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Started by upstream project "BIOFORMATS-test-repo" build number 42 originally caused by: Started by upstream project "Trigger" build number 49 originally caused by: Started by user devspace Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins15765874965561639674.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_5888_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 06:08:28,393 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 06:08:28,395 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service. [testng] 06:08:28,395 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 06:08:28,396 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 06:08:28,397 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 06:08:28,397 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 06:08:28,397 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 06:08:28,397 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 06:08:28,398 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 06:08:28,399 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 06:08:28,399 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 06:08:28,399 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 06:08:28,615 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 06:08:28,615 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 06:08:28,641 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 06:08:28,641 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 06:08:28,647 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 06:08:28,648 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 06:08:28,648 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 06:08:28,648 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 06:08:28,648 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration. [testng] 06:08:28,649 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point [testng] 06:08:28,649 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 251 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-04-23 06:08:28,659] [main] java.version = 11.0.16 [testng] 06:08:28,662 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 06:08:28,662 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:08:28,708 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-23_06-08-28.log] [testng] 06:08:28,709 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration. [testng] [2024-04-23 06:08:28,711] [main] testng.directory = /data [testng] [2024-04-23 06:08:28,712] [main] testng.configDirectory = /config [testng] [2024-04-23 06:08:28,722] [main] testng.multiplier = 1.0 [testng] [2024-04-23 06:08:28,723] [main] testng.in-memory = false [testng] [2024-04-23 06:08:28,723] [main] testng.allow-missing = false [testng] [2024-04-23 06:08:28,724] [main] user.language = en [testng] [2024-04-23 06:08:28,724] [main] user.country = ${user.country} [testng] [2024-04-23 06:08:28,724] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-04-23 06:08:43,008] [main] ---------------------------------------- [testng] [2024-04-23 06:08:43,009] [main] Total files: 4424 [testng] [2024-04-23 06:08:43,009] [main] Scan time: 14.284 s (3 ms/file) [testng] [2024-04-23 06:08:43,009] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 721 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-04-23 06:10:51,429] [pool-1-thread-1] Initializing /data/bene/3d-example-stack.tif: [testng] 06:10:51,430 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 06:10:51,430 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:10:51,432 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-23_06-10-51.log] [testng] 06:10:51,433 |-INFO in ch.qos.logback.core.sift.SiftProcessor@620d25ef - End of configuration. [testng] [2024-04-23 06:10:51,515] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z058.tif: [testng] 06:10:51,515 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 06:10:51,515 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:10:51,517 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-23_06-10-51.log] [testng] 06:10:51,517 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6bc2521a - End of configuration. [testng] [2024-04-23 06:10:51,547] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x64.tiff: [testng] 06:10:51,547 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 06:10:51,547 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:10:51,548 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-23_06-10-51.log] [testng] 06:10:51,548 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e9628d9 - End of configuration. [testng] [2024-04-23 