Started by upstream project "BIOFORMATS-test-repo" build number 371 originally caused by: Started by user devspace Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@10 [BIOFORMATS-test-folder@10] $ /bin/bash -xe /tmp/jenkins15325321677873104901.sh + '[' olympus-oir = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_58971_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 11:41:28,554 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 11:41:28,556 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - No custom configurators were discovered as a service. [testng] 11:41:28,556 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 11:41:28,557 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 11:41:28,557 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 11:41:28,557 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 11:41:28,558 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 11:41:28,558 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 11:41:28,558 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 11:41:28,559 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 11:41:28,559 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 11:41:28,559 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 11:41:28,824 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 11:41:28,824 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 11:41:28,853 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 11:41:28,853 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 11:41:28,862 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 11:41:28,862 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 11:41:28,862 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 11:41:28,862 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 11:41:28,862 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@63355449 - End of configuration. [testng] 11:41:28,863 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48ae9b55 - Registering current configuration as safe fallback point [testng] 11:41:28,863 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 305 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-10 11:41:28,873] [main] java.version = 1.8.0_342 [testng] 11:41:28,877 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 11:41:28,877 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:41:28,923 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-10_11-41-28.log] [testng] 11:41:28,925 |-INFO in ch.qos.logback.core.sift.SiftProcessor@765d7657 - End of configuration. [testng] [2025-03-10 11:41:28,927] [main] testng.directory = /data [testng] [2025-03-10 11:41:28,927] [main] testng.configDirectory = /config [testng] [2025-03-10 11:41:28,940] [main] testng.multiplier = 1.0 [testng] [2025-03-10 11:41:28,940] [main] testng.in-memory = false [testng] [2025-03-10 11:41:28,941] [main] testng.allow-missing = false [testng] [2025-03-10 11:41:28,941] [main] user.language = fr [testng] [2025-03-10 11:41:28,941] [main] user.country = FR [testng] [2025-03-10 11:41:28,941] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2025-03-10 11:42:01,405] [main] ---------------------------------------- [testng] [2025-03-10 11:42:01,407] [main] Total files: 320 [testng] [2025-03-10 11:42:01,408] [main] Scan time: 32.464 s (101 ms/file) [testng] [2025-03-10 11:42:01,409] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 196 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-10 11:53:11,592] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir: [testng] 11:53:11,593 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 11:53:11,593 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:53:11,594 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-10_11-53-11.log] [testng] 11:53:11,594 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72f2bee2 - End of configuration. [testng] [2025-03-10 11:53:11,885] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: [testng] 11:53:11,885 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 11:53:11,885 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:53:11,886 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-10_11-53-11.log] [testng] 11:53:11,886 |-INFO in ch.qos.logback.core.sift.SiftProcessor@158288c2 - End of configuration. [testng] [2025-03-10 11:53:12,306] [pool-1-thread-11] Initializing /data/qa-16881/P10D1 20150729.ome.tif: [testng] 11:53:12,306 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 11:53:12,306 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:53:12,307 