![[Jenkins]](/jenkins/static/9bac06d9/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 367 originally caused by: Started by upstream project "Trigger" build number 393 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4 [BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins15591815998211562638.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_58500_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:01:20,470 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 01:01:20,471 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - No custom configurators were discovered as a service. [testng] 01:01:20,472 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:01:20,473 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:01:20,473 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:01:20,473 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:01:20,473 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:01:20,473 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:01:20,474 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:01:20,474 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:01:20,474 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:01:20,474 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:01:20,699 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:01:20,699 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:01:20,729 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:01:20,729 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:01:20,737 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:01:20,737 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:01:20,737 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:01:20,738 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:01:20,738 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@63355449 - End of configuration. [testng] 01:01:20,739 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48ae9b55 - Registering current configuration as safe fallback point [testng] 01:01:20,739 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 265 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-07 01:01:20,749] [main] java.version = 1.8.0_342 [testng] 01:01:20,752 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:01:20,752 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:01:20,796 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-07_01-01-20.log] [testng] 01:01:20,798 |-INFO in ch.qos.logback.core.sift.SiftProcessor@765d7657 - End of configuration. [testng] [2025-03-07 01:01:20,799] [main] testng.directory = /data [testng] [2025-03-07 01:01:20,800] [main] testng.configDirectory = /config [testng] [2025-03-07 01:01:20,812] [main] testng.multiplier = 1.0 [testng] [2025-03-07 01:01:20,813] [main] testng.in-memory = false [testng] [2025-03-07 01:01:20,813] [main] testng.allow-missing = false [testng] [2025-03-07 01:01:20,813] [main] user.language = en [testng] [2025-03-07 01:01:20,813] [main] user.country = ${user.country} [testng] [2025-03-07 01:01:20,813] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2025-03-07 01:02:08,370] [main] ---------------------------------------- [testng] [2025-03-07 01:02:08,370] [main] Total files: 259 [testng] [2025-03-07 01:02:08,370] [main] Scan time: 47.557 s (183 ms/file) [testng] [2025-03-07 01:02:08,370] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-07 01:13:13,767] [pool-1-thread-1] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] 01:13:13,768 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:13:13,768 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:13:13,769 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-07_01-13-13.log] [testng] 01:13:13,769 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b8e04cd - End of configuration. [testng] [2025-03-07 01:13:15,859] [pool-1-thread-12] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] 01:13:15,859 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:13:15,859 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:13:15,860 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-07_01-13-15.log] [testng] 01:13:15,860 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c76e8e2 - End of configuration. [testng] [2025-03-07 01:13:16,391] [pool-1-thread-11] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] 01:13:16,391 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:13:16,391 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:13:16,392 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-07_01-13-16.log] [testng] 01:13:16,392 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71d02630 - End of configuration. [testng] [2025-03-07 01:13:23,436] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] 01:13:23,436 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:13:23,436 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:13:23,437 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-07_01-13-23.log] [testng] 01:13:23,438 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c76fcc9 - End of configuration. [testng] [2025-03-07 01:13:24,995] [pool-1-thread-9] Initializing /data/pedro/plv-test.oib: [testng] 01:13:24,995 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:13:24,995 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:13:24,996 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-07_01-13-24.log] [testng] 01:13:24,996 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b5dcf3a - End of configuration. [testng] [2025-03-07 01:13:25,500] [pool-1-thread-8] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] 01:13:25,500 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:13:25,500 