![[Jenkins]](/jenkins/static/9bac06d9/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 368 originally caused by: Started by upstream project "Trigger" build number 394 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4 [BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins15600609839976306703.sh + '[' pyramid-tiff = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_58661_merge_ci -v /uod/idr/repos/curated/pyramid-tiff:/data -v /uod/idr-scratch/merge-ci/curated/pyramid-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/maven-metadata.xml [resolver:resolve] Could not transfer metadata org.openmicroscopy:ome-mdbtools:5.3.4-SNAPSHOT/maven-metadata.xml from/to imagej.public (https://maven.imagej.net/content/groups/public): status code: 503, reason phrase: Service Unavailable (503) [resolver:resolve] org.openmicroscopy:ome-mdbtools:5.3.4-SNAPSHOT/maven-metadata.xml failed to transfer from https://maven.imagej.net/content/groups/public during a previous attempt. This failure was cached in the local repository and resolution will not be reattempted until the update interval of imagej.public has elapsed or updates are forced. Original error: Could not transfer metadata org.openmicroscopy:ome-mdbtools:5.3.4-SNAPSHOT/maven-metadata.xml from/to imagej.public (https://maven.imagej.net/content/groups/public): status code: 503, reason phrase: Service Unavailable (503) [resolver:resolve] org.openmicroscopy:ome-mdbtools:5.3.4-SNAPSHOT/maven-metadata.xml failed to transfer from https://maven.imagej.net/content/groups/public during a previous attempt. This failure was cached in the local repository and resolution will not be reattempted until the update interval of imagej.public has elapsed or updates are forced. Original error: Could not transfer metadata org.openmicroscopy:ome-mdbtools:5.3.4-SNAPSHOT/maven-metadata.xml from/to imagej.public (https://maven.imagej.net/content/groups/public): status code: 503, reason phrase: Service Unavailable (503) [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/metakit/5.8.9-SNAPSHOT/maven-metadata.xml [resolver:resolve] Could not transfer metadata org.openmicroscopy:metakit:5.8.9-SNAPSHOT/maven-metadata.xml from/to imagej.public (https://maven.imagej.net/content/groups/public): status code: 503, reason phrase: Service Unavailable (503) [resolver:resolve] org.openmicroscopy:metakit:5.8.9-SNAPSHOT/maven-metadata.xml failed to transfer from https://maven.imagej.net/content/groups/public during a previous attempt. This failure was cached in the local repository and resolution will not be reattempted until the update interval of imagej.public has elapsed or updates are forced. Original error: Could not transfer metadata org.openmicroscopy:metakit:5.8.9-SNAPSHOT/maven-metadata.xml from/to imagej.public (https://maven.imagej.net/content/groups/public): status code: 503, reason phrase: Service Unavailable (503) [resolver:resolve] org.openmicroscopy:metakit:5.8.9-SNAPSHOT/maven-metadata.xml failed to transfer from https://maven.imagej.net/content/groups/public during a previous attempt. This failure was cached in the local repository and resolution will not be reattempted until the update interval of imagej.public has elapsed or updates are forced. Original error: Could not transfer metadata org.openmicroscopy:metakit:5.8.9-SNAPSHOT/maven-metadata.xml from/to imagej.public (https://maven.imagej.net/content/groups/public): status code: 503, reason phrase: Service Unavailable (503) [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/maven-metadata.xml [resolver:resolve] Could not transfer metadata org.openmicroscopy:ome-poi:5.3.10-SNAPSHOT/maven-metadata.xml from/to imagej.public (https://maven.imagej.net/content/groups/public): status code: 503, reason phrase: Service Unavailable (503) [resolver:resolve] org.openmicroscopy:ome-poi:5.3.10-SNAPSHOT/maven-metadata.xml failed to transfer from https://maven.imagej.net/content/groups/public during a previous attempt. This failure was cached in the local repository and resolution will not be reattempted until the update interval of imagej.public has elapsed or updates are forced. Original error: Could not transfer metadata org.openmicroscopy:ome-poi:5.3.10-SNAPSHOT/maven-metadata.xml from/to imagej.public (https://maven.imagej.net/content/groups/public): status code: 503, reason phrase: Service Unavailable (503) [resolver:resolve] org.openmicroscopy:ome-poi:5.3.10-SNAPSHOT/maven-metadata.xml failed to transfer from https://maven.imagej.net/content/groups/public during a previous attempt. This failure was cached in the local repository and resolution will not be reattempted until the update interval of imagej.public has elapsed or updates are forced. Original error: Could not transfer metadata org.openmicroscopy:ome-poi:5.3.10-SNAPSHOT/maven-metadata.xml from/to imagej.public (https://maven.imagej.net/content/groups/public): status code: 503, reason phrase: Service Unavailable (503) [resolver:resolve] Resolving artifacts [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/maven-metadata.xml [resolver:resolve] Could not transfer metadata org.openmicroscopy:ome-mdbtools:5.3.4-SNAPSHOT/maven-metadata.xml from/to imagej.public (https://maven.imagej.net/content/groups/public): status code: 503, reason phrase: Service Unavailable (503) [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/metakit/5.8.9-SNAPSHOT/maven-metadata.xml [resolver:resolve] Could not transfer metadata org.openmicroscopy:metakit:5.8.9-SNAPSHOT/maven-metadata.xml from/to imagej.public (https://maven.imagej.net/content/groups/public): status code: 503, reason phrase: Service Unavailable (503) [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/maven-metadata.xml [resolver:resolve] Could not transfer metadata org.openmicroscopy:ome-poi:5.3.10-SNAPSHOT/maven-metadata.xml from/to imagej.public (https://maven.imagej.net/content/groups/public): status code: 503, reason phrase: Service Unavailable (503) compile-tests: [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/maven-metadata.xml [resolver:resolve] Could not