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-10_11-53-12.log] [testng] 11:53:12,308 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c0152b1 - End of configuration. [testng] [2025-03-10 11:53:12,665] [pool-1-thread-10] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: [testng] 11:53:12,666 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 11:53:12,666 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:53:12,667 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-10_11-53-12.log] [testng] 11:53:12,667 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7241fc1e - End of configuration. [testng] [2025-03-10 11:53:13,236] [pool-1-thread-9] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif: [testng] 11:53:13,237 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 11:53:13,237 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:53:13,237 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-10_11-53-13.log] [testng] 11:53:13,238 |-INFO in ch.qos.logback.core.sift.SiftProcessor@65823780 - End of configuration. [testng] [2025-03-10 11:53:13,887] [pool-1-thread-8] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: [testng] 11:53:13,887 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 11:53:13,887 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:53:13,888 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-10_11-53-13.log] [testng] 11:53:13,888 |-INFO in ch.qos.logback.core.sift.SiftProcessor@38b14e9a - End of configuration. [testng] [2025-03-10 11:53:14,223] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: [testng] 11:53:14,224 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 11:53:14,224 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:53:14,224 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-10_11-53-14.log] [testng] 11:53:14,225 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7d1d886f - End of configuration. [testng] [2025-03-10 11:53:14,975] [pool-1-thread-6] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif: [testng] 11:53:14,975 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 11:53:14,975 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:53:14,976 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-10_11-53-14.log] [testng] 11:53:14,976 |-INFO in ch.qos.logback.core.sift.SiftProcessor@26e68435 - End of configuration. [testng] [2025-03-10 11:53:15,693] [pool-1-thread-5] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir: [testng] 11:53:15,693 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 11:53:15,693 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:53:15,694 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-10_11-53-15.log] [testng] 11:53:15,694 |-INFO in ch.qos.logback.core.sift.SiftProcessor@757c7935 - End of configuration. [testng] [2025-03-10 11:53:16,110] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: [testng] 11:53:16,111 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 11:53:16,111 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:53:16,111 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-10_11-53-16.log] [testng] 11:53:16,112 |-INFO in ch.qos.logback.core.sift.SiftProcessor@688a3892 - End of configuration. [testng] [2025-03-10 11:53:16,596] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif: [testng] 11:53:16,597 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 11:53:16,597 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:53:16,598 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-10_11-53-16.log] [testng] 11:53:16,598 |-INFO in ch.qos.logback.core.sift.SiftProcessor@210536fb - End of configuration. [testng] [2025-03-10 11:53:17,332] [pool-1-thread-2] Initializing /data/qa-17335/1.ome.tif: [testng] 11:53:17,332 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 11:53:17,332 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:53:17,333 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-10_11-53-17.log] [testng] 11:53:17,333 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21e6d10f - End of configuration. [testng] [2025-03-10 11:53:23,415] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: [testng] [2025-03-10 11:53:23,890] [pool-1-thread-11] Initializing /data/olympus/XYZt.oir: [testng] [2025-03-10 11:53:26,303] [pool-1-thread-4] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: [testng] [2025-03-10 11:53:26,844] [pool-1-thread-5] Initializing /data/public/gh-4205/zenodo-13680725/matl.omp2info: [testng] [2025-03-10 11:53:36,470] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: [testng] [2025-03-10 