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:13:25,501 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-07_01-13-25.log] [testng] 01:13:25,501 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b74bc18 - End of configuration. [testng] [2025-03-07 01:13:26,070] [pool-1-thread-7] Initializing /data/molly/11OCT4.OIF: [testng] 01:13:26,070 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:13:26,070 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:13:26,071 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-07_01-13-26.log] [testng] 01:13:26,071 |-INFO in ch.qos.logback.core.sift.SiftProcessor@22298285 - End of configuration. [testng] [2025-03-07 01:13:36,944] [pool-1-thread-6] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] 01:13:36,944 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:13:36,944 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:13:36,945 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-07_01-13-36.log] [testng] 01:13:36,945 |-INFO in ch.qos.logback.core.sift.SiftProcessor@20e4947e - End of configuration. [testng] [2025-03-07 01:13:37,564] [pool-1-thread-5] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] 01:13:37,564 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:13:37,564 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:13:37,564 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-07_01-13-37.log] [testng] 01:13:37,565 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2615d504 - End of configuration. [testng] [2025-03-07 01:13:38,280] [pool-1-thread-4] Initializing /data/molly/11OCT5.OIF: [testng] 01:13:38,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:13:38,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:13:38,280 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-07_01-13-38.log] [testng] 01:13:38,281 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f34d5ad - End of configuration. [testng] [2025-03-07 01:13:50,219] [pool-1-thread-3] Initializing /data/glen/Null file/test no change.oif: [testng] 01:13:50,220 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:13:50,220 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:13:50,220 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-07_01-13-50.log] [testng] 01:13:50,221 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14dc562b - End of configuration. [testng] [2025-03-07 01:13:50,947] [pool-1-thread-2] Initializing /data/sten/01.oib: [testng] 01:13:50,947 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:13:50,947 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:13:50,948 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-07_01-13-50.log] [testng] 01:13:50,948 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4605fc2e - End of configuration. [testng] [2025-03-07 01:13:57,347] [pool-1-thread-12] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2025-03-07 01:13:57,508] [pool-1-thread-9] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2025-03-07 01:13:58,395] [pool-1-thread-8] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2025-03-07 01:14:01,248] [pool-1-thread-2] Initializing /data/glen/seqlinestack.oif: [testng] [2025-03-07 01:14:08,778] [pool-1-thread-6] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2025-03-07 01:14:10,527] [pool-1-thread-10] Initializing /data/johannes/step5b.bmp: [testng] [2025-03-07 01:14:12,012] [pool-1-thread-12] Initializing /data/michael/CELL3.oib: [testng] [2025-03-07 01:14:14,486] [pool-1-thread-10] Initializing /data/brian/Lambda10nm.oib: [testng] [2025-03-07 01:14:17,361] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2025-03-07 01:14:20,511] [pool-1-thread-12] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2025-03-07 01:14:23,494] [pool-1-thread-10] Initializing /data/molly/11OCT3.OIF: [testng] [2025-03-07 01:15:21,616] [pool-1-thread-6] Initializing /data/glen/simulstack.oib: [testng] [2025-03-07 01:15:23,015] [pool-1-thread-12] Initializing /data/molly/11OCT6.OIF: [testng] [2025-03-07 01:15:38,070] [pool-1-thread-3] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2025-03-07 01:15:38,633] [pool-1-thread-5] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2025-03-07 01:15:43,000] [pool-1-thread-6] Initializing /data/glen/singleseqline.oib: [testng] [2025-03-07 01:15:43,761] [pool-1-thread-9] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2025-03-07 01:15:45,703] [pool-1-thread-3] Initializing /data/monica/Image0056.oif: [testng] [2025-03-07 01:15:46,824] [pool-1-thread-5] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2025-03-07 01:15:49,909] [pool-1-thread-6] Initializing /data/francesco/fGfp.c15.oib: [testng] [2025-03-07 01:15:52,896] [pool-1-thread-5] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2025-03-07 01:15:57,949] [pool-1-thread-9] Initializing /data/brian/PA-GFP-3.oib: [testng] [2025-03-07 01:16:00,751] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2025-03-07 01:16:06,541] [pool-1-thread-9] Initializing /data/glen/111407.oif: [testng] [2025-03-07 01:16:11,312] [pool-1-thread-6] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2025-03-07 01:16:32,809] [pool-1-thread-5] Initializing /data/glen/singleseqframe.oif: [testng] [2025-03-07 01:16:45,464] [pool-1-thread-3] Initializing /data/glen/notsaturated.oif: [testng] [2025-03-07 01:17:36,210] [pool-1-thread-5] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2025-03-07 01:17:44,780] [pool-1-thread-5] Initializing /data/brian/CFP-GFP2.oib: [testng] [2025-03-07 01:17:51,451] [pool-1-thread-5] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2025-03-07 01:17:57,332] [pool-1-thread-5] Initializing /data/glen/Image0002.oif: [testng] [2025-03-07 01:24:49,657] [pool-1-thread-8] Initializing /data/glen/singleseqframe.oib: [testng] [2025-03-07 01:25:00,646] [pool-1-thread-8] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2025-03-07 01:25:10,748] [pool-1-thread-8] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2025-03-07 01:27:56,379] [pool-1-thread-1] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2025-03-07 01:28:05,720] [pool-1-thread-1] Initializing /data/marc/V0606J.oib: [testng] [2025-03-07 01:28:25,617] [pool-1-thread-1] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] [2025-03-07 01:29:09,121] [pool-1-thread-3] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2025-03-07 01:29:12,445] [pool-1-thread-3] Initializing /data/tom/zseries-test.oib: [testng] [2025-03-07 01:29:24,252] [pool-1-thread-3] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2025-03-07 01:29:33,689] [pool-1-thread-3] Initializing /data/yasunori/series_1.oib: [testng] [2025-03-07 01:29:42,687] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2025-03-07 01:29:53,133] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2025-03-07 01:30:00,849] [pool-1-thread-1] Initializing /data/johannes/step2.bmp: [testng] [2025-03-07 01:30:03,616] [pool-1-thread-3] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2025-03-07 01:30:05,631] [pool-1-thread-1] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2025-03-07 01:30:14,265] [pool-1-thread-3] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2025-03-07 01:30:25,053] [pool-1-thread-3] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2025-03-07 01:32:50,709] [pool-1-thread-8] Initializing /data/aryeh/030408 2 1.oib: [testng] [2025-03-07 01:32:59,673] [pool-1-thread-8] Initializing /data/david/Image0016.oif: [testng] [2025-03-07 01:35:27,192] [pool-1-thread-1] Initializing /data/molly/11OCT2.OIF: [testng] [2025-03-07 01:36:48,980] [pool-1-thread-8] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2025-03-07 01:37:04,655] [pool-1-thread-3] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2025-03-07 01:37:41,308] [pool-1-thread-3] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2025-03-07 01:39:37,993] [pool-1-thread-3] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2025-03-07 01:39:51,782] [pool-1-thread-3] Initializing /data/brian/lambda02nm.oib: [testng] [2025-03-07 01:40:06,700] [pool-1-thread-3] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2025-03-07 01:40:22,266] [pool-1-thread-3] Initializing /data/karl/Image0009.oib: [testng] [2025-03-07 01:40:34,497] [pool-1-thread-3] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] [2025-03-07 01:40:48,571] [pool-1-thread-3] Initializing /data/glen/4205basal106072.oif: [testng] [2025-03-07 01:42:46,555] [pool-1-thread-9] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2025-03-07 01:42:58,771] [pool-1-thread-9] Initializing /data/glen/seqlinestack.oib: [testng] [2025-03-07 01:43:12,459] [pool-1-thread-9] Initializing /data/glen/singlesimul.oib: [testng] [2025-03-07 01:43:24,019] [pool-1-thread-9] Initializing /data/molly/11OCT9.OIF: [testng] [2025-03-07 01:44:48,294] [pool-1-thread-8] Initializing /data/aryeh/1h.oib: [testng] [2025-03-07 01:45:04,534] [pool-1-thread-8] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2025-03-07 01:45:17,766] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2025-03-07 01:45:30,596] [pool-1-thread-8] Initializing /data/glen/notsaturated.oib: [testng] [2025-03-07 01:45:43,655] [pool-1-thread-8] Initializing /data/brian/FLIP.oib: [testng] [2025-03-07 01:45:58,417] [pool-1-thread-8] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2025-03-07 01:46:11,624] [pool-1-thread-8] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2025-03-07 01:46:24,194] [pool-1-thread-8] Initializing /data/simon/never_worked.oib: [testng] [2025-03-07 01:46:37,553] [pool-1-thread-8] Initializing /data/johannes/step1.bmp: [testng] [2025-03-07 01:46:42,739] [pool-1-thread-8] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2025-03-07 01:46:57,218] [pool-1-thread-8] Initializing /data/kay/IM2pg.oib: [testng] [2025-03-07 01:47:11,436] [pool-1-thread-8] Initializing /data/stefan/cytosol_03e.oib: [testng] [2025-03-07 01:47:27,679] [pool-1-thread-8] Initializing /data/molly/11OCT8.OIF: [testng] [2025-03-07 01:49:33,073] [pool-1-thread-7] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2025-03-07 01:49:46,849] [pool-1-thread-7] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2025-03-07 01:49:58,475] [pool-1-thread-7] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2025-03-07 01:50:09,813] [pool-1-thread-4] Initializing /data/qa-17748/Image0079.oib: [testng] [2025-03-07 01:50:11,428] [pool-1-thread-7] Initializing /data/glen/singleseqline.oif: [testng] [2025-03-07 01:50:23,902] [pool-1-thread-4] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2025-03-07 01:50:39,818] [pool-1-thread-4] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2025-03-07 01:50:52,987] [pool-1-thread-4] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2025-03-07 01:51:04,617] [pool-1-thread-4] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2025-03-07 01:51:15,337] [pool-1-thread-4] Initializing /data/yoshihito/XY.oif: [testng] [2025-03-07 01:52:11,765] [pool-1-thread-4] Initializing /data/stefan/cytosol_01a.oif: [testng] [2025-03-07 01:55:06,516] [pool-1-thread-7] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2025-03-07 01:55:20,979] [pool-1-thread-7] Initializing /data/david/Image0016.oib: [testng] [2025-03-07 01:55:34,458] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2025-03-07 01:55:46,867] [pool-1-thread-5] Initializing /data/molly/11OCT7.OIF: [testng] [2025-03-07 01:56:23,620] [pool-1-thread-7] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2025-03-07 