06:10:51,571] [pool-1-thread-10] Initializing /data/josiah/cell-Z10.C1.tiff: [testng] 06:10:51,572 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 06:10:51,572 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:10:51,573 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-23_06-10-51.log] [testng] 06:10:51,573 |-INFO in ch.qos.logback.core.sift.SiftProcessor@78d40985 - End of configuration. [testng] [2024-04-23 06:10:51,611] [pool-1-thread-9] Initializing /data/josiah/cell-Z24.C0.tiff: [testng] 06:10:51,611 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 06:10:51,611 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:10:51,612 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-23_06-10-51.log] [testng] 06:10:51,612 |-INFO in ch.qos.logback.core.sift.SiftProcessor@155d8874 - End of configuration. [testng] [2024-04-23 06:10:51,647] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0210.TIF: [testng] 06:10:51,647 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 06:10:51,647 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:10:51,648 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-23_06-10-51.log] [testng] 06:10:51,648 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15a532e0 - End of configuration. [testng] [2024-04-23 06:10:51,733] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z003.tif: [testng] 06:10:51,733 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 06:10:51,733 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:10:51,734 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-23_06-10-51.log] [testng] 06:10:51,734 |-INFO in ch.qos.logback.core.sift.SiftProcessor@310ee736 - End of configuration. [testng] [2024-04-23 06:10:51,774] [pool-1-thread-6] Initializing /data/christine/Image5D_4color test stack/RGB from I5D.tif: [testng] 06:10:51,774 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 06:10:51,774 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:10:51,774 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-23_06-10-51.log] [testng] 06:10:51,775 |-INFO in ch.qos.logback.core.sift.SiftProcessor@73b0116b - End of configuration. [testng] [2024-04-23 06:10:51,837] [pool-1-thread-5] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs006.TIF: [testng] 06:10:51,837 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 06:10:51,837 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:10:51,837 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-23_06-10-51.log] [testng] 06:10:51,838 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6ba12933 - End of configuration. [testng] [2024-04-23 06:10:51,936] [pool-1-thread-4] Initializing /data/josiah/cell-Z6.C0.tiff: [testng] 06:10:51,936 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 06:10:51,936 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:10:51,937 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-23_06-10-51.log] [testng] 06:10:51,937 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d2bb2cc - End of configuration. [testng] [2024-04-23 06:10:51,975] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z004.tif: [testng] 06:10:51,975 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 06:10:51,975 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:10:51,975 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-23_06-10-51.log] [testng] 06:10:51,976 |-INFO in ch.qos.logback.core.sift.SiftProcessor@213fd4fc - End of configuration. [testng] [2024-04-23 06:10:52,012] [pool-1-thread-2] Initializing /data/ascb/FND-10_PorterMitochondria_4800.tif: [testng] 06:10:52,012 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 06:10:52,012 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:10:52,013 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-23_06-10-52.log] [testng] 06:10:52,014 |-INFO in ch.qos.logback.core.sift.SiftProcessor@11226c84 - End of configuration. [testng] [2024-04-23 06:10:56,479] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z025.tif: [testng] [2024-04-23 06:10:56,505] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z002.tif: [testng] [2024-04-23 06:10:56,590] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z048.tif: [testng] [2024-04-23 06:10:56,939] [pool-1-thread-1] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] [2024-04-23 06:10:56,969] [pool-1-thread-7] Initializing /data/ascb/FND-13_PorterFranziniTransverse_4800.tif: [testng] [2024-04-23 06:10:59,574] [pool-1-thread-9] Initializing /data/alexa/test4.tif: [testng] [2024-04-23 06:10:59,601] [pool-1-thread-6] Initializing /data/brian/MFGTMP_080902150001t001B02f73d2.TIF: [testng] [2024-04-23 