11:53:37,241] [pool-1-thread-6] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: [testng] [2025-03-10 11:53:37,934] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: [testng] [2025-03-10 11:53:38,345] [pool-1-thread-10] Initializing /data/qa-17270/Clipboard-alexa488.tif: [testng] [2025-03-10 11:53:39,009] [pool-1-thread-9] Initializing /data/olympus/40X_4CH_XY.vsi: [testng] [2025-03-10 11:53:39,254] [pool-1-thread-2] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif: [testng] [2025-03-10 11:53:39,732] [pool-1-thread-7] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: [testng] [2025-03-10 11:53:43,656] [pool-1-thread-9] Initializing /data/qa-17409/Clipboard.tif: [testng] [2025-03-10 11:53:44,370] [pool-1-thread-2] Initializing /data/qa-17331/60x zstack RS.oir: [testng] [2025-03-10 11:53:45,057] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: [testng] [2025-03-10 11:53:45,528] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif: [testng] [2025-03-10 11:53:46,335] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif: [testng] [2025-03-10 11:53:46,822] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: [testng] [2025-03-10 11:53:47,527] [pool-1-thread-10] Initializing /data/olympus/calcium sparks_XYt.vsi: [testng] [2025-03-10 11:53:47,777] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: [testng] [2025-03-10 11:53:48,185] [pool-1-thread-8] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif: [testng] [2025-03-10 11:53:51,488] [pool-1-thread-3] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir: [testng] [2025-03-10 11:53:52,002] [pool-1-thread-10] Initializing /data/olympus/calcium sparks_XYt.oir: [testng] [2025-03-10 11:53:53,693] [pool-1-thread-9] Initializing /data/qa-17270/Clipboard-stack1.tif: [testng] [2025-03-10 11:53:54,826] [pool-1-thread-7] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: [testng] [2025-03-10 11:53:56,290] [pool-1-thread-1] Initializing /data/qa-17270/alexa488.oir: [testng] [2025-03-10 11:53:56,711] [pool-1-thread-8] Initializing /data/qa-17270/stack1.oir: [testng] [2025-03-10 11:54:02,377] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: [testng] [2025-03-10 11:54:02,871] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: [testng] [2025-03-10 11:54:03,456] [pool-1-thread-2] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_22Lambda-420-630-w10nm-s10nm.oir: [testng] [2025-03-10 11:54:07,787] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif: [testng] [2025-03-10 11:54:08,902] [pool-1-thread-6] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif: [testng] [2025-03-10 11:54:09,312] [pool-1-thread-9] Initializing /data/olympus/spectral_scan_XYL.oir: [testng] [2025-03-10 11:54:14,042] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif: [testng] [2025-03-10 11:54:15,719] [pool-1-thread-4] Initializing /data/qa-16881/P10D1 20150729_0019.oir: [testng] [2025-03-10 11:54:17,449] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: [testng] [2025-03-10 11:54:20,218] [pool-1-thread-6] Initializing /data/olympus/calcium sparks_XYt.ome.tif: [testng] [2025-03-10 11:54:20,644] [pool-1-thread-3] Initializing /data/public/etienne/venus stack.oir: [testng] [2025-03-10 11:54:24,872] [pool-1-thread-12] Initializing /data/qa-17922/example_multipart.oir: [testng] [2025-03-10 11:54:59,237] [pool-1-thread-7] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif: [testng] [2025-03-10 11:55:01,130] [pool-1-thread-6] Initializing /data/olympus/XYZt.ome.tif: [testng] [2025-03-10 11:55:03,702] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif: [testng] [2025-03-10 11:55:04,138] [pool-1-thread-7] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: [testng] [2025-03-10 11:55:10,976] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi: [testng] [2025-03-10 11:55:11,361] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: [testng] [2025-03-10 11:55:13,671] [pool-1-thread-1] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif: [testng] [2025-03-10 11:55:15,009] [pool-1-thread-4] Initializing /data/olympus/Clipboard-XYZt.tif: [testng] [2025-03-10 11:55:15,958] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: [testng] [2025-03-10 11:55:17,401] [pool-1-thread-6] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: [testng] [2025-03-10 11:55:18,753] [pool-1-thread-1] Initializing /data/qa-17270/alexa488.ome.tif: [testng] [2025-03-10 11:55:20,359] [pool-1-thread-2] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif: [testng] [2025-03-10 11:55:21,840] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif: [testng] [2025-03-10 11:55:23,782] [pool-1-thread-10] Initializing /data/public/imagesc-105684/1202-interval_10sec_sequence_frame.oir: [testng] [2025-03-10 11:55:25,702] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir: [testng] [2025-03-10 11:55:31,597] [pool-1-thread-1] Initializing /data/olympus/40X_4CH_XY.ome.tif: [testng] [2025-03-10 11:55:32,848] [pool-1-thread-2] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: [testng] [2025-03-10 11:55:33,976] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif: [testng] [2025-03-10 11:55:38,964] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif: [testng] [2025-03-10 11:55:39,794] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif: [testng] [2025-03-10 11:55:42,785] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/zebra shg.oir: [testng] [2025-03-10 11:55:50,494] [pool-1-thread-9] Initializing /data/public/etienne/venus stack.ome.tif: [testng] [2025-03-10 11:55:50,979] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif: [testng] [2025-03-10 11:55:53,265] [pool-1-thread-4] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info: [testng] [2025-03-10 11:55:53,577] [pool-1-thread-1] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir: [testng] [2025-03-10 11:55:53,978] [pool-1-thread-10] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.vsi: [testng] [2025-03-10 11:55:55,068] [pool-1-thread-3] Initializing /data/qa-17919/f10187.oir: [testng] [2025-03-10 11:56:46,474] [pool-1-thread-9] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info: [testng] [2025-03-10 11:56:54,805] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: [testng] [2025-03-10 11:56:55,662] [pool-1-thread-11] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif: [testng] [2025-03-10 11:56:59,505] [pool-1-thread-10] Initializing /data/qa-16881/P10-50 D2.oir: [testng] [2025-03-10 11:57:00,514] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: [testng] [2025-03-10 11:57:01,616] [pool-1-thread-1] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: [testng] [2025-03-10 11:57:02,413] [pool-1-thread-6] Initializing /data/qa-17270/Clipboard-image1.tif: [testng] [2025-03-10 11:57:06,449] [pool-1-thread-11] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir: [testng] [2025-03-10 11:57:09,578] [pool-1-thread-7] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: [testng] [2025-03-10 11:57:14,081] [pool-1-thread-1] Initializing /data/qa-17335/Clipboard-1.tif: [testng] [2025-03-10 11:57:18,464] [pool-1-thread-6] Initializing /data/olympus/2017-04-20/Clipboard.tif: [testng] [2025-03-10 11:57:20,643] [pool-1-thread-10] Initializing /data/public/etienne/coupe shg stack_0001.oir: [testng] [2025-03-10 11:57:22,438] [pool-1-thread-8] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif: [testng] [2025-03-10 11:57:29,065] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: [testng] [2025-03-10 11:57:31,421] [pool-1-thread-6] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_4T_5Lambda-420-630-w10nm-s50nm.oir: [testng] [2025-03-10 11:57:34,425] [pool-1-thread-8] Initializing /data/qa-17331/60x zstack RS.ome.tif: [testng] [2025-03-10 11:57:37,698] [pool-1-thread-10] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: [testng] [2025-03-10 11:57:38,259] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: [testng] [2025-03-10 11:57:43,528] [pool-1-thread-8] Initializing /data/qa-17270/image1.ome.tif: [testng] [2025-03-10 11:57:47,642] [pool-1-thread-1] Initializing /data/qa-17409/Stitch_A01_G001.oir: [testng] [2025-03-10 11:57:55,232] [pool-1-thread-8] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir: [testng] [2025-03-10 11:57:59,958] [pool-1-thread-4] Initializing /data/public/imagesc-105684/1202-interval_30sec_sequence_frame.oir: [testng] [2025-03-10 11:58:01,124] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif: [testng] [2025-03-10 11:58:03,390] [pool-1-thread-10] Initializing /data/qa-17335/1.oir: [testng] [2025-03-10 11:58:07,480] [pool-1-thread-6] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif: [testng] [2025-03-10 11:58:11,735] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: [testng] [2025-03-10 11:58:13,067] [pool-1-thread-7] Initializing /data/olympus/40X_4CH_XY.oir: [testng] [2025-03-10 11:58:15,253] [pool-1-thread-1] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif: [testng] [2025-03-10 11:58:16,896] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir: [testng] [2025-03-10 11:58:25,235] [pool-1-thread-10] Initializing /data/qa-16871/Clipboard.tif: [testng] [2025-03-10 