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Started by upstream project "BIOFORMATS-test-repo" build number 369 originally caused by: Started by upstream project "Trigger" build number 395 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2 [BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins15369185041211215791.sh + '[' pyramid = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_58917_merge_ci -v /uod/idr/repos/curated/pyramid:/data -v /uod/idr-scratch/merge-ci/curated/pyramid:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/metakit/5.8.9-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/maven-metadata.xml [resolver:resolve] Could not transfer metadata org.openmicroscopy:ome-poi:5.3.10-SNAPSHOT/maven-metadata.xml from/to imagej.public (https://maven.imagej.net/content/groups/public): status code: 503, reason phrase: Service Unavailable (503) [resolver:resolve] org.openmicroscopy:ome-poi:5.3.10-SNAPSHOT/maven-metadata.xml failed to transfer from https://maven.imagej.net/content/groups/public during a previous attempt. This failure was cached in the local repository and resolution will not be reattempted until the update interval of imagej.public has elapsed or updates are forced. Original error: Could not transfer metadata org.openmicroscopy:ome-poi:5.3.10-SNAPSHOT/maven-metadata.xml from/to imagej.public (https://maven.imagej.net/content/groups/public): status code: 503, reason phrase: Service Unavailable (503) [resolver:resolve] org.openmicroscopy:ome-poi:5.3.10-SNAPSHOT/maven-metadata.xml failed to transfer from https://maven.imagej.net/content/groups/public during a previous attempt. This failure was cached in the local repository and resolution will not be reattempted until the update interval of imagej.public has elapsed or updates are forced. Original error: Could not transfer metadata org.openmicroscopy:ome-poi:5.3.10-SNAPSHOT/maven-metadata.xml from/to imagej.public (https://maven.imagej.net/content/groups/public): status code: 503, reason phrase: Service Unavailable (503) [resolver:resolve] Resolving artifacts [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/metakit/5.8.9-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/maven-metadata.xml [resolver:resolve] Could not transfer metadata org.openmicroscopy:ome-poi:5.3.10-SNAPSHOT/maven-metadata.xml from/to imagej.public (https://maven.imagej.net/content/groups/public): status code: 503, reason phrase: Service Unavailable (503) compile-tests: [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/metakit/5.8.9-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/maven-metadata.xml [resolver:resolve] Could not transfer metadata org.openmicroscopy:ome-poi:5.3.10-SNAPSHOT/maven-metadata.xml from/to imagej.public (https://maven.imagej.net/content/groups/public): status code: 503, reason phrase: Service Unavailable (503) [resolver:resolve] org.openmicroscopy:ome-poi:5.3.10-SNAPSHOT/maven-metadata.xml failed to transfer from https://maven.imagej.net/content/groups/public during a previous attempt. This failure was cached in the local repository and resolution will not be reattempted until the update interval of imagej.public has elapsed or updates are forced. Original error: Could not transfer metadata org.openmicroscopy:ome-poi:5.3.10-SNAPSHOT/maven-metadata.xml from/to imagej.public (https://maven.imagej.net/content/groups/public): status code: 503, reason phrase: Service Unavailable (503) [resolver:resolve] org.openmicroscopy:ome-poi:5.3.10-SNAPSHOT/maven-metadata.xml failed to transfer from https://maven.imagej.net/content/groups/public during a previous attempt. This failure was cached in the local repository and resolution will not be reattempted until the update interval of imagej.public has elapsed or updates are forced. Original error: Could not transfer metadata org.openmicroscopy:ome-poi:5.3.10-SNAPSHOT/maven-metadata.xml from/to imagej.public (https://maven.imagej.net/content/groups/public): status code: 503, reason phrase: Service Unavailable (503) [resolver:resolve] Resolving artifacts [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/metakit/5.8.9-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/maven-metadata.xml [resolver:resolve] Could not transfer metadata org.openmicroscopy:ome-poi:5.3.10-SNAPSHOT/maven-metadata.xml from/to imagej.public (https://maven.imagej.net/content/groups/public): status code: 503, reason phrase: Service Unavailable (503) [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 05:14:50,299 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 05:14:50,300 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - No custom configurators were discovered as a service. [testng] 05:14:50,300 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 05:14:50,301 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 05:14:50,302 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 05:14:50,302 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 05:14:50,302 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 05:14:50,302 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 05:14:50,303 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 05:14:50,303 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 05:14:50,303 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 05:14:50,304 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 05:14:50,462 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 05:14:50,462 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 05:14:50,483 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 05:14:50,483 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 05:14:50,488 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 05:14:50,488 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 05:14:50,488 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 05:14:50,489 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 05:14:50,489 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@3f6f6701 - End of configuration. [testng] 05:14:50,489 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@4f80542f - Registering current configuration as safe fallback point [testng] 05:14:50,490 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 187 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-10 05:14:50,498] [main] java.version = 17.0.2 [testng] 05:14:50,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 05:14:50,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:14:50,540 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-10_05-14-50.log] [testng] 05:14:50,541 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14bdbc74 - End of configuration. [testng] [2025-03-10 05:14:50,547] [main] testng.directory = /data [testng] [2025-03-10 05:14:50,547] [main] testng.configDirectory = /config [testng] [2025-03-10 05:14:50,555] [main] testng.multiplier = 1.0 [testng] [2025-03-10 05:14:50,556] [main] testng.in-memory = false [testng] [2025-03-10 05:14:50,556] [main] testng.allow-missing = false [testng] [2025-03-10 05:14:50,556] [main] user.language = fr [testng] [2025-03-10 05:14:50,556] [main] user.country = FR [testng] [2025-03-10 05:14:50,556] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2025-03-10 05:15:25,436] [main] ---------------------------------------- [testng] [2025-03-10 05:15:25,437] [main] Total files: 5 [testng] [2025-03-10 05:15:25,437] [main] Scan time: 34.88 s (6976 ms/file) [testng] [2025-03-10 05:15:25,437] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 3 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-10 05:16:27,006] [pool-1-thread-1] Initializing /data/111_pyramid_x: [testng] 05:16:27,007 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 05:16:27,007 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:16:27,008 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-10_05-16-27.log] [testng] 05:16:27,008 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4697343a - End of configuration. [testng] [2025-03-10 05:16:38,254] [pool-1-thread-3] Initializing /data/101_pyramid: [testng] 05:16:38,255 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 05:16:38,255 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:16:38,256 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-10_05-16-38.log] [testng] 05:16:38,257 |-INFO in ch.qos.logback.core.sift.SiftProcessor@793730d0 - End of configuration. [testng] [2025-03-10 05:16:50,423] [pool-1-thread-2] Initializing /data/pattern/channels.pattern: [testng] 05:16:50,423 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 05:16:50,423 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:16:50,424 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-10_05-16-50.log] [testng] 05:16:50,424 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1679d083 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 159, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 11 minutes 40 seconds Finished: SUCCESS