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Started by upstream project "BIOFORMATS-test-repo" build number 368 originally caused by: Started by upstream project "Trigger" build number 394 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins13897567857242686123.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_58734_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/metakit/5.8.9-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/maven-metadata.xml [resolver:resolve] Resolving artifacts [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/metakit/5.8.9-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/maven-metadata.xml compile-tests: [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/metakit/5.8.9-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/maven-metadata.xml [resolver:resolve] Resolving artifacts [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/metakit/5.8.9-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/maven-metadata.xml [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 12:15:18,320 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 12:15:18,321 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - No custom configurators were discovered as a service. [testng] 12:15:18,321 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 12:15:18,322 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 12:15:18,323 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 12:15:18,323 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 12:15:18,323 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 12:15:18,323 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 12:15:18,324 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 12:15:18,324 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 12:15:18,325 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 12:15:18,325 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 12:15:18,491 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 12:15:18,491 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 12:15:18,513 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 12:15:18,514 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 12:15:18,519 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 12:15:18,519 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 12:15:18,519 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 12:15:18,520 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 12:15:18,520 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@65c7a252 - End of configuration. [testng] 12:15:18,521 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@38cee291 - Registering current configuration as safe fallback point [testng] 12:15:18,521 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 197 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-09 12:15:18,530] [main] java.version = 11.0.16 [testng] 12:15:18,533 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 12:15:18,533 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:15:18,575 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-09_12-15-18.log] [testng] 12:15:18,577 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13d73f29 - End of configuration. [testng] [2025-03-09 12:15:18,579] [main] testng.directory = /data [testng] [2025-03-09 12:15:18,579] [main] testng.configDirectory = /config [testng] [2025-03-09 12:15:18,589] [main] testng.multiplier = 1.0 [testng] [2025-03-09 12:15:18,590] [main] testng.in-memory = false [testng] [2025-03-09 12:15:18,590] [main] testng.allow-missing = false [testng] [2025-03-09 12:15:18,590] [main] user.language = en [testng] [2025-03-09 12:15:18,591] [main] user.country = ${user.country} [testng] [2025-03-09 12:15:18,591] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2025-03-09 12:20:45,220] [main] ---------------------------------------- [testng] [2025-03-09 12:20:45,220] [main] Total files: 15735 [testng] [2025-03-09 12:20:45,220] [main] Scan time: 326.629 s (20 ms/file) [testng] [2025-03-09 12:20:45,221] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-09 12:26:33,878] [pool-1-thread-1] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] 12:26:33,879 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 12:26:33,879 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:26:33,881 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-09_12-26-33.log] [testng] 12:26:33,882 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e2ede70 - End of configuration. [testng] [2025-03-09 12:26:36,881] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] 12:26:36,881 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 12:26:36,881 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:26:36,882 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-09_12-26-36.log] [testng] 12:26:36,882 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e6b5692 - End of configuration. [testng] [2025-03-09 12:26:38,766] [pool-1-thread-11] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] 12:26:38,766 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 12:26:38,766 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:26:38,767 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-09_12-26-38.log] [testng] 12:26:38,768 |-INFO in ch.qos.logback.core.sift.SiftProcessor@243b1e06 - End of configuration. [testng] [2025-03-09 12:26:40,702] [pool-1-thread-10] Initializing /data/converted/vladan/vladan.tif: [testng] 12:26:40,702 