06:10:59,648] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z034.tif: [testng] [2024-04-23 06:10:59,705] [pool-1-thread-4] Initializing /data/samples/melissa/imagej-4gb/4gb-imagej.tif: [testng] [2024-04-23 06:10:59,987] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z011.tif: [testng] [2024-04-23 06:11:00,055] [pool-1-thread-8] Initializing /data/ascb/CYT-31_FriendOsmium_4800.tif: [testng] [2024-04-23 06:11:00,441] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z021.tif: [testng] [2024-04-23 06:11:00,582] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x32.tiff: [testng] [2024-04-23 06:11:00,642] [pool-1-thread-3] Initializing /data/jonathan/XSEC-02.TIF: [testng] [2024-04-23 06:11:00,672] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z047.tif: [testng] [2024-04-23 06:11:00,696] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z054.tif: [testng] [2024-04-23 06:11:00,872] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C1_Z026.tif: [testng] [2024-04-23 06:11:01,245] [pool-1-thread-5] Initializing /data/josiah/cell-Z2.C1.tiff: [testng] [2024-04-23 06:11:01,457] [pool-1-thread-11] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs014.TIF: [testng] [2024-04-23 06:11:01,592] [pool-1-thread-12] Initializing /data/damian/21m.tiff: [testng] [2024-04-23 06:11:01,649] [pool-1-thread-9] Initializing /data/public/condensation/C4.pattern3.tif: [testng] [2024-04-23 06:11:01,715] [pool-1-thread-10] Initializing /data/julien/Chadisoukkarieh.TIF: [testng] [2024-04-23 06:11:01,824] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z038.tif: [testng] [2024-04-23 06:11:01,926] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z026.tif: [testng] [2024-04-23 06:11:01,984] [pool-1-thread-1] Initializing /data/jonathan/Cut-1_001.tif: [testng] [2024-04-23 06:11:02,417] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C1_Z030.tif: [testng] [2024-04-23 06:11:02,453] [pool-1-thread-5] Initializing /data/public/condensation/E4.pattern5.tif: [testng] [2024-04-23 06:11:02,726] [pool-1-thread-12] Initializing /data/ascb/CYT-56_HowellGolgiRibbonRaw_4800.tif: [testng] [2024-04-23 06:11:03,026] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z027.tif: [testng] [2024-04-23 06:11:03,152] [pool-1-thread-6] Initializing /data/ascb/bad/FND-19_FawcettPhillipsSuccessive_4800.tif: [testng] [2024-04-23 06:11:03,334] [pool-1-thread-10] Initializing /data/josiah/cell-Z33.C1.tiff: [testng] [2024-04-23 06:11:03,379] [pool-1-thread-9] Initializing /data/public/libtiff/cramps.tif: [testng] [2024-04-23 06:11:03,661] [pool-1-thread-4] Initializing /data/ascb/CYT-77_PasolliMouse2_4800.tif: [testng] [2024-04-23 06:11:03,722] [pool-1-thread-11] Initializing /data/brian/MFGTMP_080902150001t001B02f73d1.TIF: [testng] [2024-04-23 06:11:03,869] [pool-1-thread-5] Initializing /data/jae/25Jan10_MDCK_2R_3Dstack_60x_1.tif: [testng] [2024-04-23 06:11:04,225] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0258.TIF: [testng] [2024-04-23 06:11:04,484] [pool-1-thread-10] Initializing 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Initializing /data/lzw/test.tif: [testng] [2024-04-23 06:13:09,669] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-60.tiff: [testng] [2024-04-23 06:13:09,687] [pool-1-thread-10] Initializing /data/josh/ZProjection of stack.tif: [testng] [2024-04-23 06:13:09,761] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x64.tiff: [testng] [2024-04-23 06:13:09,840] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z031.tif: [testng] [2024-04-23 06:13:10,025] [pool-1-thread-7] Initializing /data/ascb/FND-15_PorterFast_4800.tif: [testng] [2024-04-23 06:13:12,574] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C0_Z025.tif: [testng] [2024-04-23 06:13:12,707] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0228.TIF: [testng] [2024-04-23 06:13:12,768] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0239.TIF: [testng] [2024-04-23 06:13:12,941] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z031.tif: [testng] [2024-04-23 06:13:13,066] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z023.tif: [testng] [2024-04-23 06:13:13,272] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C1_Z013.tif: [testng] [2024-04-23 06:13:13,324] [pool-1-thread-10] Initializing /data/jeff/erdas_spnad83.tif: [testng] [2024-04-23 06:13:13,376] [pool-1-thread-9] Initializing /data/josiah/cell-Z7.C0.tiff: [testng] [2024-04-23 06:13:13,616] [pool-1-thread-2] Initializing /data/josh/NESb_C2_TP1.tiff: [testng] [2024-04-23 06:13:14,025] [pool-1-thread-4] Initializing /data/josiah/cell-Z18.C0.tiff: [testng] [2024-04-23 06:13:14,080] [pool-1-thread-11] Initializing /data/ascb/14346-myc-p125A.tif: [testng] [2024-04-23 06:13:14,144] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z007.tif: [testng] [2024-04-23 06:13:14,184] [pool-1-thread-9] Initializing /data/kevino/_BF_00000.tif: [testng] [2024-04-23 06:13:14,339] [pool-1-thread-10] Initializing /data/tom-kazimiers/test_noexiftool.tiff: [testng] [2024-04-23 06:13:14,651] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C0_Z034.tif: [testng] [2024-04-23 06:13:14,839] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z054.tif: [testng] [2024-04-23 06:13:14,876] [pool-1-thread-5] Initializing /data/ascb/CYT-152_Raben_Eating.tif: [testng] [2024-04-23 06:13:15,030] [pool-1-thread-2] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs010.TIF: [testng] [2024-04-23 06:13:15,074] [pool-1-thread-11] Initializing /data/imagesc-82872/WT_Uninfected_top_right.tiff: [testng] [2024-04-23 06:13:15,426] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z036.tif: [testng] [2024-04-23 06:13:15,552] [pool-1-thread-10] Initializing /data/public/condensation/A5.pattern2.tif: [testng] [2024-04-23 06:13:15,773] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C1_Z036.tif: [testng] [2024-04-23 06:13:15,946] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z018.tif: [testng] [2024-04-23 06:13:16,137] [pool-1-thread-10] Initializing /data/public/libtiff/jim___gg.tif: [testng] [2024-04-23 06:13:16,206] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z017.tif: [testng] [2024-04-23 06:13:16,292] [pool-1-thread-9] Initializing /data/misc/ms-paint.png: [testng] [2024-04-23 06:13:16,549] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C1_Z009.tif: [testng] [2024-04-23 06:13:16,689] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C1_Z015.tif: [testng] [2024-04-23 06:13:16,760] [pool-1-thread-1] Initializing /data/marc/ball48_LOCI_2_RGB_autoscale_10x.tif: [testng] [2024-04-23 06:13:16,874] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z000.tif: [testng] [2024-04-23 06:13:17,185] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z046.tif: [testng] [2024-04-23 06:13:17,226] [pool-1-thread-2] Initializing /data/ascb/bad/FND-16_FawcettPrincipal_4800.tif: [testng] [2024-04-23 06:13:17,326] [pool-1-thread-10] Initializing /data/damian/18m.tiff: [testng] [2024-04-23 06:13:17,622] [pool-1-thread-9] Initializing /data/carolyn/tumor_3.tif: [testng] [2024-04-23 06:13:17,682] [pool-1-thread-4] Initializing /data/josiah/cell-Z5.C0.tiff: [testng] [2024-04-23 06:13:17,808] [pool-1-thread-10] Initializing /data/big-images/2kx2k.tif: [testng] [2024-04-23 06:13:18,042] [pool-1-thread-1] Initializing /data/josh/NESb_C2_TP6.tiff: [testng] [2024-04-23 06:13:18,395] [pool-1-thread-4] Initializing /data/jeff/test36b.tif: [testng] [2024-04-23 06:13:18,433] [pool-1-thread-9] Initializing /data/josiah/cell-Z37.C0.tiff: [testng] [2024-04-23 06:13:18,658] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x16.tiff: [testng] [2024-04-23 06:13:18,909] [pool-1-thread-9] Initializing /data/stephane/P014.tif: [testng] [2024-04-23 06:13:19,009] [pool-1-thread-4] Initializing /data/chris/GFP + Vav2 actin 3b.tif: [testng] [2024-04-23 06:13:19,373] [pool-1-thread-1] Initializing /data/curtis/itk/MG63_0_1.tif: [testng] [2024-04-23 06:13:19,758] [pool-1-thread-4] Initializing /data/curtis/test1.tiff: [testng] [2024-04-23 06:13:19,865] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z019.tif: [testng] [2024-04-23 06:13:20,062] [pool-1-thread-4] Initializing /data/josh/NESb_C2_TP5.tiff: [testng] [2024-04-23 06:13:20,226] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z005.tif: [testng] [2024-04-23 06:13:20,295] [pool-1-thread-9] Initializing /data/edward/TestDoc2.tif: [testng] [2024-04-23 06:13:20,430] [pool-1-thread-10] Initializing /data/public/condensation/C4.pattern8.tif: [testng] [2024-04-23 06:13:20,696] [pool-1-thread-1] Initializing /data/josiah/cell-Z38.C0.tiff: [testng] [2024-04-23 06:13:21,464] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C0_Z021.tif: [testng] [2024-04-23 06:13:21,548] [pool-1-thread-10] Initializing /data/martin/head.tif: [testng] [2024-04-23 06:13:21,971] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0229.TIF: [testng] [2024-04-23 06:13:22,144] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z011.tif: [testng] [2024-04-23 06:13:23,326] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x48.tiff: [testng] [2024-04-23 06:13:23,351] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C1_Z023.tif: [testng] [2024-04-23 06:13:23,545] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0233.TIF: [testng] [2024-04-23 06:13:23,791] [pool-1-thread-3] Initializing /data/public/condensation/A6.pattern3.tif: [testng] [2024-04-23 06:13:23,896] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0214.TIF: [testng] [2024-04-23 06:13:23,951] [pool-1-thread-4] Initializing /data/boguslaw/Arabidopsis_large.tif: [testng] [2024-04-23 06:13:24,212] [pool-1-thread-11] Initializing 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[2024-04-23 06:13:26,384] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z047.tif: [testng] [2024-04-23 06:13:26,737] [pool-1-thread-1] Initializing /data/ascb/FND-25_PaladeGroup_4800.tif: [testng] [2024-04-23 06:13:26,973] [pool-1-thread-10] Initializing /data/ascb/CYT-93_PasolliMouse1c_4800.tif: [testng] [2024-04-23 06:13:27,205] [pool-1-thread-11] Initializing /data/josiah/cell-Z26.C1.tiff: [testng] [2024-04-23 06:13:27,236] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z003.tif: [testng] [2024-04-23 06:13:27,631] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z049.tif: [testng] [2024-04-23 06:13:27,682] [pool-1-thread-4] Initializing /data/samples/cielab/Ski_TC8-03_ROMM_lab.tif: [testng] [2024-04-23 06:13:27,852] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z042.tif: [testng] [2024-04-23 06:13:27,882] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z010.tif: [testng] [2024-04-23 06:13:28,113] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0250.TIF: [testng] [2024-04-23 06:13:28,340] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z029.tif: [testng] [2024-04-23 06:13:28,507] [pool-1-thread-6] Initializing /data/curtis/clown.tif: [testng] [2024-04-23 06:13:28,723] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x16.tiff: [testng] [2024-04-23 06:13:28,975] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z038.tif: [testng] [2024-04-23 06:13:29,060] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z036.tif: [testng] [2024-04-23 06:13:29,218] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z001.tif: [testng] [2024-04-23 06:13:29,324] [pool-1-thread-6] Initializing /data/david/100umbeads_stack.tif: [testng] [2024-04-23 06:13:29,595] [pool-1-thread-11] Initializing /data/misc/mri-stack.tif: [testng] [2024-04-23 06:13:29,689] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z060.tif: [testng] [2024-04-23 06:13:30,059] [pool-1-thread-9] Initializing /data/john/C100915-MA_AXIS_LEH_IMAGE_KIND_FLAT_ICE_3.tif: [testng] [2024-04-23 06:13:30,226] [pool-1-thread-11] Initializing /data/josiah/cell-Z16.C1.tiff: [testng] [2024-04-23 06:13:30,323] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z042.tif: [testng] [2024-04-23 06:13:30,691] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x48.tiff: [testng] [2024-04-23 06:13:30,712] [pool-1-thread-11] Initializing /data/ascb/CYT-149_Fader_Fusion.tif: [testng] [2024-04-23 06:13:30,997] [pool-1-thread-6] Initializing /data/public/condensation/A5.pattern1.tif: [testng] [2024-04-23 06:13:31,439] [pool-1-thread-9] Initializing /data/harvey/NR_Giemsa_Sag_CTb_Retina_02.tif: [testng] [2024-04-23 06:13:31,596] [pool-1-thread-6] Initializing /data/wayne/Rockies-rgb.tif: [testng] [2024-04-23 06:13:32,842] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z002.tif: [testng] [2024-04-23 06:13:33,244] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0207.TIF: [testng] [2024-04-23 06:13:33,306] [pool-1-thread-3] Initializing /data/josiah/cell-Z12.C0.tiff: [testng] [2024-04-23 06:13:33,712] [pool-1-thread-3] Initializing /data/curtis/images24.tiff: [testng] [2024-04-23 06:13:34,029] [pool-1-thread-9] Initializing /data/wayne/clown-rgb.tif: [testng] [2024-04-23 06:13:34,166] [pool-1-thread-3] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs000.TIF: [testng] [2024-04-23 06:13:34,301] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z062.tif: [testng] [2024-04-23 06:13:34,347] [pool-1-thread-1] Initializing /data/public/libtiff/ycbcr-cat.tif: [testng] [2024-04-23 06:13:34,467] [pool-1-thread-10] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-01.tiff: [testng] [2024-04-23 06:13:34,587] [pool-1-thread-9] Initializing /data/jay/Cleared%2fStack.tif: [testng] [2024-04-23 06:13:34,832] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0212.TIF: [testng] [2024-04-23 06:13:34,953] [pool-1-thread-10] Initializing /data/matt/CR20070824-002_6202483715-06 003_0_P23_0Red.tif: [testng] [2024-04-23 06:13:34,999] [pool-1-thread-1] Initializing /data/public/condensation/E4.pattern8.tif: [testng] [2024-04-23 06:13:35,443] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z016.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38213, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 5 minutes 40 seconds Finished: SUCCESS