 
   [testng] [2025-03-07 00:56:03,957] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: 
   [testng] [2025-03-07 00:56:04,684] [pool-1-thread-11] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif: 
   [testng] [2025-03-07 00:56:07,899] [pool-1-thread-7] Initializing /data/qa-16881/P10D1 20150729.oir: 
   [testng] [2025-03-07 00:56:09,759] [pool-1-thread-11] Initializing /data/olympus/calcium sparks_XYt.oir: 
   [testng] [2025-03-07 00:56:12,824] [pool-1-thread-10] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info: 
   [testng] [2025-03-07 00:56:13,221] [pool-1-thread-3] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: 
   [testng] [2025-03-07 00:56:14,849] [pool-1-thread-9] Initializing /data/public/gh-4205/zenodo-12773657/DAPI-mCherry_3T_4Z_5Lambda-420-630-w10nm-s50nm.oir: 
   [testng] [2025-03-07 00:56:25,537] [pool-1-thread-7] Initializing /data/public/imagesc-105684/1202-interval_10sec_sequence_frame.oir: 
   [testng] [2025-03-07 00:56:27,398] [pool-1-thread-3] Initializing /data/public/etienne/venus stack.oir: 
   [testng] [2025-03-07 00:56:33,157] [pool-1-thread-12] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif: 
   [testng] [2025-03-07 00:56:39,113] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: 
   [testng] [2025-03-07 00:56:44,876] [pool-1-thread-11] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: 
   [testng] [2025-03-07 00:56:53,569] [pool-1-thread-12] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir: 
   [testng] [2025-03-07 00:57:02,454] [pool-1-thread-7] Initializing /data/qa-17335/Clipboard-1.tif: 
   [testng] [2025-03-07 00:57:15,964] [pool-1-thread-9] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: 
   [testng] [2025-03-07 00:57:17,287] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: 
   [testng] [2025-03-07 00:57:23,118] [pool-1-thread-3] Initializing /data/qa-17922/example_multipart.oir: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 10388, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 73 minutes 14 seconds
Finished: SUCCESS