01:56:35,486] [pool-1-thread-7] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2025-03-07 01:57:17,381] [pool-1-thread-6] Initializing /data/allan/62909#1.oib: [testng] [2025-03-07 01:57:24,202] [pool-1-thread-6] Initializing /data/molly/11OCT11.OIF: [testng] [2025-03-07 02:02:11,901] [pool-1-thread-12] Initializing /data/glen/simulstack.oif: [testng] [2025-03-07 02:05:05,990] [pool-1-thread-2] Initializing /data/brian/LILY POLLEN.oib: [testng] [2025-03-07 02:05:27,092] [pool-1-thread-2] Initializing /data/molly/11OCT10.OIF: [testng] [2025-03-07 02:12:18,593] [pool-1-thread-11] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2025-03-07 02:12:25,992] [pool-1-thread-11] Initializing /data/christian/20min.oif: [testng] [2025-03-07 02:13:05,755] [pool-1-thread-11] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2025-03-07 02:13:17,672] [pool-1-thread-11] Initializing /data/aryeh/control_test.oib: [testng] [2025-03-07 02:13:50,921] [pool-1-thread-11] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2025-03-07 02:15:33,356] [pool-1-thread-11] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2025-03-07 02:22:02,859] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2025-03-07 02:22:13,466] [pool-1-thread-7] Initializing /data/qa-17748/Image0098.oib: [testng] [2025-03-07 02:22:21,367] [pool-1-thread-7] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2025-03-07 02:22:30,150] [pool-1-thread-7] Initializing /data/tom/RGB-1.avi: [testng] [2025-03-07 02:22:35,905] [pool-1-thread-7] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2025-03-07 02:22:47,810] [pool-1-thread-7] Initializing /data/brian/Kaede15.oib: [testng] [2025-03-07 02:22:57,302] [pool-1-thread-7] Initializing /data/stefan/cytosol_08b.oif: [testng] [2025-03-07 02:36:14,271] [pool-1-thread-12] Initializing /data/glen/Null file/test change.oif: [testng] [2025-03-07 02:37:28,837] [pool-1-thread-12] Initializing /data/yoshihito/XY.oib: [testng] [2025-03-07 02:37:38,015] [pool-1-thread-12] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2025-03-07 02:38:14,268] [pool-1-thread-8] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2025-03-07 02:38:23,928] [pool-1-thread-8] Initializing /data/johannes/step4.bmp: [testng] [2025-03-07 02:38:28,491] [pool-1-thread-8] Initializing /data/johannes/step4b.bmp: [testng] [2025-03-07 02:38:32,640] [pool-1-thread-8] Initializing /data/simon/used_to_work.oib: [testng] [2025-03-07 02:38:44,266] [pool-1-thread-8] Initializing /data/johannes/step3.bmp: [testng] [2025-03-07 02:38:48,749] [pool-1-thread-8] Initializing /data/chris/missegragation-15.oib: [testng] [2025-03-07 02:38:59,330] [pool-1-thread-8] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2025-03-07 02:39:18,741] [pool-1-thread-8] Initializing /data/stefan/yc2_live-03.oib: [testng] [2025-03-07 02:39:30,512] [pool-1-thread-8] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2025-03-07 02:39:35,857] [pool-1-thread-3] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2025-03-07 02:40:55,342] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2025-03-07 02:40:59,287] [pool-1-thread-8] Initializing /data/jae/Image0001.oib: [testng] [2025-03-07 02:41:04,244] [pool-1-thread-5] Initializing /data/glen/singlesimul.oif: [testng] [2025-03-07 02:41:07,379] [pool-1-thread-8] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2025-03-07 02:42:32,078] [pool-1-thread-5] Initializing /data/marc/V0606L.oib: [testng] [2025-03-07 02:42:49,897] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2025-03-07 02:42:59,695] [pool-1-thread-5] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] 02:50:41,440 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:50:41,440 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:50:41,441 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-07_02-50-41.log] [testng] 02:50:41,442 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4344640f - End of configuration. [testng] 02:54:32,453 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:54:32,454 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:54:32,456 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-07_02-54-32.log] [testng] 02:54:32,457 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d2e8361 - End of configuration. [testng] 03:50:36,229 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 03:50:36,229 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:50:36,231 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-07_03-50-36.log] [testng] 03:50:36,231 |-INFO in ch.qos.logback.core.sift.SiftProcessor@728925e6 - End of configuration. [testng] 05:35:28,137 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 05:35:28,137 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:35:28,138 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-07_05-35-28.log] [testng] 05:35:28,139 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d1d65fd - End of configuration. [testng] 06:02:20,070 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 06:02:20,070 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:02:20,071 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-07_06-02-20.log] [testng] 06:02:20,071 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c507e77 - End of configuration. [testng] 06:36:52,367 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 06:36:52,368 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:36:52,368 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-07_06-36-52.log] [testng] 06:36:52,369 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ff4f301 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 335 minutes 34 seconds Finished: SUCCESS