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 12:26:40,702 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:26:40,702 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-09_12-26-40.log] [testng] 12:26:40,703 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a75f157 - End of configuration. [testng] [2025-03-09 12:26:42,473] [pool-1-thread-9] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] 12:26:42,473 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 12:26:42,473 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:26:42,474 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-09_12-26-42.log] [testng] 12:26:42,474 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52da22fa - End of configuration. [testng] [2025-03-09 12:26:44,147] [pool-1-thread-8] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] 12:26:44,147 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 12:26:44,147 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:26:44,148 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-09_12-26-44.log] [testng] 12:26:44,148 |-INFO in ch.qos.logback.core.sift.SiftProcessor@57d77734 - End of configuration. [testng] [2025-03-09 12:26:45,854] [pool-1-thread-7] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] 12:26:45,854 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 12:26:45,854 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:26:45,855 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-09_12-26-45.log] [testng] 12:26:45,855 |-INFO in ch.qos.logback.core.sift.SiftProcessor@77239f4f - End of configuration. [testng] [2025-03-09 12:26:48,660] [pool-1-thread-6] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] 12:26:48,661 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 12:26:48,661 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:26:48,661 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-09_12-26-48.log] [testng] 12:26:48,662 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21cdcd2a - End of configuration. [testng] [2025-03-09 12:26:51,779] [pool-1-thread-5] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] 12:26:51,779 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 12:26:51,779 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:26:51,780 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-09_12-26-51.log] [testng] 12:26:51,780 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3b7239ed - End of configuration. [testng] [2025-03-09 12:26:53,884] [pool-1-thread-4] Initializing /data/converted/michel/b.tif: [testng] 12:26:53,885 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 12:26:53,885 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:26:53,885 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-09_12-26-53.log] [testng] 12:26:53,885 |-INFO in ch.qos.logback.core.sift.SiftProcessor@29b20140 - End of configuration. [testng] [2025-03-09 12:26:55,580] [pool-1-thread-3] Initializing /data/converted/kelsey/650x514BW.tif: [testng] 12:26:55,581 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 12:26:55,581 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:26:55,581 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-09_12-26-55.log] [testng] 12:26:55,582 |-INFO in ch.qos.logback.core.sift.SiftProcessor@747f6dc - End of configuration. [testng] [2025-03-09 12:26:57,124] [pool-1-thread-2] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] 12:26:57,124 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 12:26:57,124 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:26:57,125 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-09_12-26-57.log] [testng] 12:26:57,125 |-INFO in ch.qos.logback.core.sift.SiftProcessor@44f4a9cb - End of configuration. [testng] [2025-03-09 12:27:41,774] [pool-1-thread-3] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] [2025-03-09 12:27:44,599] [pool-1-thread-9] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2025-03-09 12:27:47,752] [pool-1-thread-5] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2025-03-09 12:27:58,607] [pool-1-thread-8] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2025-03-09 12:28:12,833] [pool-1-thread-4] Initializing /data/converted/sebastien/test.tif: [testng] [2025-03-09 12:28:18,955] [pool-1-thread-5] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2025-03-09 12:28:27,191] [pool-1-thread-6] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2025-03-09 12:28:48,265] [pool-1-thread-9] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2025-03-09 12:29:08,949] [pool-1-thread-8] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2025-03-09 12:29:37,212] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2025-03-09 12:29:51,700] [pool-1-thread-5] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2025-03-09 12:30:51,462] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2025-03-09 12:31:14,405] [pool-1-thread-11] Initializing /data/scott/Slide133-11.tif: [testng] [2025-03-09 12:32:09,265] [pool-1-thread-11] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2025-03-09 12:35:45,722] [pool-1-thread-2] Initializing /data/converted/kelsey/432x342BW.tif: [testng] [2025-03-09 12:36:37,421] [pool-1-thread-2] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2025-03-09 12:37:18,816] [pool-1-thread-11] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] [2025-03-09 12:37:35,221] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2025-03-09 