11:58:26,658] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir: [testng] [2025-03-10 11:58:28,806] [pool-1-thread-4] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: [testng] [2025-03-10 11:58:35,201] [pool-1-thread-4] Initializing /data/cudmore/20190401__0005.oir: [testng] [2025-03-10 11:58:54,309] [pool-1-thread-10] Initializing /data/qa-16881/P10-50 D2.ome.tif: [testng] [2025-03-10 11:59:01,227] [pool-1-thread-10] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif: [testng] [2025-03-10 11:59:06,889] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729.oir: [testng] [2025-03-10 11:59:15,346] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif: [testng] [2025-03-10 11:59:22,167] [pool-1-thread-6] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: [testng] [2025-03-10 11:59:24,610] [pool-1-thread-8] Initializing /data/qa-17331/Clipboard.tif: [testng] [2025-03-10 11:59:25,577] [pool-1-thread-10] Initializing /data/olympus/calcium sparks.jpg: [testng] [2025-03-10 11:59:29,807] [pool-1-thread-10] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir: [testng] [2025-03-10 11:59:32,921] [pool-1-thread-11] Initializing /data/qa-21508/Stitch_A01_G008.oir: [testng] [2025-03-10 11:59:33,459] [pool-1-thread-6] Initializing /data/qa-16871/XY_0003.oir: [testng] [2025-03-10 11:59:34,886] [pool-1-thread-8] Initializing /data/olympus/spectral_scan_XYL.ome.tif: [testng] [2025-03-10 11:59:41,607] [pool-1-thread-8] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir: [testng] [2025-03-10 12:01:38,610] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: [testng] [2025-03-10 12:01:40,434] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif: [testng] [2025-03-10 12:01:42,796] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: [testng] [2025-03-10 12:01:48,113] [pool-1-thread-6] Initializing /data/qa-17335/stimulation_0001_LSM.oir: [testng] [2025-03-10 12:01:50,507] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif: [testng] [2025-03-10 12:01:51,456] [pool-1-thread-11] Initializing /data/olympus/Stitched_XYZ.vsi: [testng] [2025-03-10 12:01:55,576] [pool-1-thread-11] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: [testng] [2025-03-10 12:01:56,371] [pool-1-thread-7] Initializing /data/qa-17335/OSR-Z.ome.tif: [testng] [2025-03-10 12:01:57,609] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif: [testng] [2025-03-10 12:02:00,409] [pool-1-thread-10] Initializing /data/olympus/XYZt.vsi: [testng] [2025-03-10 12:02:01,398] [pool-1-thread-7] Initializing /data/qa-17917/f10010.oir: [testng] [2025-03-10 12:03:02,149] [pool-1-thread-10] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif: [testng] [2025-03-10 12:03:02,625] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif: [testng] [2025-03-10 12:03:03,288] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: [testng] [2025-03-10 12:03:06,393] [pool-1-thread-10] Initializing /data/public/gh-4205/zenodo-13680725/Stitch_A01_G001.oir: [testng] [2025-03-10 12:03:07,638] [pool-1-thread-11] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: [testng] [2025-03-10 12:03:08,075] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: [testng] [2025-03-10 12:03:09,198] [pool-1-thread-6] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info: [testng] [2025-03-10 12:03:24,072] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir: [testng] [2025-03-10 12:03:24,977] [pool-1-thread-11] Initializing /data/qa-17270/image1.oir: [testng] [2025-03-10 12:03:27,969] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif: [testng] [2025-03-10 12:03:30,384] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir: [testng] [2025-03-10 12:03:31,442] [pool-1-thread-1] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: [testng] [2025-03-10 12:03:35,568] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir: [testng] [2025-03-10 12:03:38,967] [pool-1-thread-10] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif: [testng] [2025-03-10 12:03:40,185] [pool-1-thread-2] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: [testng] [2025-03-10 12:03:43,586] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: [testng] [2025-03-10 12:03:52,298] [pool-1-thread-2] Initializing /data/qa-17335/Clipboard-OSR-Z.tif: [testng] [2025-03-10 12:03:57,677] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: [testng] [2025-03-10 12:04:02,127] [pool-1-thread-2] Initializing /data/public/gh-4205/zenodo-12773657/DAPI-mCherry_3T_4Z_5Lambda-420-630-w10nm-s50nm.oir: [testng] [2025-03-10 12:04:18,996] [pool-1-thread-11] Initializing /data/qa-17293/Clipboard.tif: [testng] [2025-03-10 12:04:22,300] [pool-1-thread-10] Initializing /data/qa-16881/P10-50 D2_0019.oir: [testng] [2025-03-10 12:04:24,628] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir: [testng] [2025-03-10 12:04:40,243] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: [testng] [2025-03-10 12:04:41,705] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir: [testng] [2025-03-10 12:04:45,425] [pool-1-thread-10] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: [testng] [2025-03-10 12:04:51,831] [pool-1-thread-10] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: [testng] [2025-03-10 12:04:52,463] [pool-1-thread-10] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir: [testng] [2025-03-10 12:04:53,100] [pool-1-thread-11] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir: [testng] [2025-03-10 12:04:57,547] [pool-1-thread-11] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir: [testng] [2025-03-10 12:05:08,216] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir: [testng] [2025-03-10 12:05:09,589] [pool-1-thread-10] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif: [testng] [2025-03-10 12:05:11,923] [pool-1-thread-2] Initializing /data/public/imagesc-105684/1202-interval_30sec_sequence_frame_z stack.oir: [testng] [2025-03-10 12:05:17,363] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/Clipboard.tif: [testng] [2025-03-10 12:05:21,881] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir: [testng] [2025-03-10 12:05:25,059] [pool-1-thread-10] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: [testng] [2025-03-10 12:05:29,000] [pool-1-thread-10] Initializing /data/public/etienne/amy slice z stack_0001.oir: [testng] [2025-03-10 12:05:39,357] [pool-1-thread-10] Initializing /data/qa-16881/P10-50 D2_0006.oir: [testng] [2025-03-10 12:05:40,582] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: [testng] [2025-03-10 12:05:44,832] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif: [testng] [2025-03-10 12:05:45,617] [pool-1-thread-2] Initializing /data/olympus/Stitched_XYZ.ome.tif: [testng] [2025-03-10 12:05:50,743] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: [testng] [2025-03-10 12:05:51,953] [pool-1-thread-4] Initializing /data/qa-16871/XY_0003.ome.tif: [testng] [2025-03-10 12:05:53,840] [pool-1-thread-2] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_4Z_5Lambda-420-630-w10nm-s50nm.oir: [testng] [2025-03-10 12:05:58,874] [pool-1-thread-4] Initializing /data/public/etienne/Clipboard-venus stack.tif: [testng] [2025-03-10 12:06:01,260] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729_0024.oir: [testng] [2025-03-10 12:06:08,562] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: [testng] [2025-03-10 12:06:21,729] [pool-1-thread-10] Initializing /data/public/imagesc-105684/1202-interval_freeRun_sequence_frame.oir: [testng] [2025-03-10 12:06:29,261] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: [testng] [2025-03-10 12:06:36,011] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif: [testng] [2025-03-10 12:06:41,561] [pool-1-thread-4] Initializing /data/olympus/Stitched_XYZ.oir: [testng] [2025-03-10 12:06:44,394] [pool-1-thread-9] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: [testng] [2025-03-10 12:07:26,295] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif: [testng] [2025-03-10 12:07:28,080] [pool-1-thread-2] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: [testng] [2025-03-10 12:07:35,210] [pool-1-thread-10] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif: [testng] [2025-03-10 12:07:36,521] [pool-1-thread-2] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: [testng] [2025-03-10 12:07:42,301] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif: [testng] [2025-03-10 12:07:51,411] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: [testng] [2025-03-10 12:07:53,293] [pool-1-thread-10] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: [testng] [2025-03-10 12:07:55,849] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif: [testng] [2025-03-10 12:07:59,152] [pool-1-thread-4] Initializing /data/qa-17270/stack1.ome.tif: [testng] [2025-03-10 12:08:04,567] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif: [testng] [2025-03-10 12:08:05,547] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif: [testng] [2025-03-10 12:08:06,556] [pool-1-thread-4] Initializing /data/qa-17335/OSR-Z.oir: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 10388, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 68 minutes 12 seconds Finished: SUCCESS