transfer metadata org.openmicroscopy:ome-mdbtools:5.3.4-SNAPSHOT/maven-metadata.xml from/to imagej.public (https://maven.imagej.net/content/groups/public): status code: 503, reason phrase: Service Unavailable (503) [resolver:resolve] org.openmicroscopy:ome-mdbtools:5.3.4-SNAPSHOT/maven-metadata.xml failed to transfer from https://maven.imagej.net/content/groups/public during a previous attempt. This failure was cached in the local repository and resolution will not be reattempted until the update interval of imagej.public has elapsed or updates are forced. Original error: Could not transfer metadata org.openmicroscopy:ome-mdbtools:5.3.4-SNAPSHOT/maven-metadata.xml from/to imagej.public (https://maven.imagej.net/content/groups/public): status code: 503, reason phrase: Service Unavailable (503) [resolver:resolve] org.openmicroscopy:ome-mdbtools:5.3.4-SNAPSHOT/maven-metadata.xml failed to transfer from https://maven.imagej.net/content/groups/public during a previous attempt. This failure was cached in the local repository and resolution will not be reattempted until the update interval of imagej.public has elapsed or updates are forced. Original error: Could not transfer metadata org.openmicroscopy:ome-mdbtools:5.3.4-SNAPSHOT/maven-metadata.xml from/to imagej.public (https://maven.imagej.net/content/groups/public): status code: 503, reason phrase: Service Unavailable (503) [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/metakit/5.8.9-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/maven-metadata.xml [resolver:resolve] Resolving artifacts [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/maven-metadata.xml [resolver:resolve] Could not transfer metadata org.openmicroscopy:ome-mdbtools:5.3.4-SNAPSHOT/maven-metadata.xml from/to imagej.public (https://maven.imagej.net/content/groups/public): status code: 503, reason phrase: Service Unavailable (503) [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/metakit/5.8.9-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/maven-metadata.xml [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 02:30:35,335 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 02:30:35,337 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - No custom configurators were discovered as a service. [testng] 02:30:35,337 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:30:35,338 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:30:35,338 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 02:30:35,339 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 02:30:35,339 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 02:30:35,339 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:30:35,340 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:30:35,340 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 02:30:35,340 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 02:30:35,341 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 02:30:35,505 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:30:35,505 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:30:35,527 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:30:35,527 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:30:35,532 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:30:35,532 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:30:35,532 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:30:35,533 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:30:35,533 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@65c7a252 - End of configuration. [testng] 02:30:35,534 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@38cee291 - Registering current configuration as safe fallback point [testng] 02:30:35,534 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 194 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-09 02:30:35,542] [main] java.version = 11.0.16 [testng] 02:30:35,545 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:30:35,545 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:30:35,586 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-09_02-30-35.log] [testng] 02:30:35,588 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13d73f29 - End of configuration. [testng] [2025-03-09 02:30:35,612] [main] testng.directory = /data [testng] [2025-03-09 02:30:35,612] [main] testng.configDirectory = /config [testng] [2025-03-09 02:30:35,621] [main] testng.multiplier = 1.0 [testng] [2025-03-09 02:30:35,622] [main] testng.in-memory = false [testng] [2025-03-09 02:30:35,623] [main] testng.allow-missing = false [testng] [2025-03-09 02:30:35,623] [main] user.language = en [testng] [2025-03-09 02:30:35,623] [main] user.country = ${user.country} [testng] [2025-03-09 02:30:35,623] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2025-03-09 02:30:36,048] [main] ---------------------------------------- [testng] [2025-03-09 02:30:36,048] [main] Total files: 2 [testng] [2025-03-09 02:30:36,048] [main] Scan time: 0.425 s (212 ms/file) [testng] [2025-03-09 02:30:36,049] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 2 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-09 02:31:20,410] [pool-1-thread-1] Initializing /data/idr0053/MEFS_cryo.tif: [testng] 02:31:20,411 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:31:20,411 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:31:20,413 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-09_02-31-20.log] [testng] 02:31:20,413 |-INFO in ch.qos.logback.core.sift.SiftProcessor@24081b5c - End of configuration. [testng] [2025-03-09 02:31:42,118] [pool-1-thread-2] Initializing /data/samples/2k-tiled.tiff: [testng] 02:31:42,119 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:31:42,119 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:31:42,120 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-09_02-31-42.log] [testng] 02:31:42,120 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c365f52 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 106, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 14 minutes 21 seconds Finished: SUCCESS