12:38:23,998] [pool-1-thread-11] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2025-03-09 12:38:31,799] [pool-1-thread-7] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2025-03-09 12:39:15,210] [pool-1-thread-10] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] [2025-03-09 12:41:08,947] [pool-1-thread-3] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2025-03-09 12:42:52,413] [pool-1-thread-7] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2025-03-09 12:43:54,557] [pool-1-thread-12] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2025-03-09 12:44:21,338] [pool-1-thread-11] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2025-03-09 12:45:26,748] [pool-1-thread-12] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2025-03-09 12:46:07,461] [pool-1-thread-4] Initializing /data/scott/Slide133-08.tif: [testng] [2025-03-09 12:46:49,385] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2025-03-09 12:46:53,841] [pool-1-thread-5] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2025-03-09 12:47:05,998] [pool-1-thread-4] Initializing /data/converted/sebastien/F1.tif: [testng] [2025-03-09 12:47:26,089] [pool-1-thread-10] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2025-03-09 12:49:48,225] [pool-1-thread-1] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2025-03-09 12:49:59,490] [pool-1-thread-8] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2025-03-09 12:51:12,825] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2025-03-09 12:52:17,788] [pool-1-thread-6] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2025-03-09 12:53:16,384] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2025-03-09 12:54:25,420] [pool-1-thread-6] Initializing /data/converted/dietmar/137.tif: [testng] [2025-03-09 12:59:00,421] [pool-1-thread-2] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2025-03-09 12:59:38,847] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2025-03-09 13:01:06,534] [pool-1-thread-2] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] [2025-03-09 13:03:01,054] [pool-1-thread-11] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] [2025-03-09 13:04:38,301] [pool-1-thread-11] Initializing /data/scott/Slide133-01.tif: [testng] [2025-03-09 13:05:59,593] [pool-1-thread-11] Initializing /data/converted/othmar/z-stack.tif: [testng] [2025-03-09 13:11:44,642] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2025-03-09 13:18:06,496] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2025-03-09 13:18:30,907] [pool-1-thread-12] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] [2025-03-09 13:19:38,753] [pool-1-thread-6] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2025-03-09 13:20:07,319] [pool-1-thread-12] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2025-03-09 13:21:27,233] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2025-03-09 13:21:55,828] [pool-1-thread-10] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2025-03-09 13:22:16,226] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2025-03-09 13:25:26,787] [pool-1-thread-8] Initializing /data/converted/converted/2chzt.tif: [testng] [2025-03-09 13:33:07,027] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2025-03-09 13:40:27,451] [pool-1-thread-3] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] [2025-03-09 13:41:28,586] [pool-1-thread-1] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2025-03-09 13:44:35,722] [pool-1-thread-12] Initializing /data/converted/stephan/notok2.tif: [testng] [2025-03-09 13:45:27,921] [pool-1-thread-4] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2025-03-09 13:47:40,732] [pool-1-thread-4] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2025-03-09 13:48:31,162] [pool-1-thread-6] Initializing /data/converted/karsten/Bild2.tif: [testng] [2025-03-09 13:50:36,605] [pool-1-thread-6] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2025-03-09 13:51:09,278] [pool-1-thread-12] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] [2025-03-09 13:51:31,833] [pool-1-thread-11] Initializing /data/converted/othmar/mozaic.tif: [testng] [2025-03-09 13:53:56,812] [pool-1-thread-1] Initializing /data/converted/stephan/notok1.tif: [testng] [2025-03-09 13:54:02,558] [pool-1-thread-10] Initializing /data/converted/converted/damian.tif: [testng] [2025-03-09 13:55:24,195] [pool-1-thread-10] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2025-03-09 13:56:36,694] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2025-03-09 13:57:53,366] [pool-1-thread-10] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] 13:58:02,778 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 13:58:02,779 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 13:58:02,779 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-09_13-58-02.log] [testng] 13:58:02,780 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1e94858e - End of configuration. [testng] [2025-03-09 14:00:12,424] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2025-03-09 14:01:07,624] [pool-1-thread-4] Initializing /data/converted/darren/section0002_w1.tif: [testng] [2025-03-09 14:02:25,087] [pool-1-thread-4] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2025-03-09 14:03:29,971] [pool-1-thread-11] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2025-03-09 14:05:04,327] [pool-1-thread-4] Initializing /data/converted/dan/adultnr1.tif: [testng] [2025-03-09 14:08:19,088] [pool-1-thread-4] Initializing /data/converted/dietmar/138.tif: [testng] [2025-03-09 14:08:32,408] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2025-03-09 14:19:48,981] [pool-1-thread-12] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2025-03-09 14:21:29,269] [pool-1-thread-9] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2025-03-09 14:22:31,697] [pool-1-thread-1] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2025-03-09 14:22:37,477] [pool-1-thread-9] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2025-03-09 14:23:51,326] [pool-1-thread-9] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2025-03-09 14:24:08,936] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2025-03-09 14:25:10,055] [pool-1-thread-9] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2025-03-09 14:30:24,577] [pool-1-thread-4] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2025-03-09 14:31:06,970] [pool-1-thread-5] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2025-03-09 14:32:42,516] [pool-1-thread-11] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2025-03-09 14:33:13,561] [pool-1-thread-5] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2025-03-09 14:34:50,789] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] 14:36:07,823 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 14:36:07,823 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:36:07,825 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-09_14-36-07.log] [testng] 14:36:07,826 |-INFO in ch.qos.logback.core.sift.SiftProcessor@16fcba8 - End of configuration. [testng] [2025-03-09 14:36:29,093] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2025-03-09 14:44:14,954] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2025-03-09 14:44:42,101] [pool-1-thread-2] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2025-03-09 14:45:17,223] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] [2025-03-09 14:45:29,256] [pool-1-thread-1] Initializing /data/converted/converted/mri-stack.tif: [testng] [2025-03-09 14:46:33,650] [pool-1-thread-1] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2025-03-09 14:48:03,169] [pool-1-thread-1] Initializing /data/converted/converted/2chz.tif: [testng] [2025-03-09 14:48:54,464] [pool-1-thread-3] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2025-03-09 14:51:19,418] [pool-1-thread-3] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] 14:51:26,696 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 14:51:26,696 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:51:26,697 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-09_14-51-26.log] [testng] 14:51:26,698 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a5a982f - End of configuration. [testng] [2025-03-09 14:53:51,455] [pool-1-thread-4] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2025-03-09 14:54:59,889] [pool-1-thread-4] Initializing /data/converted/michel/d.tif: [testng] [2025-03-09 14:55:17,930] [pool-1-thread-5] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] [2025-03-09 14:56:09,027] [pool-1-thread-1] Initializing /data/converted/lior/live+cf5b.tif: [testng] [2025-03-09 14:56:39,562] [pool-1-thread-4] Initializing /data/scott/Slide133-04.tif: [testng] [2025-03-09 14:56:45,596] [pool-1-thread-3] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2025-03-09 14:57:22,135] [pool-1-thread-11] Initializing /data/converted/michel/e.tif: [testng] [2025-03-09 14:58:02,992] [pool-1-thread-4] Initializing /data/converted/nicolas/image.tif: [testng] [2025-03-09 14:58:48,370] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2025-03-09 14:59:31,330] [pool-1-thread-4] Initializing /data/converted/michel/a.tif: [testng] [2025-03-09 15:00:24,055] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2025-03-09 15:00:46,453] [pool-1-thread-4] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2025-03-09 15:01:13,241] [pool-1-thread-8] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2025-03-09 15:02:01,689] [pool-1-thread-4] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2025-03-09 15:02:22,966] [pool-1-thread-8] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] [2025-03-09 15:03:20,317] [pool-1-thread-10] Initializing /data/converted/michel/c.tif: [testng] [2025-03-09 15:03:47,680] [pool-1-thread-9] Initializing /data/converted/karsten/Bild1.tif: [testng] [2025-03-09 15:03:58,551] [pool-1-thread-12] Initializing /data/othmar/mozaic.tif: [testng] 15:51:52,499 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 15:51:52,499 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 15:51:52,500 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-09_15-51-52.log] [testng] 15:51:52,501 |-INFO in ch.qos.logback.core.sift.SiftProcessor@358caf6e - End of configuration. [testng] 16:23:20,499 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 16:23:20,499 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 16:23:20,500 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-09_16-23-20.log] [testng] 16:23:20,500 |-INFO in ch.qos.logback.core.sift.SiftProcessor@55872ed0 - End of configuration. [testng] 16:29:50,087 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 16:29:50,087 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 16:29:50,088 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-09_16-29-50.log] [testng] 16:29:50,088 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1d8cfad5 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 254 minutes 42 seconds Finished: SUCCESS